RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, human

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKB-208	ENST00000479003	HSPD1	P10809	573 aa	Known RBP	32.38	■■■□□ 2.77
CHKB-208	ENST00000479003	SCRN1	Q12765	414 aa		32.38	■■■□□ 2.77
CHKB-208	ENST00000479003	TTC39A	Q5SRH9	613 aa		32.38	■■■□□ 2.77
CHKB-208	ENST00000479003	SPATA32	Q96LK8	384 aa		32.38	■■■□□ 2.77
CHKB-208	ENST00000479003	AGXT2	Q9BYV1	514 aa		32.38	■■■□□ 2.77
CHKB-208	ENST00000479003	POLRMT	O00411	1230 aa	Known RBP	32.37	■■■□□ 2.77
CHKB-208	ENST00000479003	EXOSC10	Q01780	885 aa	Known RBP	32.37	■■■□□ 2.77
CHKB-208	ENST00000479003	REST	Q13127	1097 aa		32.37	■■■□□ 2.77
CHKB-208	ENST00000479003	LEO1	Q8WVC0	666 aa	Predicted RBP	32.37	■■■□□ 2.77
CHKB-208	ENST00000479003	LPIN2	Q92539	896 aa		32.37	■■■□□ 2.77
CHKB-208	ENST00000479003	BSDC1	Q9NW68	430 aa	Predicted RBP	32.37	■■■□□ 2.77
CHKB-208	ENST00000479003	KDM4A	O75164	1064 aa		32.36	■■■□□ 2.77
CHKB-208	ENST00000479003	ADCY5	O95622	1261 aa		32.36	■■■□□ 2.77
CHKB-208	ENST00000479003	LRRC2	Q9BYS8	371 aa		32.36	■■■□□ 2.77
CHKB-208	ENST00000479003	ARAP2	Q8WZ64	1704 aa		32.36	■■■□□ 2.77
CHKB-208	ENST00000479003	LIG1	P18858	919 aa		32.36	■■■□□ 2.77
CHKB-208	ENST00000479003	SCARF1	Q14162	830 aa		32.36	■■■□□ 2.77
CHKB-208	ENST00000479003	MYH15	Q9Y2K3	1946 aa		32.35	■■■□□ 2.77
CHKB-208	ENST00000479003	TERF1	P54274	439 aa		32.35	■■■□□ 2.77
CHKB-208	ENST00000479003	FGD1	P98174	961 aa		32.35	■■■□□ 2.77
CHKB-208	ENST00000479003		A0A1B0GUL6	1792 aa		32.35	■■■□□ 2.77
CHKB-208	ENST00000479003	CCDC192	P0DO97	292 aa		32.35	■■■□□ 2.77
CHKB-208	ENST00000479003	NUP62CL	Q9H1M0	184 aa		32.35	■■■□□ 2.77
CHKB-208	ENST00000479003	TFIP11	Q9UBB9	837 aa	Known RBP	32.35	■■■□□ 2.77
CHKB-208	ENST00000479003	FLAD1	Q8NFF5	587 aa		32.34	■■■□□ 2.77
CHKB-208	ENST00000479003	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	32.34	■■■□□ 2.77
CHKB-208	ENST00000479003	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	32.34	■■■□□ 2.77
CHKB-208	ENST00000479003		E7EWF7	191 aa		32.33	■■■□□ 2.77
CHKB-208	ENST00000479003	RPS8	P62241	208 aa	Known RBP	32.33	■■■□□ 2.77
CHKB-208	ENST00000479003	MAP3K11	Q16584	847 aa		32.33	■■■□□ 2.77
CHKB-208	ENST00000479003	ST5	P78524	1137 aa		32.32	■■■□□ 2.76
CHKB-208	ENST00000479003	PI16	Q6UXB8	463 aa		32.32	■■■□□ 2.76
CHKB-208	ENST00000479003		H3BQV1	296 aa		32.32	■■■□□ 2.76
CHKB-208	ENST00000479003		M0R2C6	588 aa		32.32	■■■□□ 2.76
CHKB-208	ENST00000479003	SLC5A1	P13866	664 aa		32.32	■■■□□ 2.76
CHKB-208	ENST00000479003	FKBP4	Q02790	459 aa	Known RBP eCLIP	32.32	■■■□□ 2.76
CHKB-208	ENST00000479003	IFFO2	Q5TF58	517 aa		32.32	■■■□□ 2.76
CHKB-208	ENST00000479003	NSUN7	Q8NE18	718 aa	Known RBP	32.32	■■■□□ 2.76
CHKB-208	ENST00000479003	MINPP1	Q9UNW1	487 aa		32.32	■■■□□ 2.76
CHKB-208	ENST00000479003	GOLGA6L4	A6NEF3	574 aa		32.31	■■■□□ 2.76
CHKB-208	ENST00000479003	PHKA1	P46020	1223 aa		32.31	■■■□□ 2.76
CHKB-208	ENST00000479003	LRRFIP1	Q32MZ4	808 aa	Known RBP	32.31	■■■□□ 2.76
CHKB-208	ENST00000479003	CCDC102B	Q68D86	513 aa		32.31	■■■□□ 2.76
CHKB-208	ENST00000479003	NLGN1	Q8N2Q7	840 aa		32.31	■■■□□ 2.76
CHKB-208	ENST00000479003	DDX11	Q96FC9	970 aa		32.31	■■■□□ 2.76
CHKB-208	ENST00000479003	MCAM	P43121	646 aa		32.3	■■■□□ 2.76
CHKB-208	ENST00000479003	DDX19A	Q9NUU7	478 aa	Known RBP	32.3	■■■□□ 2.76
CHKB-208	ENST00000479003	APOBR	Q0VD83	1088 aa		32.3	■■■□□ 2.76
CHKB-208	ENST00000479003	DEFB132	Q7Z7B7	95 aa		32.3	■■■□□ 2.76
CHKB-208	ENST00000479003	AKAP11	Q9UKA4	1901 aa		32.29	■■■□□ 2.76
CHKB-208	ENST00000479003		A0A0G2JLW4	131 aa		32.29	■■■□□ 2.76
CHKB-208	ENST00000479003	WTIP	A6NIX2	430 aa	Predicted RBP	32.29	■■■□□ 2.76
CHKB-208	ENST00000479003	HMGN5	P82970	282 aa	Known RBP	32.29	■■■□□ 2.76
CHKB-208	ENST00000479003	OSBP2	Q969R2	916 aa		32.29	■■■□□ 2.76
CHKB-208	ENST00000479003	CTDNEP1	O95476	244 aa		32.29	■■■□□ 2.76
CHKB-208	ENST00000479003	SLC15A2	Q16348	729 aa		32.29	■■■□□ 2.76
CHKB-208	ENST00000479003	NAA16	Q6N069	864 aa	Predicted RBP	32.29	■■■□□ 2.76
CHKB-208	ENST00000479003	DACT1	Q9NYF0	836 aa		32.29	■■■□□ 2.76
CHKB-208	ENST00000479003	RRP9	O43818	475 aa	Known RBP	32.28	■■■□□ 2.76
CHKB-208	ENST00000479003	ZFY	P08048	801 aa	Predicted RBP	32.28	■■■□□ 2.76
CHKB-208	ENST00000479003	ZAP70	P43403	619 aa		32.28	■■■□□ 2.76
CHKB-208	ENST00000479003	MYH7	P12883	1935 aa		32.28	■■■□□ 2.76
CHKB-208	ENST00000479003	MSL1	Q68DK7	614 aa		32.27	■■■□□ 2.76
CHKB-208	ENST00000479003	RBM43	Q6ZSC3	357 aa	Known RBP	32.27	■■■□□ 2.76
CHKB-208	ENST00000479003	PGBD1	Q96JS3	809 aa		32.27	■■■□□ 2.76
CHKB-208	ENST00000479003	CRY2	Q49AN0	593 aa		32.27	■■■□□ 2.76
CHKB-208	ENST00000479003	FBXL16	Q8N461	479 aa		32.27	■■■□□ 2.76
CHKB-208	ENST00000479003	ZNF512B	Q96KM6	892 aa	Predicted RBP	32.27	■■■□□ 2.76
CHKB-208	ENST00000479003	TNMD	Q9H2S6	317 aa		32.27	■■■□□ 2.76
CHKB-208	ENST00000479003	KIAA2012	Q0VF49	1180 aa		32.26	■■■□□ 2.76
CHKB-208	ENST00000479003	SF3B2	Q13435	895 aa	Known RBP	32.26	■■■□□ 2.76
CHKB-208	ENST00000479003	ZNF274	Q96GC6	653 aa	Predicted RBP	32.26	■■■□□ 2.76
CHKB-208	ENST00000479003	CFAP45	Q9UL16	551 aa		32.26	■■■□□ 2.76
CHKB-208	ENST00000479003	KIF3A	Q9Y496	699 aa		32.26	■■■□□ 2.76
CHKB-208	ENST00000479003	PTPDC1	A2A3K4	754 aa		32.26	■■■□□ 2.75
CHKB-208	ENST00000479003	ARID4A	P29374	1257 aa	Predicted RBP	32.26	■■■□□ 2.75
CHKB-208	ENST00000479003	CAMK4	Q16566	473 aa		32.26	■■■□□ 2.75
CHKB-208	ENST00000479003	SLC51A	Q86UW1	340 aa		32.26	■■■□□ 2.75
CHKB-208	ENST00000479003	CLSTN2	Q9H4D0	955 aa		32.26	■■■□□ 2.75
CHKB-208	ENST00000479003	SALL1	Q9NSC2	1324 aa		32.25	■■■□□ 2.75
CHKB-208	ENST00000479003	TYRO3	Q06418	890 aa		32.25	■■■□□ 2.75
CHKB-208	ENST00000479003	FAM200A	Q8TCP9	573 aa		32.25	■■■□□ 2.75
CHKB-208	ENST00000479003	MRVI1	Q9Y6F6	885 aa		32.25	■■■□□ 2.75
CHKB-208	ENST00000479003	BAG6	P46379	1132 aa		32.24	■■■□□ 2.75
CHKB-208	ENST00000479003	CTNNA3	Q9UI47	895 aa		32.24	■■■□□ 2.75
CHKB-208	ENST00000479003	NRXN2	Q9P2S2	1712 aa		32.24	■■■□□ 2.75
CHKB-208	ENST00000479003	MMP10	P09238	476 aa		32.24	■■■□□ 2.75
CHKB-208	ENST00000479003	GRAP	Q13588	217 aa		32.24	■■■□□ 2.75
CHKB-208	ENST00000479003	GRAPL	Q8TC17	118 aa	Predicted RBP	32.24	■■■□□ 2.75
CHKB-208	ENST00000479003	CHMP4C	Q96CF2	233 aa		32.24	■■■□□ 2.75
CHKB-208	ENST00000479003	AP5Z1	O43299	807 aa		32.23	■■■□□ 2.75
CHKB-208	ENST00000479003	BCAM	P50895	628 aa		32.23	■■■□□ 2.75
CHKB-208	ENST00000479003	TTLL5	Q6EMB2	1281 aa		32.23	■■■□□ 2.75
CHKB-208	ENST00000479003	STK32B	Q9NY57	414 aa		32.23	■■■□□ 2.75
CHKB-208	ENST00000479003	R3HCC1	Q9Y3T6	440 aa	Known RBP	32.23	■■■□□ 2.75
CHKB-208	ENST00000479003	PDIA3	P30101	505 aa	Known RBP	32.23	■■■□□ 2.75
CHKB-208	ENST00000479003	RPGR	Q92834	1020 aa	Known RBP	32.23	■■■□□ 2.75
CHKB-208	ENST00000479003	FOXP2	O15409	715 aa		32.22	■■■□□ 2.75
CHKB-208	ENST00000479003	ADD1	P35611	737 aa	Known RBP	32.22	■■■□□ 2.75
CHKB-208	ENST00000479003	EVC	P57679	992 aa		32.22	■■■□□ 2.75

Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms