RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 F8W031 263 aaPredicted RBP16.03■□□□□ 0.16
TOP3A-205ENST00000477508 HIRAP54198 1017 aaPredicted RBP16.03■□□□□ 0.16
TOP3A-205ENST00000477508 ANKRD45Q5TZF3 282 aa16.03■□□□□ 0.16
TOP3A-205ENST00000477508 SLF2Q8IX21 1173 aa16.03■□□□□ 0.16
TOP3A-205ENST00000477508 MYO1BO43795 1136 aa16.02■□□□□ 0.16
TOP3A-205ENST00000477508 SMARCA5O60264 1052 aaPredicted RBP16.02■□□□□ 0.16
TOP3A-205ENST00000477508 SCARF1Q14162 830 aa16.02■□□□□ 0.16
TOP3A-205ENST00000477508 ERICH6Q7L0X2 663 aa16.02■□□□□ 0.16
TOP3A-205ENST00000477508 TEKT1Q969V4 418 aa16.02■□□□□ 0.16
TOP3A-205ENST00000477508 ABCF2Q9UG63 623 aa16.02■□□□□ 0.16
TOP3A-205ENST00000477508 ADAMTSL1Q8N6G6 1762 aa16.02■□□□□ 0.15
TOP3A-205ENST00000477508 PITPNM2Q9BZ72 1349 aa16.01■□□□□ 0.15
TOP3A-205ENST00000477508 WNT10BO00744 389 aa16.01■□□□□ 0.15
TOP3A-205ENST00000477508 IGHDP01880 384 aa16.01■□□□□ 0.15
TOP3A-205ENST00000477508 POTEIP0CG38 1075 aa16.01■□□□□ 0.15
TOP3A-205ENST00000477508 POTEJP0CG39 1038 aa16.01■□□□□ 0.15
TOP3A-205ENST00000477508 ATP5JP18859 108 aa16.01■□□□□ 0.15
TOP3A-205ENST00000477508 CRKP46108 304 aa16.01■□□□□ 0.15
TOP3A-205ENST00000477508 RBM5P52756 815 aaKnown RBP eCLIP16.01■□□□□ 0.15
TOP3A-205ENST00000477508 CFAP100Q494V2 611 aa16.01■□□□□ 0.15
TOP3A-205ENST00000477508 TMED8Q6PL24 325 aaPredicted RBP16.01■□□□□ 0.15
TOP3A-205ENST00000477508 HHIPL2Q6UWX4 724 aa16.01■□□□□ 0.15
TOP3A-205ENST00000477508 CNTROBQ8N137 903 aa16.01■□□□□ 0.15
TOP3A-205ENST00000477508 DCPSQ96C86 337 aaKnown RBP16.01■□□□□ 0.15
TOP3A-205ENST00000477508 ZBED3Q96IU2 234 aaPredicted RBP16.01■□□□□ 0.15
TOP3A-205ENST00000477508 BCL11AQ9H165 835 aa16.01■□□□□ 0.15
TOP3A-205ENST00000477508 SPDYE2BA6NHP3 402 aa16■□□□□ 0.15
TOP3A-205ENST00000477508 EGFRP00533 1210 aa16■□□□□ 0.15
TOP3A-205ENST00000477508 SPDYE6P0CI01 402 aa16■□□□□ 0.15
TOP3A-205ENST00000477508 PRDX5P30044 214 aa16■□□□□ 0.15
TOP3A-205ENST00000477508 GSTO1P78417 241 aa16■□□□□ 0.15
TOP3A-205ENST00000477508 TTF1Q15361 905 aaPredicted RBP16■□□□□ 0.15
TOP3A-205ENST00000477508 CDC37L1Q7L3B6 337 aa16■□□□□ 0.15
TOP3A-205ENST00000477508 DZIP1Q86YF9 867 aaKnown RBP16■□□□□ 0.15
TOP3A-205ENST00000477508 ZDHHC15Q96MV8 337 aa16■□□□□ 0.15
TOP3A-205ENST00000477508 ECHDC1Q9NTX5 307 aa16■□□□□ 0.15
TOP3A-205ENST00000477508 LRP2BPQ9P2M1 347 aa16■□□□□ 0.15
TOP3A-205ENST00000477508 AKAP11Q9UKA4 1901 aa16■□□□□ 0.15
TOP3A-205ENST00000477508 TTC41PQ6P2S7 1318 aa15.99■□□□□ 0.15
TOP3A-205ENST00000477508 CYP2E1P05181 493 aaPredicted RBP15.99■□□□□ 0.15
TOP3A-205ENST00000477508 LDHCP07864 332 aa15.99■□□□□ 0.15
TOP3A-205ENST00000477508 ZAP70P43403 619 aa15.99■□□□□ 0.15
TOP3A-205ENST00000477508 GRIK5Q16478 980 aa15.99■□□□□ 0.15
TOP3A-205ENST00000477508 NBPF9Q3BBW0 867 aa15.99■□□□□ 0.15
TOP3A-205ENST00000477508 MAP1SQ66K74 1059 aaPredicted RBP15.99■□□□□ 0.15
TOP3A-205ENST00000477508 PI16Q6UXB8 463 aa15.99■□□□□ 0.15
TOP3A-205ENST00000477508 APOBEC3FQ8IUX4 373 aaKnown RBP15.99■□□□□ 0.15
TOP3A-205ENST00000477508 SULF1Q8IWU6 871 aa15.99■□□□□ 0.15
TOP3A-205ENST00000477508 SNRKQ9NRH2 765 aa15.99■□□□□ 0.15
TOP3A-205ENST00000477508 ERC2O15083 957 aa15.98■□□□□ 0.15
TOP3A-205ENST00000477508 NUCB1Q02818 461 aa15.98■□□□□ 0.15
TOP3A-205ENST00000477508 FAM163AQ96GL9 167 aaPredicted RBP15.98■□□□□ 0.15
TOP3A-205ENST00000477508 PRMT6Q96LA8 375 aaPredicted RBP15.98■□□□□ 0.15
TOP3A-205ENST00000477508 GGA3Q9NZ52 723 aa15.98■□□□□ 0.15
TOP3A-205ENST00000477508 RAI14Q9P0K7 980 aa15.98■□□□□ 0.15
TOP3A-205ENST00000477508 ITGBL1O95965 494 aaPredicted RBP15.97■□□□□ 0.15
TOP3A-205ENST00000477508 ANGEL2Q5VTE6 544 aaKnown RBP15.97■□□□□ 0.15
TOP3A-205ENST00000477508 ERICH6BQ5W0A0 696 aa15.97■□□□□ 0.15
TOP3A-205ENST00000477508 TBC1D9Q6ZT07 1266 aa15.97■□□□□ 0.15
TOP3A-205ENST00000477508 KRT26Q7Z3Y9 468 aa15.97■□□□□ 0.15
TOP3A-205ENST00000477508 CHD1LQ86WJ1 897 aa15.97■□□□□ 0.15
TOP3A-205ENST00000477508 HAUS7Q99871 368 aa15.97■□□□□ 0.15
TOP3A-205ENST00000477508 GLRX3O76003 335 aaKnown RBP15.96■□□□□ 0.15
TOP3A-205ENST00000477508 MECOMQ03112 1051 aa15.96■□□□□ 0.15
TOP3A-205ENST00000477508 MAP3K12Q12852 859 aa15.96■□□□□ 0.15
TOP3A-205ENST00000477508 B4GALNT3Q6L9W6 998 aa15.96■□□□□ 0.15
TOP3A-205ENST00000477508 NSUN4Q96CB9 384 aaKnown RBP15.96■□□□□ 0.15
TOP3A-205ENST00000477508 BOLA2Q9H3K6 86 aa15.96■□□□□ 0.15
TOP3A-205ENST00000477508 TMOD2Q9NZR1 351 aa15.96■□□□□ 0.15
TOP3A-205ENST00000477508 GAKO14976 1311 aa15.95■□□□□ 0.14
TOP3A-205ENST00000477508 POLR2AP24928 1970 aaKnown RBP15.95■□□□□ 0.14
TOP3A-205ENST00000477508 MAP4K4O95819 1239 aaPredicted RBP15.95■□□□□ 0.14
TOP3A-205ENST00000477508 MX1P20591 662 aa15.95■□□□□ 0.14
TOP3A-205ENST00000477508 TNFAIP1Q13829 316 aa15.95■□□□□ 0.14
TOP3A-205ENST00000477508 DIXDC1Q155Q3 683 aa15.95■□□□□ 0.14
TOP3A-205ENST00000477508 SPDYE2Q495Y8 402 aa15.95■□□□□ 0.14
TOP3A-205ENST00000477508 FKBP1CQ5VVH2 108 aa15.95■□□□□ 0.14
TOP3A-205ENST00000477508 APOBEC3HQ6NTF7 200 aaKnown RBP15.95■□□□□ 0.14
TOP3A-205ENST00000477508 DNAJC2Q99543 621 aaKnown RBP15.95■□□□□ 0.14
TOP3A-205ENST00000477508 LNPKQ9C0E8 428 aa15.95■□□□□ 0.14
TOP3A-205ENST00000477508 PAG1Q9NWQ8 432 aa15.95■□□□□ 0.14
TOP3A-205ENST00000477508 STAP2Q9UGK3 403 aa15.95■□□□□ 0.14
TOP3A-205ENST00000477508 DAGLAQ9Y4D2 1042 aa15.95■□□□□ 0.14
TOP3A-205ENST00000477508 ECM29Q5VYK3 1845 aa15.94■□□□□ 0.14
TOP3A-205ENST00000477508 GOLIM4O00461 696 aa15.94■□□□□ 0.14
TOP3A-205ENST00000477508 IDH1O75874 414 aaKnown RBP15.94■□□□□ 0.14
TOP3A-205ENST00000477508 NAA16Q6N069 864 aaPredicted RBP15.94■□□□□ 0.14
TOP3A-205ENST00000477508 USP48Q86UV5 1035 aa15.94■□□□□ 0.14
TOP3A-205ENST00000477508 CERS3Q8IU89 383 aa15.94■□□□□ 0.14
TOP3A-205ENST00000477508 NOL10Q9BSC4 688 aaKnown RBP15.94■□□□□ 0.14
TOP3A-205ENST00000477508 GLIS2Q9BZE0 524 aaPredicted RBP15.94■□□□□ 0.14
TOP3A-205ENST00000477508 PIH1D3Q9NQM4 214 aaKnown RBP15.94■□□□□ 0.14
TOP3A-205ENST00000477508 ZNF70Q9UC06 446 aaPredicted RBP15.94■□□□□ 0.14
TOP3A-205ENST00000477508 PPP2R3BQ9Y5P8 575 aa15.94■□□□□ 0.14
TOP3A-205ENST00000477508 MYH2Q9UKX2 1941 aa15.94■□□□□ 0.14
TOP3A-205ENST00000477508 MROH7-TTC4A0A0A0MT08 1334 aa15.94■□□□□ 0.14
TOP3A-205ENST00000477508 ASTN2O75129 1339 aaPredicted RBP15.94■□□□□ 0.14
TOP3A-205ENST00000477508 PASKQ96RG2 1323 aa15.94■□□□□ 0.14
TOP3A-205ENST00000477508 BAG3O95817 575 aa15.93■□□□□ 0.14
TOP3A-205ENST00000477508 TNNI2P48788 182 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms