RNA–Protein interactions for RNA: ENST00000473782.1

HPS4-210, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-210ENST00000473782 UNC80Q8N2C7 3258 aa20.81■□□□□ 0.92
HPS4-210ENST00000473782 ECM2O94769 699 aaPredicted RBP20.81■□□□□ 0.92
HPS4-210ENST00000473782 GJB1P08034 283 aa20.81■□□□□ 0.92
HPS4-210ENST00000473782 CCDC30Q5VVM6 783 aa20.81■□□□□ 0.92
HPS4-210ENST00000473782 G2E3Q7L622 706 aa20.81■□□□□ 0.92
HPS4-210ENST00000473782 TRIM47Q96LD4 638 aa20.81■□□□□ 0.92
HPS4-210ENST00000473782 ZCCHC17Q9NP64 241 aaKnown RBP20.81■□□□□ 0.92
HPS4-210ENST00000473782 SRRDQ9UH36 339 aa20.81■□□□□ 0.92
HPS4-210ENST00000473782 FAM205AQ6ZU69 1335 aa20.8■□□□□ 0.92
HPS4-210ENST00000473782 IRF6O14896 467 aa20.8■□□□□ 0.92
HPS4-210ENST00000473782 TNFAIP1Q13829 316 aa20.8■□□□□ 0.92
HPS4-210ENST00000473782 GCKRQ14397 625 aa20.8■□□□□ 0.92
HPS4-210ENST00000473782 KIF22Q14807 665 aa20.8■□□□□ 0.92
HPS4-210ENST00000473782 RALBP1Q15311 655 aa20.8■□□□□ 0.92
HPS4-210ENST00000473782 SERPINA10Q9UK55 444 aa20.8■□□□□ 0.92
HPS4-210ENST00000473782 ADGRA2Q96PE1 1338 aa20.79■□□□□ 0.92
HPS4-210ENST00000473782 TCP10L2B9ZVM9 353 aa20.79■□□□□ 0.92
HPS4-210ENST00000473782 CETPP11597 493 aa20.79■□□□□ 0.92
HPS4-210ENST00000473782 CCL5P13501 91 aa20.79■□□□□ 0.92
HPS4-210ENST00000473782 OSBPP22059 807 aa20.79■□□□□ 0.92
HPS4-210ENST00000473782 ZNF804AQ7Z570 1209 aa20.79■□□□□ 0.92
HPS4-210ENST00000473782 DZIP1LQ8IYY4 767 aaKnown RBP20.79■□□□□ 0.92
HPS4-210ENST00000473782 NKX2-3Q8TAU0 364 aa20.79■□□□□ 0.92
HPS4-210ENST00000473782 A0A1B0GUL6 1792 aa20.79■□□□□ 0.92
HPS4-210ENST00000473782 A0A1W2PPC1 479 aa20.78■□□□□ 0.92
HPS4-210ENST00000473782 GRK4P32298 578 aa20.78■□□□□ 0.92
HPS4-210ENST00000473782 PSMC4P43686 418 aa20.78■□□□□ 0.92
HPS4-210ENST00000473782 MNX1P50219 401 aaPredicted RBP20.78■□□□□ 0.92
HPS4-210ENST00000473782 GNAI1P63096 354 aa20.78■□□□□ 0.92
HPS4-210ENST00000473782 NEXNQ0ZGT2 675 aa20.78■□□□□ 0.92
HPS4-210ENST00000473782 GRIK5Q16478 980 aa20.78■□□□□ 0.92
HPS4-210ENST00000473782 HTATIP2Q9BUP3 242 aa20.78■□□□□ 0.92
HPS4-210ENST00000473782 CPA4Q9UI42 421 aa20.78■□□□□ 0.92
HPS4-210ENST00000473782 RIPOR2Q9Y4F9 1068 aa20.78■□□□□ 0.92
HPS4-210ENST00000473782 ERO1BQ86YB8 467 aa20.77■□□□□ 0.92
HPS4-210ENST00000473782 TDRD7Q8NHU6 1098 aaKnown RBP20.77■□□□□ 0.92
HPS4-210ENST00000473782 ZKSCAN4Q969J2 545 aaPredicted RBP20.77■□□□□ 0.92
HPS4-210ENST00000473782 TTF2Q9UNY4 1162 aaKnown RBP20.77■□□□□ 0.92
HPS4-210ENST00000473782 CSADQ9Y600 493 aa20.77■□□□□ 0.92
HPS4-210ENST00000473782 ARAP2Q8WZ64 1704 aa20.77■□□□□ 0.92
HPS4-210ENST00000473782 FOXO4P98177 505 aa20.76■□□□□ 0.91
HPS4-210ENST00000473782 MFSD14BQ5SR56 506 aa20.76■□□□□ 0.91
HPS4-210ENST00000473782 NR2E3Q9Y5X4 410 aa20.76■□□□□ 0.91
HPS4-210ENST00000473782 ANKRD18BA2A2Z9 1011 aa20.75■□□□□ 0.91
HPS4-210ENST00000473782 SNAPC2Q13487 334 aa20.75■□□□□ 0.91
HPS4-210ENST00000473782 U2AF1L4Q8WU68 220 aaKnown RBP20.75■□□□□ 0.91
HPS4-210ENST00000473782 RNF208Q9H0X6 261 aa20.75■□□□□ 0.91
HPS4-210ENST00000473782 STAP2Q9UGK3 403 aa20.75■□□□□ 0.91
HPS4-210ENST00000473782 CRKP46108 304 aa20.74■□□□□ 0.91
HPS4-210ENST00000473782 PPIL2Q13356 520 aa20.74■□□□□ 0.91
HPS4-210ENST00000473782 MOGSQ13724 837 aa20.74■□□□□ 0.91
HPS4-210ENST00000473782 FARP2O94887 1054 aaPredicted RBP20.73■□□□□ 0.91
HPS4-210ENST00000473782 CACNB3P54284 484 aa20.73■□□□□ 0.91
HPS4-210ENST00000473782 RAET1EQ8TD07 263 aa20.73■□□□□ 0.91
HPS4-210ENST00000473782 UNC93B1Q9H1C4 597 aa20.73■□□□□ 0.91
HPS4-210ENST00000473782 MYPNQ86TC9 1320 aa20.73■□□□□ 0.91
HPS4-210ENST00000473782 APAF1O14727 1248 aa20.72■□□□□ 0.91
HPS4-210ENST00000473782 PRKCZQ05513 592 aa20.72■□□□□ 0.91
HPS4-210ENST00000473782 WRNIP1Q96S55 665 aa20.72■□□□□ 0.91
HPS4-210ENST00000473782 MYBBP1AQ9BQG0 1328 aaKnown RBP20.72■□□□□ 0.91
HPS4-210ENST00000473782 VCANP13611 3396 aa20.72■□□□□ 0.91
HPS4-210ENST00000473782 WDHD1O75717 1129 aaPredicted RBP20.71■□□□□ 0.91
HPS4-210ENST00000473782 SGPL1O95470 568 aa20.71■□□□□ 0.91
HPS4-210ENST00000473782 WDR43Q15061 677 aaKnown RBP eCLIP20.71■□□□□ 0.91
HPS4-210ENST00000473782 ANKRD23Q86SG2 305 aa20.71■□□□□ 0.91
HPS4-210ENST00000473782 ZNF594Q96JF6 807 aaPredicted RBP20.71■□□□□ 0.91
HPS4-210ENST00000473782 FAM84BQ96KN1 310 aaPredicted RBP20.71■□□□□ 0.91
HPS4-210ENST00000473782 GABRQQ9UN88 632 aa20.71■□□□□ 0.91
HPS4-210ENST00000473782 PDHXO00330 501 aa20.7■□□□□ 0.9
HPS4-210ENST00000473782 FMNL1O95466 1100 aaPredicted RBP20.7■□□□□ 0.9
HPS4-210ENST00000473782 HOXD10P28358 340 aa20.7■□□□□ 0.9
HPS4-210ENST00000473782 GYG1P46976 350 aa20.7■□□□□ 0.9
HPS4-210ENST00000473782 TNNI2P48788 182 aa20.7■□□□□ 0.9
HPS4-210ENST00000473782 IFIT5Q13325 482 aaKnown RBP20.7■□□□□ 0.9
HPS4-210ENST00000473782 EPHA10Q5JZY3 1008 aa20.7■□□□□ 0.9
HPS4-210ENST00000473782 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.7■□□□□ 0.9
HPS4-210ENST00000473782 PLIN1O60240 522 aa20.69■□□□□ 0.9
HPS4-210ENST00000473782 BCRP11274 1271 aa20.69■□□□□ 0.9
HPS4-210ENST00000473782 PPATQ06203 517 aa20.69■□□□□ 0.9
HPS4-210ENST00000473782 GDF15Q99988 308 aa20.69■□□□□ 0.9
HPS4-210ENST00000473782 KCNH4Q9UQ05 1017 aa20.69■□□□□ 0.9
HPS4-210ENST00000473782 EVI5O60447 810 aa20.68■□□□□ 0.9
HPS4-210ENST00000473782 SLC4A2P04920 1241 aa20.68■□□□□ 0.9
HPS4-210ENST00000473782 INPP5BP32019 993 aa20.68■□□□□ 0.9
HPS4-210ENST00000473782 GPR153Q6NV75 609 aa20.68■□□□□ 0.9
HPS4-210ENST00000473782 Q7L0L9 218 aa20.68■□□□□ 0.9
HPS4-210ENST00000473782 LINS1Q8NG48 757 aa20.68■□□□□ 0.9
HPS4-210ENST00000473782 CHMP4AQ9BY43 222 aa20.68■□□□□ 0.9
HPS4-210ENST00000473782 UBXN2AP68543 259 aa20.67■□□□□ 0.9
HPS4-210ENST00000473782 CALD1Q05682 793 aaKnown RBP20.67■□□□□ 0.9
HPS4-210ENST00000473782 GPAT2Q6NUI2 795 aa20.67■□□□□ 0.9
HPS4-210ENST00000473782 TSR2Q969E8 191 aaKnown RBP20.67■□□□□ 0.9
HPS4-210ENST00000473782 SPTBN5Q9NRC6 3674 aaKnown RBP20.66■□□□□ 0.9
HPS4-210ENST00000473782 HIBADHP31937 336 aaKnown RBP20.66■□□□□ 0.9
HPS4-210ENST00000473782 BMP8BP34820 402 aa20.66■□□□□ 0.9
HPS4-210ENST00000473782 FLIIQ13045 1269 aa20.66■□□□□ 0.9
HPS4-210ENST00000473782 APOBEC3HQ6NTF7 200 aaKnown RBP20.66■□□□□ 0.9
HPS4-210ENST00000473782 FAM83AQ86UY5 434 aa20.66■□□□□ 0.9
HPS4-210ENST00000473782 DEFB123Q8N688 67 aa20.66■□□□□ 0.9
HPS4-210ENST00000473782 SLAIN1Q8ND83 568 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms