RNA–Protein interactions for RNA: ENST00000475464.1

PTP4A2-204, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 366 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-204ENST00000475464 GTF2A2P52657 109 aa12.89□□□□□ -0.35
PTP4A2-204ENST00000475464 TAF1CQ15572 869 aaPredicted RBP12.89□□□□□ -0.35
PTP4A2-204ENST00000475464 CCL15Q16663 113 aa12.89□□□□□ -0.35
PTP4A2-204ENST00000475464 NBPF11Q86T75 865 aa12.89□□□□□ -0.35
PTP4A2-204ENST00000475464 WDR63Q8IWG1 891 aa12.89□□□□□ -0.35
PTP4A2-204ENST00000475464 CNKSR2Q8WXI2 1034 aa12.89□□□□□ -0.35
PTP4A2-204ENST00000475464 MS4A4AQ96JQ5 239 aa12.89□□□□□ -0.35
PTP4A2-204ENST00000475464 FAM84BQ96KN1 310 aaPredicted RBP12.89□□□□□ -0.35
PTP4A2-204ENST00000475464 TMEM39BQ9GZU3 492 aa12.89□□□□□ -0.35
PTP4A2-204ENST00000475464 MYH3P11055 1940 aa12.89□□□□□ -0.35
PTP4A2-204ENST00000475464 CRKP46108 304 aa12.88□□□□□ -0.35
PTP4A2-204ENST00000475464 CHAF1AQ13111 956 aaPredicted RBP12.88□□□□□ -0.35
PTP4A2-204ENST00000475464 VGLL4Q14135 290 aa12.88□□□□□ -0.35
PTP4A2-204ENST00000475464 SLC9C1Q4G0N8 1177 aa12.88□□□□□ -0.35
PTP4A2-204ENST00000475464 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
PTP4A2-204ENST00000475464 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.88□□□□□ -0.35
PTP4A2-204ENST00000475464 CDAN1Q8IWY9 1227 aa12.88□□□□□ -0.35
PTP4A2-204ENST00000475464 BRI3BPQ8WY22 251 aa12.88□□□□□ -0.35
PTP4A2-204ENST00000475464 OTUD5Q96G74 571 aa12.88□□□□□ -0.35
PTP4A2-204ENST00000475464 PUS3Q9BZE2 481 aaKnown RBP12.88□□□□□ -0.35
PTP4A2-204ENST00000475464 ALDH1L1O75891 902 aa12.87□□□□□ -0.35
PTP4A2-204ENST00000475464 MYCP01106 439 aaPredicted RBP12.87□□□□□ -0.35
PTP4A2-204ENST00000475464 SLC4A8Q2Y0W8 1093 aa12.87□□□□□ -0.35
PTP4A2-204ENST00000475464 TEPSINQ96N21 525 aa12.87□□□□□ -0.35
PTP4A2-204ENST00000475464 SRCIN1Q9C0H9 1055 aa12.87□□□□□ -0.35
PTP4A2-204ENST00000475464 MRS2Q9HD23 443 aa12.87□□□□□ -0.35
PTP4A2-204ENST00000475464 IQSEC3Q9UPP2 1182 aaPredicted RBP12.87□□□□□ -0.35
PTP4A2-204ENST00000475464 KIAA0100Q14667 2235 aaKnown RBP12.86□□□□□ -0.35
PTP4A2-204ENST00000475464 ZNF646O15015 1829 aaPredicted RBP12.86□□□□□ -0.35
PTP4A2-204ENST00000475464 CAP1Q01518 475 aa12.86□□□□□ -0.35
PTP4A2-204ENST00000475464 CAVIN4Q5BKX8 364 aa12.86□□□□□ -0.35
PTP4A2-204ENST00000475464 ZNF333Q96JL9 665 aa12.86□□□□□ -0.35
PTP4A2-204ENST00000475464 PTCH2Q9Y6C5 1203 aa12.86□□□□□ -0.35
PTP4A2-204ENST00000475464 MROH5Q6ZUA9 1318 aa12.86□□□□□ -0.35
PTP4A2-204ENST00000475464 CETPP11597 493 aa12.85□□□□□ -0.35
PTP4A2-204ENST00000475464 CACNB3P54284 484 aa12.85□□□□□ -0.35
PTP4A2-204ENST00000475464 KIF22Q14807 665 aa12.85□□□□□ -0.35
PTP4A2-204ENST00000475464 GRIK5Q16478 980 aa12.85□□□□□ -0.35
PTP4A2-204ENST00000475464 METTL24Q5JXM2 366 aa12.85□□□□□ -0.35
PTP4A2-204ENST00000475464 FAM43AQ8N2R8 423 aa12.85□□□□□ -0.35
PTP4A2-204ENST00000475464 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.85□□□□□ -0.35
PTP4A2-204ENST00000475464 TBC1D22AQ8WUA7 517 aa12.85□□□□□ -0.35
PTP4A2-204ENST00000475464 TEKT1Q969V4 418 aa12.85□□□□□ -0.35
PTP4A2-204ENST00000475464 SUCLG2Q96I99 432 aa12.85□□□□□ -0.35
PTP4A2-204ENST00000475464 TMOD2Q9NZR1 351 aa12.85□□□□□ -0.35
PTP4A2-204ENST00000475464 RIPOR2Q9Y4F9 1068 aa12.85□□□□□ -0.35
PTP4A2-204ENST00000475464 SPDYE5A6NIY4 337 aa12.84□□□□□ -0.35
PTP4A2-204ENST00000475464 ECM2O94769 699 aaPredicted RBP12.84□□□□□ -0.35
PTP4A2-204ENST00000475464 SNAPC2Q13487 334 aa12.84□□□□□ -0.35
PTP4A2-204ENST00000475464 FBXO33Q7Z6M2 555 aa12.84□□□□□ -0.35
PTP4A2-204ENST00000475464 ERO1BQ86YB8 467 aa12.84□□□□□ -0.35
PTP4A2-204ENST00000475464 ZKSCAN4Q969J2 545 aaPredicted RBP12.84□□□□□ -0.35
PTP4A2-204ENST00000475464 HOOK2Q96ED9 719 aa12.84□□□□□ -0.35
PTP4A2-204ENST00000475464 WRNIP1Q96S55 665 aa12.84□□□□□ -0.35
PTP4A2-204ENST00000475464 TLR2O60603 784 aa12.83□□□□□ -0.36
PTP4A2-204ENST00000475464 NBPF7P0C2Y1 421 aaPredicted RBP12.83□□□□□ -0.36
PTP4A2-204ENST00000475464 HDLBPQ00341 1268 aaKnown RBP12.83□□□□□ -0.36
PTP4A2-204ENST00000475464 SH3TC2Q8TF17 1288 aa12.83□□□□□ -0.36
PTP4A2-204ENST00000475464 BICC1Q9H694 974 aaKnown RBP12.83□□□□□ -0.36
PTP4A2-204ENST00000475464 SPINK5Q9NQ38 1064 aaPredicted RBP12.83□□□□□ -0.36
PTP4A2-204ENST00000475464 BTBD19C9JJ37 291 aa12.82□□□□□ -0.36
PTP4A2-204ENST00000475464 IRF6O14896 467 aa12.82□□□□□ -0.36
PTP4A2-204ENST00000475464 BCAMP50895 628 aa12.82□□□□□ -0.36
PTP4A2-204ENST00000475464 LACTBP83111 547 aaPredicted RBP12.82□□□□□ -0.36
PTP4A2-204ENST00000475464 LRRC24Q50LG9 513 aa12.82□□□□□ -0.36
PTP4A2-204ENST00000475464 KAZALD1Q96I82 304 aa12.82□□□□□ -0.36
PTP4A2-204ENST00000475464 ZDHHC15Q96MV8 337 aa12.82□□□□□ -0.36
PTP4A2-204ENST00000475464 SNCAIPQ9Y6H5 919 aa12.82□□□□□ -0.36
PTP4A2-204ENST00000475464 PDE8BO95263 885 aa12.81□□□□□ -0.36
PTP4A2-204ENST00000475464 DCAF15Q66K64 600 aa12.81□□□□□ -0.36
PTP4A2-204ENST00000475464 MIGA2Q7L4E1 593 aa12.81□□□□□ -0.36
PTP4A2-204ENST00000475464 FAM83AQ86UY5 434 aa12.81□□□□□ -0.36
PTP4A2-204ENST00000475464 MRIQ9BWK5 157 aa12.81□□□□□ -0.36
PTP4A2-204ENST00000475464 ARHGAP39Q9C0H5 1083 aa12.81□□□□□ -0.36
PTP4A2-204ENST00000475464 ZCCHC17Q9NP64 241 aaKnown RBP12.81□□□□□ -0.36
PTP4A2-204ENST00000475464 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
PTP4A2-204ENST00000475464 ANP32CO43423 234 aa12.8□□□□□ -0.36
PTP4A2-204ENST00000475464 GNRH1P01148 92 aa12.8□□□□□ -0.36
PTP4A2-204ENST00000475464 ZEB1P37275 1124 aaPredicted RBP12.8□□□□□ -0.36
PTP4A2-204ENST00000475464 FXR1P51114 621 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTP4A2-204ENST00000475464 PPIL2Q13356 520 aa12.8□□□□□ -0.36
PTP4A2-204ENST00000475464 FKBP1CQ5VVH2 108 aa12.8□□□□□ -0.36
PTP4A2-204ENST00000475464 APOBEC3HQ6NTF7 200 aaKnown RBP12.8□□□□□ -0.36
PTP4A2-204ENST00000475464 ZNF341Q9BYN7 854 aa12.8□□□□□ -0.36
PTP4A2-204ENST00000475464 MAST3O60307 1309 aa12.8□□□□□ -0.36
PTP4A2-204ENST00000475464 H0YGN5 161 aa12.79□□□□□ -0.36
PTP4A2-204ENST00000475464 IFIT1P09914 478 aaKnown RBP12.79□□□□□ -0.36
PTP4A2-204ENST00000475464 PRMT2P55345 433 aa12.79□□□□□ -0.36
PTP4A2-204ENST00000475464 PPATQ06203 517 aa12.79□□□□□ -0.36
PTP4A2-204ENST00000475464 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.79□□□□□ -0.36
PTP4A2-204ENST00000475464 KLHDC4Q8TBB5 520 aa12.79□□□□□ -0.36
PTP4A2-204ENST00000475464 CPA4Q9UI42 421 aa12.79□□□□□ -0.36
PTP4A2-204ENST00000475464 SUGT1Q9Y2Z0 365 aa12.79□□□□□ -0.36
PTP4A2-204ENST00000475464 FMNL1O95466 1100 aaPredicted RBP12.78□□□□□ -0.36
PTP4A2-204ENST00000475464 HOXD10P28358 340 aa12.78□□□□□ -0.36
PTP4A2-204ENST00000475464 INPP5BP32019 993 aa12.78□□□□□ -0.36
PTP4A2-204ENST00000475464 PSMC4P43686 418 aa12.78□□□□□ -0.36
PTP4A2-204ENST00000475464 PUM3Q15397 648 aaKnown RBP12.78□□□□□ -0.36
PTP4A2-204ENST00000475464 RABL6Q3YEC7 729 aaPredicted RBP12.78□□□□□ -0.36
PTP4A2-204ENST00000475464 HHIPL2Q6UWX4 724 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms