RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TEKT1Q969V4 418 aa18.05■□□□□ 0.48
SMARCE1-209ENST00000478349 HOOK2Q96ED9 719 aa18.05■□□□□ 0.48
SMARCE1-209ENST00000478349 CFHR5Q9BXR6 569 aa18.05■□□□□ 0.48
SMARCE1-209ENST00000478349 ZNF70Q9UC06 446 aaPredicted RBP18.05■□□□□ 0.48
SMARCE1-209ENST00000478349 CRKP46108 304 aa18.04■□□□□ 0.48
SMARCE1-209ENST00000478349 RGS19P49795 217 aa18.04■□□□□ 0.48
SMARCE1-209ENST00000478349 DZIP1LQ8IYY4 767 aaKnown RBP18.04■□□□□ 0.48
SMARCE1-209ENST00000478349 VGLL2Q8N8G2 317 aa18.04■□□□□ 0.48
SMARCE1-209ENST00000478349 EYA2O00167 538 aa18.03■□□□□ 0.48
SMARCE1-209ENST00000478349 TBC1D8O95759 1140 aa18.03■□□□□ 0.48
SMARCE1-209ENST00000478349 LPIN2Q92539 896 aa18.03■□□□□ 0.48
SMARCE1-209ENST00000478349 AKAP11Q9UKA4 1901 aa18.03■□□□□ 0.48
SMARCE1-209ENST00000478349 SSC5DA1L4H1 1573 aa18.02■□□□□ 0.48
SMARCE1-209ENST00000478349 GPR25O00155 361 aa18.02■□□□□ 0.48
SMARCE1-209ENST00000478349 NBPF12Q5TAG4 269 aaPredicted RBP18.02■□□□□ 0.48
SMARCE1-209ENST00000478349 WDR66Q8TBY9 1149 aa18.02■□□□□ 0.48
SMARCE1-209ENST00000478349 ZNF296Q8WUU4 475 aaPredicted RBP18.02■□□□□ 0.48
SMARCE1-209ENST00000478349 CDCA7LQ96GN5 454 aa18.02■□□□□ 0.48
SMARCE1-209ENST00000478349 WNK4Q96J92 1243 aa18.02■□□□□ 0.48
SMARCE1-209ENST00000478349 TDRD3Q9H7E2 651 aaKnown RBP18.02■□□□□ 0.48
SMARCE1-209ENST00000478349 GNL3LQ9NVN8 582 aaKnown RBP18.02■□□□□ 0.48
SMARCE1-209ENST00000478349 IQSEC3Q9UPP2 1182 aaPredicted RBP18.02■□□□□ 0.48
SMARCE1-209ENST00000478349 PCDHAC2Q9Y5I4 1007 aa18.02■□□□□ 0.48
SMARCE1-209ENST00000478349 FKTNO75072 461 aa18.01■□□□□ 0.47
SMARCE1-209ENST00000478349 CIAO1O76071 339 aa18.01■□□□□ 0.47
SMARCE1-209ENST00000478349 TRMT2AQ8IZ69 625 aaKnown RBP18.01■□□□□ 0.47
SMARCE1-209ENST00000478349 MRIQ9BWK5 157 aa18.01■□□□□ 0.47
SMARCE1-209ENST00000478349 ARAP2Q8WZ64 1704 aa18.01■□□□□ 0.47
SMARCE1-209ENST00000478349 CASP8AP2Q9UKL3 1982 aa18■□□□□ 0.47
SMARCE1-209ENST00000478349 IFNL1Q8IU54 200 aa18■□□□□ 0.47
SMARCE1-209ENST00000478349 KLHDC4Q8TBB5 520 aa18■□□□□ 0.47
SMARCE1-209ENST00000478349 ZBTB4Q9P1Z0 1013 aaPredicted RBP18■□□□□ 0.47
SMARCE1-209ENST00000478349 CEP126Q9P2H0 1117 aa18■□□□□ 0.47
SMARCE1-209ENST00000478349 CSADQ9Y600 493 aa18■□□□□ 0.47
SMARCE1-209ENST00000478349 ECM29Q5VYK3 1845 aa18■□□□□ 0.47
SMARCE1-209ENST00000478349 TCP10L2B9ZVM9 353 aa17.99■□□□□ 0.47
SMARCE1-209ENST00000478349 WDHD1O75717 1129 aaPredicted RBP17.99■□□□□ 0.47
SMARCE1-209ENST00000478349 FGFR2P21802 821 aa17.99■□□□□ 0.47
SMARCE1-209ENST00000478349 BCAMP50895 628 aa17.99■□□□□ 0.47
SMARCE1-209ENST00000478349 FKBP1CQ5VVH2 108 aa17.99■□□□□ 0.47
SMARCE1-209ENST00000478349 CLMNQ96JQ2 1002 aa17.99■□□□□ 0.47
SMARCE1-209ENST00000478349 ZDHHC15Q96MV8 337 aa17.99■□□□□ 0.47
SMARCE1-209ENST00000478349 NOB1Q9ULX3 412 aaKnown RBP17.99■□□□□ 0.47
SMARCE1-209ENST00000478349 IPO8O15397 1037 aaKnown RBP17.98■□□□□ 0.47
SMARCE1-209ENST00000478349 USP2O75604 605 aaPredicted RBP17.98■□□□□ 0.47
SMARCE1-209ENST00000478349 IL15P40933 162 aaPredicted RBP17.98■□□□□ 0.47
SMARCE1-209ENST00000478349 ATP2B3Q16720 1220 aa17.98■□□□□ 0.47
SMARCE1-209ENST00000478349 FAM83AQ86UY5 434 aa17.98■□□□□ 0.47
SMARCE1-209ENST00000478349 ARHGAP45Q92619 1136 aa17.98■□□□□ 0.47
SMARCE1-209ENST00000478349 FZD1Q9UP38 647 aa17.98■□□□□ 0.47
SMARCE1-209ENST00000478349 SEMA3EO15041 775 aa17.97■□□□□ 0.47
SMARCE1-209ENST00000478349 GNAI3P08754 354 aa17.97■□□□□ 0.47
SMARCE1-209ENST00000478349 RFX5P48382 616 aaPredicted RBP17.97■□□□□ 0.47
SMARCE1-209ENST00000478349 DCAF15Q66K64 600 aa17.97■□□□□ 0.47
SMARCE1-209ENST00000478349 FBXO46Q6PJ61 603 aaPredicted RBP17.97■□□□□ 0.47
SMARCE1-209ENST00000478349 HHIPL2Q6UWX4 724 aa17.97■□□□□ 0.47
SMARCE1-209ENST00000478349 RPAP1Q9BWH6 1393 aaPredicted RBP17.96■□□□□ 0.47
SMARCE1-209ENST00000478349 MAP3K9P80192 1104 aa17.96■□□□□ 0.47
SMARCE1-209ENST00000478349 ZGPATQ8N5A5 531 aaKnown RBP17.96■□□□□ 0.47
SMARCE1-209ENST00000478349 OPTNQ96CV9 577 aa17.96■□□□□ 0.47
SMARCE1-209ENST00000478349 TMEM39BQ9GZU3 492 aa17.96■□□□□ 0.47
SMARCE1-209ENST00000478349 SIL1Q9H173 461 aa17.96■□□□□ 0.47
SMARCE1-209ENST00000478349 ELP3Q9H9T3 547 aa17.96■□□□□ 0.47
SMARCE1-209ENST00000478349 HPS5Q9UPZ3 1129 aa17.96■□□□□ 0.47
SMARCE1-209ENST00000478349 AOX1Q06278 1338 aa17.96■□□□□ 0.46
SMARCE1-209ENST00000478349 GTF2A2P52657 109 aa17.95■□□□□ 0.46
SMARCE1-209ENST00000478349 RARSP54136 660 aaKnown RBP17.95■□□□□ 0.46
SMARCE1-209ENST00000478349 ERO1AQ96HE7 468 aa17.95■□□□□ 0.46
SMARCE1-209ENST00000478349 TEPSINQ96N21 525 aa17.95■□□□□ 0.46
SMARCE1-209ENST00000478349 DENND2AQ9ULE3 1009 aa17.95■□□□□ 0.46
SMARCE1-209ENST00000478349 LRRFIP2Q9Y608 721 aaKnown RBP17.95■□□□□ 0.46
SMARCE1-209ENST00000478349 ARHGEF6Q15052 776 aa17.94■□□□□ 0.46
SMARCE1-209ENST00000478349 ATG9AQ7Z3C6 839 aa17.94■□□□□ 0.46
SMARCE1-209ENST00000478349 IGF2BP3O00425 579 aaKnown RBP eCLIP17.93■□□□□ 0.46
SMARCE1-209ENST00000478349 LDHBP07195 334 aaKnown RBP17.93■□□□□ 0.46
SMARCE1-209ENST00000478349 SOX10P56693 466 aa17.93■□□□□ 0.46
SMARCE1-209ENST00000478349 VGLL4Q14135 290 aa17.93■□□□□ 0.46
SMARCE1-209ENST00000478349 SLF2Q8IX21 1173 aa17.93■□□□□ 0.46
SMARCE1-209ENST00000478349 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.93■□□□□ 0.46
SMARCE1-209ENST00000478349 COPRSQ9NQ92 184 aa17.93■□□□□ 0.46
SMARCE1-209ENST00000478349 AKAP2Q9Y2D5 859 aa17.93■□□□□ 0.46
SMARCE1-209ENST00000478349 SALL1Q9NSC2 1324 aa17.93■□□□□ 0.46
SMARCE1-209ENST00000478349 TESPA1A2RU30 521 aaPredicted RBP17.92■□□□□ 0.46
SMARCE1-209ENST00000478349 GRIK5Q16478 980 aa17.92■□□□□ 0.46
SMARCE1-209ENST00000478349 INTS3Q68E01 1043 aaKnown RBP17.92■□□□□ 0.46
SMARCE1-209ENST00000478349 APOBEC3HQ6NTF7 200 aaKnown RBP17.92■□□□□ 0.46
SMARCE1-209ENST00000478349 WRNIP1Q96S55 665 aa17.92■□□□□ 0.46
SMARCE1-209ENST00000478349 SPDYE5A6NIY4 337 aa17.91■□□□□ 0.46
SMARCE1-209ENST00000478349 ZBTB22O15209 634 aa17.91■□□□□ 0.46
SMARCE1-209ENST00000478349 CACNB3P54284 484 aa17.91■□□□□ 0.46
SMARCE1-209ENST00000478349 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.91■□□□□ 0.46
SMARCE1-209ENST00000478349 ERO1BQ86YB8 467 aa17.91■□□□□ 0.46
SMARCE1-209ENST00000478349 OTUD5Q96G74 571 aa17.91■□□□□ 0.46
SMARCE1-209ENST00000478349 MEIS3Q99687 375 aa17.91■□□□□ 0.46
SMARCE1-209ENST00000478349 CCL15-CCL14A0A0B4J2E2 113 aa17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 SRGAP3O43295 1099 aa17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 CETPP11597 493 aa17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 GJA5P36382 358 aa17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 CRHR2Q13324 411 aa17.9■□□□□ 0.46
SMARCE1-209ENST00000478349 MVPQ14764 893 aaKnown RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms