RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 ANKRD1Q15327 319 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 NFKBIBQ15653 356 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 TSR1Q2NL82 804 aaKnown RBP7.99□□□□□ -1.13
LDB3-206ENST00000477489 LRRC24Q50LG9 513 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 METTL24Q5JXM2 366 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 TTC39AQ5SRH9 613 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 GORABQ5T7V8 394 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 VPS53Q5VIR6 699 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 CHMP4CQ96CF2 233 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 XAGE2Q96GT9 111 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 ZSCAN31Q96LW9 406 aaPredicted RBP7.99□□□□□ -1.13
LDB3-206ENST00000477489 NEUROD6Q96NK8 337 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 GBP4Q96PP9 640 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 DSCC1Q9BVC3 393 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.99□□□□□ -1.13
LDB3-206ENST00000477489 GREM2Q9H772 168 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 KIAA1468Q9P260 1216 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 AKAP11Q9UKA4 1901 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 A0A1B0GUL6 1792 aa7.99□□□□□ -1.13
LDB3-206ENST00000477489 UBR3Q6ZT12 1888 aa7.98□□□□□ -1.13
LDB3-206ENST00000477489 RNF113AO15541 343 aaKnown RBP7.98□□□□□ -1.13
LDB3-206ENST00000477489 ZPR1O75312 459 aa7.98□□□□□ -1.13
LDB3-206ENST00000477489 MAP4K4O95819 1239 aaPredicted RBP7.98□□□□□ -1.13
LDB3-206ENST00000477489 HMGB1P09429 215 aaKnown RBP7.98□□□□□ -1.13
LDB3-206ENST00000477489 SLC5A1P13866 664 aa7.98□□□□□ -1.13
LDB3-206ENST00000477489 FGFR2P21802 821 aa7.98□□□□□ -1.13
LDB3-206ENST00000477489 ARID4AP29374 1257 aaPredicted RBP7.98□□□□□ -1.13
LDB3-206ENST00000477489 RAB3GAP1Q15042 981 aa7.98□□□□□ -1.13
LDB3-206ENST00000477489 LAPTM4BQ86VI4 370 aa7.98□□□□□ -1.13
LDB3-206ENST00000477489 MPHOSPH8Q99549 860 aa7.98□□□□□ -1.13
LDB3-206ENST00000477489 SH2B1Q9NRF2 756 aaPredicted RBP7.98□□□□□ -1.13
LDB3-206ENST00000477489 SNX14Q9Y5W7 946 aa7.98□□□□□ -1.13
LDB3-206ENST00000477489 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.98□□□□□ -1.13
LDB3-206ENST00000477489 DOCK2Q92608 1830 aa7.98□□□□□ -1.13
LDB3-206ENST00000477489 CARMIL3Q8ND23 1372 aa7.97□□□□□ -1.13
LDB3-206ENST00000477489 RPAP1Q9BWH6 1393 aaPredicted RBP7.97□□□□□ -1.13
LDB3-206ENST00000477489 GRXCR2A6NFK2 248 aa7.97□□□□□ -1.13
LDB3-206ENST00000477489 TAF5LO75529 589 aa7.97□□□□□ -1.13
LDB3-206ENST00000477489 TIMM10P62072 90 aa7.97□□□□□ -1.13
LDB3-206ENST00000477489 ZMYM1Q5SVZ6 1142 aa7.97□□□□□ -1.13
LDB3-206ENST00000477489 TPTE2Q6XPS3 522 aa7.97□□□□□ -1.13
LDB3-206ENST00000477489 ANKK1Q8NFD2 765 aa7.97□□□□□ -1.13
LDB3-206ENST00000477489 ZNF594Q96JF6 807 aaPredicted RBP7.97□□□□□ -1.13
LDB3-206ENST00000477489 TTC14Q96N46 770 aa7.97□□□□□ -1.13
LDB3-206ENST00000477489 SETDB2Q96T68 719 aa7.97□□□□□ -1.13
LDB3-206ENST00000477489 DNAJC2Q99543 621 aaKnown RBP7.97□□□□□ -1.13
LDB3-206ENST00000477489 PUS3Q9BZE2 481 aaKnown RBP7.97□□□□□ -1.13
LDB3-206ENST00000477489 SLKQ9H2G2 1235 aaPredicted RBP7.97□□□□□ -1.13
LDB3-206ENST00000477489 CTNNA3Q9UI47 895 aa7.97□□□□□ -1.13
LDB3-206ENST00000477489 PALD1Q9ULE6 856 aa7.97□□□□□ -1.13
LDB3-206ENST00000477489 RBM8AQ9Y5S9 174 aaKnown RBP7.97□□□□□ -1.13
LDB3-206ENST00000477489 CYP46A1Q9Y6A2 500 aa7.97□□□□□ -1.13
LDB3-206ENST00000477489 PDS5AQ29RF7 1337 aaKnown RBP7.97□□□□□ -1.13
LDB3-206ENST00000477489 A0A0D9SFI3 127 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 SEMA3EO15041 775 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 GNPATO15228 680 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 CD2BP2O95400 341 aaKnown RBP7.96□□□□□ -1.14
LDB3-206ENST00000477489 KCNJ4P48050 445 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 UBE4AQ14139 1066 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 UBE3CQ15386 1083 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 TRAPPC3LQ5T215 181 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 CREB3L3Q68CJ9 461 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 RUFY3Q7L099 469 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 APPBP2Q92624 585 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 TMX3Q96JJ7 454 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 FAM227BQ96M60 508 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 NLRP3Q96P20 1036 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 SYT17Q9BSW7 474 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 ANKRD2Q9GZV1 360 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 IL25Q9H293 177 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 BSDC1Q9NW68 430 aaPredicted RBP7.96□□□□□ -1.14
LDB3-206ENST00000477489 LIMCH1Q9UPQ0 1083 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.96□□□□□ -1.14
LDB3-206ENST00000477489 ZMYM6O95789 1325 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 DUOX1Q9NRD9 1551 aa7.96□□□□□ -1.14
LDB3-206ENST00000477489 GOLGA6L22H0YM25 854 aa7.95□□□□□ -1.14
LDB3-206ENST00000477489 GOLIM4O00461 696 aa7.95□□□□□ -1.14
LDB3-206ENST00000477489 SLC27A2O14975 620 aa7.95□□□□□ -1.14
LDB3-206ENST00000477489 RFC4P35249 363 aa7.95□□□□□ -1.14
LDB3-206ENST00000477489 SKOR2Q2VWA4 1001 aaPredicted RBP7.95□□□□□ -1.14
LDB3-206ENST00000477489 PRPF40BQ6NWY9 871 aaKnown RBP7.95□□□□□ -1.14
LDB3-206ENST00000477489 DDX46Q7L014 1031 aaKnown RBP7.95□□□□□ -1.14
LDB3-206ENST00000477489 ANKRD18AQ8IVF6 992 aa7.95□□□□□ -1.14
LDB3-206ENST00000477489 FBXL16Q8N461 479 aa7.95□□□□□ -1.14
LDB3-206ENST00000477489 FLAD1Q8NFF5 587 aa7.95□□□□□ -1.14
LDB3-206ENST00000477489 FHDC1Q9C0D6 1143 aaPredicted RBP7.95□□□□□ -1.14
LDB3-206ENST00000477489 GNL3LQ9NVN8 582 aaKnown RBP7.95□□□□□ -1.14
LDB3-206ENST00000477489 SEPT9Q9UHD8 586 aaPredicted RBP7.95□□□□□ -1.14
LDB3-206ENST00000477489 PLSCR1O15162 318 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 ZBTB7AO95365 584 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 CYP2E1P05181 493 aaPredicted RBP7.94□□□□□ -1.14
LDB3-206ENST00000477489 HCLS1P14317 486 aaPredicted RBP7.94□□□□□ -1.14
LDB3-206ENST00000477489 OSBPP22059 807 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 GTF2E1P29083 439 aaPredicted RBP7.94□□□□□ -1.14
LDB3-206ENST00000477489 MCM4P33991 863 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 NT5C2P49902 561 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 PTH1RQ03431 593 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 CCDC102BQ68D86 513 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 BLOC1S2Q6QNY1 142 aa7.94□□□□□ -1.14
LDB3-206ENST00000477489 TMC4Q7Z404 712 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms