RNA–Protein interactions for RNA: ENST00000479381.5

CMTM1-208, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 995 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-208ENST00000479381 PDE8BO95263 885 aa11.28□□□□□ -0.6
CMTM1-208ENST00000479381 GNAI2P04899 355 aa11.28□□□□□ -0.6
CMTM1-208ENST00000479381 TRIM27P14373 513 aa11.28□□□□□ -0.6
CMTM1-208ENST00000479381 MAP2K1Q02750 393 aaPredicted RBP11.28□□□□□ -0.6
CMTM1-208ENST00000479381 MKRN3Q13064 507 aaKnown RBP11.28□□□□□ -0.6
CMTM1-208ENST00000479381 PRKG1Q13976 671 aa11.28□□□□□ -0.6
CMTM1-208ENST00000479381 CFAP100Q494V2 611 aa11.28□□□□□ -0.6
CMTM1-208ENST00000479381 CST9Q5W186 159 aa11.28□□□□□ -0.6
CMTM1-208ENST00000479381 APOBEC3FQ8IUX4 373 aaKnown RBP11.28□□□□□ -0.6
CMTM1-208ENST00000479381 PGAP2Q9UHJ9 254 aa11.28□□□□□ -0.6
CMTM1-208ENST00000479381 TTF2Q9UNY4 1162 aaKnown RBP11.28□□□□□ -0.6
CMTM1-208ENST00000479381 CEP350Q5VT06 3117 aa11.27□□□□□ -0.6
CMTM1-208ENST00000479381 MYH13Q9UKX3 1938 aa11.27□□□□□ -0.6
CMTM1-208ENST00000479381 CLRN2A0PK11 232 aa11.27□□□□□ -0.61
CMTM1-208ENST00000479381 WNT10BO00744 389 aa11.27□□□□□ -0.61
CMTM1-208ENST00000479381 AOC2O75106 756 aa11.27□□□□□ -0.61
CMTM1-208ENST00000479381 IL1R1P14778 569 aa11.27□□□□□ -0.61
CMTM1-208ENST00000479381 MMP14P50281 582 aa11.27□□□□□ -0.61
CMTM1-208ENST00000479381 ZNF157P51786 506 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-208ENST00000479381 BRPF1P55201 1214 aaPredicted RBP11.27□□□□□ -0.61
CMTM1-208ENST00000479381 ATP2B3Q16720 1220 aa11.27□□□□□ -0.61
CMTM1-208ENST00000479381 C15orf52Q6ZUT6 534 aaKnown RBP11.27□□□□□ -0.61
CMTM1-208ENST00000479381 SAPCD2Q86UD0 394 aa11.27□□□□□ -0.61
CMTM1-208ENST00000479381 GNL3LQ9NVN8 582 aaKnown RBP11.27□□□□□ -0.61
CMTM1-208ENST00000479381 PA2G4Q9UQ80 394 aaKnown RBP11.27□□□□□ -0.61
CMTM1-208ENST00000479381 RIPOR2Q9Y4F9 1068 aa11.27□□□□□ -0.61
CMTM1-208ENST00000479381 ZNF609O15014 1411 aa11.26□□□□□ -0.61
CMTM1-208ENST00000479381 CTCFP49711 727 aaPredicted RBP11.26□□□□□ -0.61
CMTM1-208ENST00000479381 GORABQ5T7V8 394 aa11.26□□□□□ -0.61
CMTM1-208ENST00000479381 PRAMEF18Q5VWM3 479 aa11.26□□□□□ -0.61
CMTM1-208ENST00000479381 INTS3Q68E01 1043 aaKnown RBP11.26□□□□□ -0.61
CMTM1-208ENST00000479381 RGMBQ6NW40 437 aa11.26□□□□□ -0.61
CMTM1-208ENST00000479381 DZIP1LQ8IYY4 767 aaKnown RBP11.26□□□□□ -0.61
CMTM1-208ENST00000479381 TMEM57Q8N5G2 664 aa11.26□□□□□ -0.61
CMTM1-208ENST00000479381 TBC1D22AQ8WUA7 517 aa11.26□□□□□ -0.61
CMTM1-208ENST00000479381 LPIN2Q92539 896 aa11.26□□□□□ -0.61
CMTM1-208ENST00000479381 FAM84BQ96KN1 310 aaPredicted RBP11.26□□□□□ -0.61
CMTM1-208ENST00000479381 GMLQ99445 158 aa11.26□□□□□ -0.61
CMTM1-208ENST00000479381 TMOD2Q9NZR1 351 aa11.26□□□□□ -0.61
CMTM1-208ENST00000479381 TNNQ9UQP3 1299 aa11.26□□□□□ -0.61
CMTM1-208ENST00000479381 PITPNM2Q9BZ72 1349 aa11.26□□□□□ -0.61
CMTM1-208ENST00000479381 PLCG2P16885 1265 aa11.25□□□□□ -0.61
CMTM1-208ENST00000479381 IL15P40933 162 aaPredicted RBP11.25□□□□□ -0.61
CMTM1-208ENST00000479381 BCAMP50895 628 aa11.25□□□□□ -0.61
CMTM1-208ENST00000479381 PTPN12Q05209 780 aaKnown RBP11.25□□□□□ -0.61
CMTM1-208ENST00000479381 G3BP1Q13283 466 aaKnown RBP eCLIP11.25□□□□□ -0.61
CMTM1-208ENST00000479381 ARMC9Q7Z3E5 817 aa11.25□□□□□ -0.61
CMTM1-208ENST00000479381 TNS4Q8IZW8 715 aa11.25□□□□□ -0.61
CMTM1-208ENST00000479381 TDRD7Q8NHU6 1098 aaKnown RBP11.25□□□□□ -0.61
CMTM1-208ENST00000479381 NEUROD6Q96NK8 337 aa11.25□□□□□ -0.61
CMTM1-208ENST00000479381 BCL11AQ9H165 835 aa11.25□□□□□ -0.61
CMTM1-208ENST00000479381 FOXN1O15353 648 aa11.24□□□□□ -0.61
CMTM1-208ENST00000479381 TNNI2P48788 182 aa11.24□□□□□ -0.61
CMTM1-208ENST00000479381 FKBP1AP62942 108 aaKnown RBP11.24□□□□□ -0.61
CMTM1-208ENST00000479381 NOGQ13253 232 aa11.24□□□□□ -0.61
CMTM1-208ENST00000479381 CERS5Q8N5B7 392 aa11.24□□□□□ -0.61
CMTM1-208ENST00000479381 C1orf115Q9H7X2 142 aa11.24□□□□□ -0.61
CMTM1-208ENST00000479381 MAST3O60307 1309 aa11.24□□□□□ -0.61
CMTM1-208ENST00000479381 CIAO1O76071 339 aa11.23□□□□□ -0.61
CMTM1-208ENST00000479381 MS4A1P11836 297 aa11.23□□□□□ -0.61
CMTM1-208ENST00000479381 RFX5P48382 616 aaPredicted RBP11.23□□□□□ -0.61
CMTM1-208ENST00000479381 LBX1P52954 281 aa11.23□□□□□ -0.61
CMTM1-208ENST00000479381 TNFAIP1Q13829 316 aa11.23□□□□□ -0.61
CMTM1-208ENST00000479381 TEKT1Q969V4 418 aa11.23□□□□□ -0.61
CMTM1-208ENST00000479381 CCDC102AQ96A19 550 aa11.23□□□□□ -0.61
CMTM1-208ENST00000479381 RNF25Q96BH1 459 aaPredicted RBP11.23□□□□□ -0.61
CMTM1-208ENST00000479381 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
CMTM1-208ENST00000479381 ANGEL1Q9UNK9 670 aaKnown RBP11.23□□□□□ -0.61
CMTM1-208ENST00000479381 AKAP2Q9Y2D5 859 aa11.23□□□□□ -0.61
CMTM1-208ENST00000479381 FAM205AQ6ZU69 1335 aa11.23□□□□□ -0.61
CMTM1-208ENST00000479381 TCP10L2B9ZVM9 353 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 UBE2Q2LH0YL09 131 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 ZNF646O15015 1829 aaPredicted RBP11.22□□□□□ -0.61
CMTM1-208ENST00000479381 PPP1R12BO60237 982 aaPredicted RBP11.22□□□□□ -0.61
CMTM1-208ENST00000479381 MAP2K2P36507 400 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 CRKP46108 304 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 FKBP1BP68106 108 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 COL13A1Q5TAT6 717 aaPredicted RBP11.22□□□□□ -0.61
CMTM1-208ENST00000479381 ECM29Q5VYK3 1845 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 MOB2Q70IA6 237 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 FBXO33Q7Z6M2 555 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 VGLL2Q8N8G2 317 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 WDR66Q8TBY9 1149 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 ARAP2Q8WZ64 1704 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 HHIPL1Q96JK4 782 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 YTHDC1Q96MU7 727 aaKnown RBP11.22□□□□□ -0.61
CMTM1-208ENST00000479381 PAPPA2Q9BXP8 1791 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 DEFB129Q9H1M3 183 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 TDRD3Q9H7E2 651 aaKnown RBP11.22□□□□□ -0.61
CMTM1-208ENST00000479381 IRS2Q9Y4H2 1338 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 PCDHAC2Q9Y5I4 1007 aa11.22□□□□□ -0.61
CMTM1-208ENST00000479381 TFCP2Q12800 502 aa11.21□□□□□ -0.61
CMTM1-208ENST00000479381 SUPT20HL1Q3ZLR7 823 aa11.21□□□□□ -0.61
CMTM1-208ENST00000479381 ATG9AQ7Z3C6 839 aa11.21□□□□□ -0.61
CMTM1-208ENST00000479381 DZIP1Q86YF9 867 aaKnown RBP11.21□□□□□ -0.61
CMTM1-208ENST00000479381 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.21□□□□□ -0.61
CMTM1-208ENST00000479381 PRMT6Q96LA8 375 aaPredicted RBP11.21□□□□□ -0.61
CMTM1-208ENST00000479381 COPRSQ9NQ92 184 aa11.21□□□□□ -0.61
CMTM1-208ENST00000479381 WBP1LQ9NX94 342 aa11.21□□□□□ -0.61
CMTM1-208ENST00000479381 ABCF2Q9UG63 623 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms