RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 RLBP1P12271 317 aa11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 IL15P40933 162 aaPredicted RBP11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 ATP2B3Q16720 1220 aa11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 DEFB129Q9H1M3 183 aa11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 C1orf115Q9H7X2 142 aa11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 GNL3LQ9NVN8 582 aaKnown RBP11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 MYH2Q9UKX2 1941 aa11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 ZBED9Q6R2W3 1325 aa11.32□□□□□ -0.6
SRGAP3-206ENST00000480750 UBE2Q2LH0YL09 131 aa11.31□□□□□ -0.6
SRGAP3-206ENST00000480750 GNAI2P04899 355 aa11.31□□□□□ -0.6
SRGAP3-206ENST00000480750 SLC10A3P09131 477 aa11.31□□□□□ -0.6
SRGAP3-206ENST00000480750 KCNA4P22459 653 aa11.31□□□□□ -0.6
SRGAP3-206ENST00000480750 KIF23Q02241 960 aaPredicted RBP11.31□□□□□ -0.6
SRGAP3-206ENST00000480750 TNFAIP1Q13829 316 aa11.31□□□□□ -0.6
SRGAP3-206ENST00000480750 ZBED3Q96IU2 234 aaPredicted RBP11.31□□□□□ -0.6
SRGAP3-206ENST00000480750 PRMT6Q96LA8 375 aaPredicted RBP11.31□□□□□ -0.6
SRGAP3-206ENST00000480750 SERPINA10Q9UK55 444 aa11.31□□□□□ -0.6
SRGAP3-206ENST00000480750 PPP2R3BQ9Y5P8 575 aa11.31□□□□□ -0.6
SRGAP3-206ENST00000480750 MAST3O60307 1309 aa11.31□□□□□ -0.6
SRGAP3-206ENST00000480750 FAM155AB1AL88 458 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 PPP1R12BO60237 982 aaPredicted RBP11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 FGFR2P21802 821 aa11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 ADORA1P30542 326 aa11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 CRKP46108 304 aa11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 TNNI2P48788 182 aa11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 SUPT20HL1Q3ZLR7 823 aa11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 PANK1Q8TE04 598 aa11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 TEKT1Q969V4 418 aa11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 TDRD3Q9H7E2 651 aaKnown RBP11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 COPRSQ9NQ92 184 aa11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 TMOD2Q9NZR1 351 aa11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 ANGEL1Q9UNK9 670 aaKnown RBP11.3□□□□□ -0.6
SRGAP3-206ENST00000480750 PNMA6EA0A0J9YXQ4 647 aa11.29□□□□□ -0.6
SRGAP3-206ENST00000480750 TIMM10P62072 90 aa11.29□□□□□ -0.6
SRGAP3-206ENST00000480750 CACNB1Q02641 598 aaPredicted RBP11.29□□□□□ -0.6
SRGAP3-206ENST00000480750 RASAL3Q86YV0 1011 aa11.29□□□□□ -0.6
SRGAP3-206ENST00000480750 REM2Q8IYK8 340 aaPredicted RBP11.29□□□□□ -0.6
SRGAP3-206ENST00000480750 DZIP1LQ8IYY4 767 aaKnown RBP11.29□□□□□ -0.6
SRGAP3-206ENST00000480750 WDR66Q8TBY9 1149 aa11.29□□□□□ -0.6
SRGAP3-206ENST00000480750 OTOFQ9HC10 1997 aa11.28□□□□□ -0.6
SRGAP3-206ENST00000480750 TFCP2Q12800 502 aa11.28□□□□□ -0.6
SRGAP3-206ENST00000480750 MKRN3Q13064 507 aaKnown RBP11.28□□□□□ -0.6
SRGAP3-206ENST00000480750 G3BP1Q13283 466 aaKnown RBP eCLIP11.28□□□□□ -0.6
SRGAP3-206ENST00000480750 RASA3Q14644 834 aa11.28□□□□□ -0.6
SRGAP3-206ENST00000480750 SPDYE2Q495Y8 402 aa11.28□□□□□ -0.6
SRGAP3-206ENST00000480750 ITPRIPQ8IWB1 547 aa11.28□□□□□ -0.6
SRGAP3-206ENST00000480750 CDAN1Q8IWY9 1227 aa11.28□□□□□ -0.6
SRGAP3-206ENST00000480750 ZNF70Q9UC06 446 aaPredicted RBP11.28□□□□□ -0.6
SRGAP3-206ENST00000480750 AKAP2Q9Y2D5 859 aa11.28□□□□□ -0.6
SRGAP3-206ENST00000480750 SUGT1Q9Y2Z0 365 aa11.28□□□□□ -0.6
SRGAP3-206ENST00000480750 TCP10L2B9ZVM9 353 aa11.27□□□□□ -0.61
SRGAP3-206ENST00000480750 TRPA1O75762 1119 aa11.27□□□□□ -0.61
SRGAP3-206ENST00000480750 PHKA1P46020 1223 aa11.27□□□□□ -0.61
SRGAP3-206ENST00000480750 IREB2P48200 963 aaKnown RBP11.27□□□□□ -0.61
SRGAP3-206ENST00000480750 CACNB3P54284 484 aa11.27□□□□□ -0.61
SRGAP3-206ENST00000480750 HDLBPQ00341 1268 aaKnown RBP11.27□□□□□ -0.61
SRGAP3-206ENST00000480750 OS9Q13438 667 aaPredicted RBP11.27□□□□□ -0.61
SRGAP3-206ENST00000480750 GORABQ5T7V8 394 aa11.27□□□□□ -0.61
SRGAP3-206ENST00000480750 SLC10A4Q96EP9 437 aa11.27□□□□□ -0.61
SRGAP3-206ENST00000480750 NEUROD6Q96NK8 337 aa11.27□□□□□ -0.61
SRGAP3-206ENST00000480750 DENND2AQ9ULE3 1009 aa11.27□□□□□ -0.61
SRGAP3-206ENST00000480750 A0A1B0GUL7 405 aa11.26□□□□□ -0.61
SRGAP3-206ENST00000480750 SEMA3EO15041 775 aa11.26□□□□□ -0.61
SRGAP3-206ENST00000480750 LDHBP07195 334 aaKnown RBP11.26□□□□□ -0.61
SRGAP3-206ENST00000480750 SREBF2Q12772 1141 aa11.26□□□□□ -0.61
SRGAP3-206ENST00000480750 MTX1Q13505 466 aa11.26□□□□□ -0.61
SRGAP3-206ENST00000480750 NBPF12Q5TAG4 269 aaPredicted RBP11.26□□□□□ -0.61
SRGAP3-206ENST00000480750 ZGPATQ8N5A5 531 aaKnown RBP11.26□□□□□ -0.61
SRGAP3-206ENST00000480750 CSRNP1Q96S65 589 aa11.26□□□□□ -0.61
SRGAP3-206ENST00000480750 SAGE1Q9NXZ1 904 aa11.26□□□□□ -0.61
SRGAP3-206ENST00000480750 MS4A1P11836 297 aa11.25□□□□□ -0.61
SRGAP3-206ENST00000480750 MVPQ14764 893 aaKnown RBP11.25□□□□□ -0.61
SRGAP3-206ENST00000480750 CCDC102BQ68D86 513 aa11.25□□□□□ -0.61
SRGAP3-206ENST00000480750 ZDHHC15Q96MV8 337 aa11.25□□□□□ -0.61
SRGAP3-206ENST00000480750 RNF186Q9NXI6 227 aa11.25□□□□□ -0.61
SRGAP3-206ENST00000480750 SSC5DA1L4H1 1573 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 LAMB1P07942 1786 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 DOCK2Q92608 1830 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 ZBTB7BO15156 539 aaPredicted RBP11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 DIXDC1Q155Q3 683 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 HHIPL2Q6UWX4 724 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 DZIP1Q86YF9 867 aaKnown RBP11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 ANKRD13AQ8IZ07 590 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 HOOK2Q96ED9 719 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 XAGE2Q96GT9 111 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 MRIQ9BWK5 157 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 TMEM39BQ9GZU3 492 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 RNF39Q9H2S5 420 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 ABCF2Q9UG63 623 aa11.24□□□□□ -0.61
SRGAP3-206ENST00000480750 USP2O75604 605 aaPredicted RBP11.23□□□□□ -0.61
SRGAP3-206ENST00000480750 PRDX5P30044 214 aa11.23□□□□□ -0.61
SRGAP3-206ENST00000480750 ATP8B2P98198 1209 aa11.23□□□□□ -0.61
SRGAP3-206ENST00000480750 MAP3K11Q16584 847 aa11.23□□□□□ -0.61
SRGAP3-206ENST00000480750 LDLRAD1Q5T700 205 aa11.23□□□□□ -0.61
SRGAP3-206ENST00000480750 C20orf194Q5TEA3 1177 aa11.23□□□□□ -0.61
SRGAP3-206ENST00000480750 SPTY2D1Q68D10 685 aaPredicted RBP11.23□□□□□ -0.61
SRGAP3-206ENST00000480750 PI16Q6UXB8 463 aa11.23□□□□□ -0.61
SRGAP3-206ENST00000480750 SLF2Q8IX21 1173 aa11.23□□□□□ -0.61
SRGAP3-206ENST00000480750 CLMNQ96JQ2 1002 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms