RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 USP50Q70EL3 339 aaPredicted RBP8.39□□□□□ -1.07
LINC00173-202ENST00000477702 RTKN2Q8IZC4 609 aa8.39□□□□□ -1.07
LINC00173-202ENST00000477702 PHTF2Q8N3S3 785 aa8.39□□□□□ -1.07
LINC00173-202ENST00000477702 KCTD15Q96SI1 283 aaPredicted RBP8.39□□□□□ -1.07
LINC00173-202ENST00000477702 SETDB2Q96T68 719 aa8.39□□□□□ -1.07
LINC00173-202ENST00000477702 LGR6Q9HBX8 967 aa8.39□□□□□ -1.07
LINC00173-202ENST00000477702 ANKRD26Q9UPS8 1709 aa8.39□□□□□ -1.07
LINC00173-202ENST00000477702 A0A0C4DFX4 3053 aa8.39□□□□□ -1.07
LINC00173-202ENST00000477702 COL4A5P29400 1685 aa8.38□□□□□ -1.07
LINC00173-202ENST00000477702 J3QL48 77 aa8.38□□□□□ -1.07
LINC00173-202ENST00000477702 TRPA1O75762 1119 aa8.38□□□□□ -1.07
LINC00173-202ENST00000477702 ALDH1A1P00352 501 aa8.38□□□□□ -1.07
LINC00173-202ENST00000477702 NPR1P16066 1061 aa8.38□□□□□ -1.07
LINC00173-202ENST00000477702 NOGQ13253 232 aa8.38□□□□□ -1.07
LINC00173-202ENST00000477702 DLK2Q6UY11 383 aa8.38□□□□□ -1.07
LINC00173-202ENST00000477702 CTU1Q7Z7A3 348 aaKnown RBP8.38□□□□□ -1.07
LINC00173-202ENST00000477702 CCDC85AQ96PX6 553 aaPredicted RBP8.38□□□□□ -1.07
LINC00173-202ENST00000477702 CDK15Q96Q40 435 aa8.38□□□□□ -1.07
LINC00173-202ENST00000477702 SLC52A2Q9HAB3 445 aa8.38□□□□□ -1.07
LINC00173-202ENST00000477702 TFIP11Q9UBB9 837 aaKnown RBP8.38□□□□□ -1.07
LINC00173-202ENST00000477702 ESPNB1AK53 854 aa8.37□□□□□ -1.07
LINC00173-202ENST00000477702 DLL1O00548 723 aa8.37□□□□□ -1.07
LINC00173-202ENST00000477702 STARD3NLO95772 234 aa8.37□□□□□ -1.07
LINC00173-202ENST00000477702 NR3C2P08235 984 aa8.37□□□□□ -1.07
LINC00173-202ENST00000477702 FSHRP23945 695 aa8.37□□□□□ -1.07
LINC00173-202ENST00000477702 FXR1P51114 621 aaKnown RBP eCLIP8.37□□□□□ -1.07
LINC00173-202ENST00000477702 HUNKP57058 714 aa8.37□□□□□ -1.07
LINC00173-202ENST00000477702 INTS6LQ5JSJ4 861 aaKnown RBP8.37□□□□□ -1.07
LINC00173-202ENST00000477702 NBPF5PQ86XG9 351 aaPredicted RBP8.37□□□□□ -1.07
LINC00173-202ENST00000477702 RNF135Q8IUD6 432 aa8.37□□□□□ -1.07
LINC00173-202ENST00000477702 CCDC97Q96F63 343 aaPredicted RBP8.37□□□□□ -1.07
LINC00173-202ENST00000477702 HHIPL1Q96JK4 782 aa8.37□□□□□ -1.07
LINC00173-202ENST00000477702 PPP1R12CQ9BZL4 782 aa8.37□□□□□ -1.07
LINC00173-202ENST00000477702 RNF186Q9NXI6 227 aa8.37□□□□□ -1.07
LINC00173-202ENST00000477702 ARFGEF2Q9Y6D5 1785 aa8.36□□□□□ -1.07
LINC00173-202ENST00000477702 CEP290O15078 2479 aa8.36□□□□□ -1.07
LINC00173-202ENST00000477702 PALM3A6NDB9 673 aaPredicted RBP8.36□□□□□ -1.07
LINC00173-202ENST00000477702 CAMTA2O94983 1202 aa8.36□□□□□ -1.07
LINC00173-202ENST00000477702 SKIP12755 728 aa8.36□□□□□ -1.07
LINC00173-202ENST00000477702 RFX1P22670 979 aa8.36□□□□□ -1.07
LINC00173-202ENST00000477702 KIF23Q02241 960 aaPredicted RBP8.36□□□□□ -1.07
LINC00173-202ENST00000477702 SLFNL1Q499Z3 407 aa8.36□□□□□ -1.07
LINC00173-202ENST00000477702 SLC51AQ86UW1 340 aa8.36□□□□□ -1.07
LINC00173-202ENST00000477702 DEPDC4Q8N2C3 294 aa8.36□□□□□ -1.07
LINC00173-202ENST00000477702 LARGE2Q8N3Y3 721 aa8.36□□□□□ -1.07
LINC00173-202ENST00000477702 SERPINA10Q9UK55 444 aa8.36□□□□□ -1.07
LINC00173-202ENST00000477702 MAP4K5Q9Y4K4 846 aa8.36□□□□□ -1.07
LINC00173-202ENST00000477702 TRIOBPQ9H2D6 2365 aa8.36□□□□□ -1.07
LINC00173-202ENST00000477702 FAM177BA6PVY3 158 aa8.35□□□□□ -1.07
LINC00173-202ENST00000477702 FAM155AB1AL88 458 aaPredicted RBP8.35□□□□□ -1.07
LINC00173-202ENST00000477702 ADH1CP00326 375 aa8.35□□□□□ -1.07
LINC00173-202ENST00000477702 MCCD1P59942 119 aaPredicted RBP8.35□□□□□ -1.07
LINC00173-202ENST00000477702 NBPF20Q3BBV1 942 aa8.35□□□□□ -1.07
LINC00173-202ENST00000477702 AKAP4Q5JQC9 854 aa8.35□□□□□ -1.07
LINC00173-202ENST00000477702 SULT6B1Q6IMI4 303 aa8.35□□□□□ -1.07
LINC00173-202ENST00000477702 SNIP1Q8TAD8 396 aaKnown RBP8.35□□□□□ -1.07
LINC00173-202ENST00000477702 ADARB2Q9NS39 739 aaKnown RBP8.35□□□□□ -1.07
LINC00173-202ENST00000477702 TOR4AQ9NXH8 423 aa8.35□□□□□ -1.07
LINC00173-202ENST00000477702 SAGE1Q9NXZ1 904 aa8.35□□□□□ -1.07
LINC00173-202ENST00000477702 GPRC5DQ9NZD1 345 aa8.35□□□□□ -1.07
LINC00173-202ENST00000477702 SCN7AQ01118 1682 aa8.34□□□□□ -1.07
LINC00173-202ENST00000477702 TTC24A2A3L6 582 aaPredicted RBP8.34□□□□□ -1.07
LINC00173-202ENST00000477702 TCERG1O14776 1098 aaKnown RBP8.34□□□□□ -1.07
LINC00173-202ENST00000477702 RNMTO43148 476 aaKnown RBP8.34□□□□□ -1.07
LINC00173-202ENST00000477702 A1BGP04217 495 aa8.34□□□□□ -1.07
LINC00173-202ENST00000477702 USP48Q86UV5 1035 aa8.34□□□□□ -1.07
LINC00173-202ENST00000477702 CYP4X1Q8N118 509 aa8.34□□□□□ -1.07
LINC00173-202ENST00000477702 PSMD1Q99460 953 aa8.34□□□□□ -1.07
LINC00173-202ENST00000477702 TMPRSS4Q9NRS4 437 aa8.34□□□□□ -1.07
LINC00173-202ENST00000477702 SCN11AQ9UI33 1791 aa8.34□□□□□ -1.07
LINC00173-202ENST00000477702 BCORQ6W2J9 1755 aa8.33□□□□□ -1.08
LINC00173-202ENST00000477702 ERVH48-1M5A8F1 160 aa8.33□□□□□ -1.08
LINC00173-202ENST00000477702 ATP9BO43861 1147 aa8.33□□□□□ -1.08
LINC00173-202ENST00000477702 SMPD1P17405 629 aa8.33□□□□□ -1.08
LINC00173-202ENST00000477702 PIP4K2AP48426 406 aaPredicted RBP8.33□□□□□ -1.08
LINC00173-202ENST00000477702 GMPSP49915 693 aaPredicted RBP8.33□□□□□ -1.08
LINC00173-202ENST00000477702 HIRAP54198 1017 aaPredicted RBP8.33□□□□□ -1.08
LINC00173-202ENST00000477702 RGMBQ6NW40 437 aa8.33□□□□□ -1.08
LINC00173-202ENST00000477702 NPM2Q86SE8 214 aaKnown RBP8.33□□□□□ -1.08
LINC00173-202ENST00000477702 NIM1KQ8IY84 436 aa8.33□□□□□ -1.08
LINC00173-202ENST00000477702 MPNDQ8N594 471 aa8.33□□□□□ -1.08
LINC00173-202ENST00000477702 PLPP7Q8NBV4 271 aa8.33□□□□□ -1.08
LINC00173-202ENST00000477702 TRPM4Q8TD43 1214 aa8.33□□□□□ -1.08
LINC00173-202ENST00000477702 CDV3Q9UKY7 258 aaKnown RBP8.33□□□□□ -1.08
LINC00173-202ENST00000477702 PCDHB11Q9Y5F2 797 aa8.33□□□□□ -1.08
LINC00173-202ENST00000477702 MAFBQ9Y5Q3 323 aaPredicted RBP8.33□□□□□ -1.08
LINC00173-202ENST00000477702 SHTN1A0MZ66 631 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 KLRG2A4D1S0 409 aaPredicted RBP8.32□□□□□ -1.08
LINC00173-202ENST00000477702 RGS20O76081 388 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 ALDH1B1P30837 517 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 IL6STP40189 918 aaPredicted RBP8.32□□□□□ -1.08
LINC00173-202ENST00000477702 ZNF157P51786 506 aaPredicted RBP8.32□□□□□ -1.08
LINC00173-202ENST00000477702 PRR20EP86478 221 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 PRR20CP86479 221 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 PRR20DP86480 221 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 PRR20BP86481 221 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 PRR20AP86496 221 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 CDCA8Q53HL2 280 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 TRAF7Q6Q0C0 670 aa8.32□□□□□ -1.08
LINC00173-202ENST00000477702 CDC37L1Q7L3B6 337 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms