RNA–Protein interactions for RNA: ENST00000482014.1

CHRD-213, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 560 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-213ENST00000482014 MAP3K9P80192 1104 aa20.22■□□□□ 0.83
CHRD-213ENST00000482014 EXOSC9Q06265 439 aaKnown RBP20.22■□□□□ 0.83
CHRD-213ENST00000482014 RAET1EQ8TD07 263 aa20.22■□□□□ 0.83
CHRD-213ENST00000482014 JARID2Q92833 1246 aaPredicted RBP20.22■□□□□ 0.83
CHRD-213ENST00000482014 TRIM47Q96LD4 638 aa20.22■□□□□ 0.83
CHRD-213ENST00000482014 CD209Q9NNX6 404 aa20.22■□□□□ 0.83
CHRD-213ENST00000482014 SRRDQ9UH36 339 aa20.22■□□□□ 0.83
CHRD-213ENST00000482014 FARP2O94887 1054 aaPredicted RBP20.21■□□□□ 0.83
CHRD-213ENST00000482014 CCL5P13501 91 aa20.21■□□□□ 0.83
CHRD-213ENST00000482014 KCNJ4P48050 445 aa20.21■□□□□ 0.83
CHRD-213ENST00000482014 FKBP1AP62942 108 aaKnown RBP20.21■□□□□ 0.83
CHRD-213ENST00000482014 UBXN2AP68543 259 aa20.21■□□□□ 0.83
CHRD-213ENST00000482014 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.21■□□□□ 0.83
CHRD-213ENST00000482014 RNF208Q9H0X6 261 aa20.21■□□□□ 0.83
CHRD-213ENST00000482014 GREM2Q9H772 168 aa20.21■□□□□ 0.83
CHRD-213ENST00000482014 RIPOR2Q9Y4F9 1068 aa20.21■□□□□ 0.83
CHRD-213ENST00000482014 NEXNQ0ZGT2 675 aa20.2■□□□□ 0.82
CHRD-213ENST00000482014 FLIIQ13045 1269 aa20.2■□□□□ 0.82
CHRD-213ENST00000482014 VGLL4Q14135 290 aa20.2■□□□□ 0.82
CHRD-213ENST00000482014 CERS5Q8N5B7 392 aa20.2■□□□□ 0.82
CHRD-213ENST00000482014 DEFB123Q8N688 67 aa20.2■□□□□ 0.82
CHRD-213ENST00000482014 CNKSR2Q8WXI2 1034 aa20.2■□□□□ 0.82
CHRD-213ENST00000482014 PCDHAC2Q9Y5I4 1007 aa20.2■□□□□ 0.82
CHRD-213ENST00000482014 ECM29Q5VYK3 1845 aa20.2■□□□□ 0.82
CHRD-213ENST00000482014 F8W031 263 aaPredicted RBP20.19■□□□□ 0.82
CHRD-213ENST00000482014 KLRK1P26718 216 aa20.19■□□□□ 0.82
CHRD-213ENST00000482014 RBM5P52756 815 aaKnown RBP eCLIP20.19■□□□□ 0.823e-12■■□□□ 13.4
CHRD-213ENST00000482014 COL25A1Q9BXS0 654 aaPredicted RBP20.19■□□□□ 0.82
CHRD-213ENST00000482014 BIN2Q9UBW5 565 aaPredicted RBP20.19■□□□□ 0.82
CHRD-213ENST00000482014 STAP2Q9UGK3 403 aa20.19■□□□□ 0.82
CHRD-213ENST00000482014 CACNA1FO60840 1977 aa20.19■□□□□ 0.82
CHRD-213ENST00000482014 SPDYE5A6NIY4 337 aa20.18■□□□□ 0.82
CHRD-213ENST00000482014 NEURL1BA8MQ27 555 aa20.18■□□□□ 0.82
CHRD-213ENST00000482014 PSMC4P43686 418 aa20.18■□□□□ 0.82
CHRD-213ENST00000482014 CWF19L2Q2TBE0 894 aaKnown RBP20.18■□□□□ 0.82
CHRD-213ENST00000482014 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.18■□□□□ 0.82
CHRD-213ENST00000482014 U2AF1L4Q8WU68 220 aaKnown RBP20.18■□□□□ 0.82
CHRD-213ENST00000482014 MYH16Q9H6N6 1097 aa20.18■□□□□ 0.82
CHRD-213ENST00000482014 ZNF521Q96K83 1311 aa20.18■□□□□ 0.82
CHRD-213ENST00000482014 BTBD19C9JJ37 291 aa20.17■□□□□ 0.82
CHRD-213ENST00000482014 H7C1W4 665 aa20.17■□□□□ 0.82
CHRD-213ENST00000482014 BMP8BP34820 402 aa20.17■□□□□ 0.82
CHRD-213ENST00000482014 SNAPC2Q13487 334 aa20.17■□□□□ 0.82
CHRD-213ENST00000482014 C17orf99Q6UX52 265 aa20.17■□□□□ 0.82
CHRD-213ENST00000482014 MPHOSPH8Q99549 860 aa20.17■□□□□ 0.82
CHRD-213ENST00000482014 OSBPP22059 807 aa20.16■□□□□ 0.82
CHRD-213ENST00000482014 SPDYE2Q495Y8 402 aa20.16■□□□□ 0.82
CHRD-213ENST00000482014 ERO1BQ86YB8 467 aa20.16■□□□□ 0.82
CHRD-213ENST00000482014 FMNL1O95466 1100 aaPredicted RBP20.15■□□□□ 0.82
CHRD-213ENST00000482014 SGPL1O95470 568 aa20.15■□□□□ 0.82
CHRD-213ENST00000482014 TNNI2P48788 182 aa20.15■□□□□ 0.82
CHRD-213ENST00000482014 FKBP5Q13451 457 aaPredicted RBP20.15■□□□□ 0.82
CHRD-213ENST00000482014 C15orf52Q6ZUT6 534 aaKnown RBP20.15■□□□□ 0.82
CHRD-213ENST00000482014 DNAAF4Q8WXU2 420 aa20.15■□□□□ 0.82
CHRD-213ENST00000482014 TEPSINQ96N21 525 aa20.15■□□□□ 0.82
CHRD-213ENST00000482014 ZNF70Q9UC06 446 aaPredicted RBP20.15■□□□□ 0.82
CHRD-213ENST00000482014 MYPNQ86TC9 1320 aa20.15■□□□□ 0.82
CHRD-213ENST00000482014 OTOFQ9HC10 1997 aa20.15■□□□□ 0.82
CHRD-213ENST00000482014 GCKRQ14397 625 aa20.14■□□□□ 0.81
CHRD-213ENST00000482014 ZNF804AQ7Z570 1209 aa20.14■□□□□ 0.81
CHRD-213ENST00000482014 SLAIN1Q8ND83 568 aa20.14■□□□□ 0.81
CHRD-213ENST00000482014 AOX1Q06278 1338 aa20.13■□□□□ 0.81
CHRD-213ENST00000482014 IL1R1P14778 569 aa20.13■□□□□ 0.81
CHRD-213ENST00000482014 LINS1Q8NG48 757 aa20.13■□□□□ 0.81
CHRD-213ENST00000482014 MTMR10Q9NXD2 777 aa20.13■□□□□ 0.81
CHRD-213ENST00000482014 ITGA6P23229 1130 aa20.12■□□□□ 0.81
CHRD-213ENST00000482014 CTGFP29279 349 aa20.12■□□□□ 0.81
CHRD-213ENST00000482014 CASP7P55210 303 aa20.12■□□□□ 0.81
CHRD-213ENST00000482014 CHRNDQ07001 517 aa20.12■□□□□ 0.81
CHRD-213ENST00000482014 LRIT3Q3SXY7 679 aa20.12■□□□□ 0.81
CHRD-213ENST00000482014 UBE3BQ7Z3V4 1068 aa20.12■□□□□ 0.81
CHRD-213ENST00000482014 GDF15Q99988 308 aa20.12■□□□□ 0.81
CHRD-213ENST00000482014 PLA2G12BQ9BX93 195 aa20.12■□□□□ 0.81
CHRD-213ENST00000482014 CPA4Q9UI42 421 aa20.12■□□□□ 0.81
CHRD-213ENST00000482014 SERPINA10Q9UK55 444 aa20.12■□□□□ 0.81
CHRD-213ENST00000482014 MYH3P11055 1940 aa20.12■□□□□ 0.81
CHRD-213ENST00000482014 ZSWIM8A7E2V4 1837 aa20.11■□□□□ 0.81
CHRD-213ENST00000482014 IRF6O14896 467 aa20.11■□□□□ 0.81
CHRD-213ENST00000482014 ECM2O94769 699 aaPredicted RBP20.11■□□□□ 0.81
CHRD-213ENST00000482014 PPIL2Q13356 520 aa20.11■□□□□ 0.81
CHRD-213ENST00000482014 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.11■□□□□ 0.81
CHRD-213ENST00000482014 TDRD3Q9H7E2 651 aaKnown RBP20.11■□□□□ 0.81
CHRD-213ENST00000482014 TFRCP02786 760 aaKnown RBP20.1■□□□□ 0.81
CHRD-213ENST00000482014 Q7L0L9 218 aa20.1■□□□□ 0.81
CHRD-213ENST00000482014 HOOK2Q96ED9 719 aa20.1■□□□□ 0.81
CHRD-213ENST00000482014 UNC93B1Q9H1C4 597 aa20.1■□□□□ 0.81
CHRD-213ENST00000482014 SNCAIPQ9Y6H5 919 aa20.1■□□□□ 0.81
CHRD-213ENST00000482014 SPEF2Q9C093 1822 aa20.1■□□□□ 0.81
CHRD-213ENST00000482014 IRS2Q9Y4H2 1338 aa20.09■□□□□ 0.81
CHRD-213ENST00000482014 TCP10L2B9ZVM9 353 aa20.09■□□□□ 0.81
CHRD-213ENST00000482014 F6X3S4 739 aa20.09■□□□□ 0.81
CHRD-213ENST00000482014 FCGRTP55899 365 aa20.09■□□□□ 0.81
CHRD-213ENST00000482014 BEND3Q5T5X7 828 aa20.09■□□□□ 0.81
CHRD-213ENST00000482014 ANKRD23Q86SG2 305 aa20.09■□□□□ 0.81
CHRD-213ENST00000482014 TMEM39BQ9GZU3 492 aa20.09■□□□□ 0.81
CHRD-213ENST00000482014 UNC80Q8N2C7 3258 aa20.09■□□□□ 0.81
CHRD-213ENST00000482014 CSF1RP07333 972 aa20.08■□□□□ 0.81
CHRD-213ENST00000482014 CDAN1Q8IWY9 1227 aa20.08■□□□□ 0.81
CHRD-213ENST00000482014 DZIP1LQ8IYY4 767 aaKnown RBP20.08■□□□□ 0.81
CHRD-213ENST00000482014 WRNIP1Q96S55 665 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms