RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 MVPQ14764 893 aaKnown RBP22.43■■□□□ 1.18
SNX4-204ENST00000473417 ARMC9Q7Z3E5 817 aa22.43■■□□□ 1.18
SNX4-204ENST00000473417 RNF186Q9NXI6 227 aa22.43■■□□□ 1.18
SNX4-204ENST00000473417 SRGAP3O43295 1099 aa22.42■■□□□ 1.18
SNX4-204ENST00000473417 RBM5P52756 815 aaKnown RBP eCLIP22.42■■□□□ 1.18
SNX4-204ENST00000473417 PRKG1Q13976 671 aa22.42■■□□□ 1.18
SNX4-204ENST00000473417 ATG9AQ7Z3C6 839 aa22.42■■□□□ 1.18
SNX4-204ENST00000473417 VEZTQ9HBM0 779 aa22.42■■□□□ 1.18
SNX4-204ENST00000473417 FBXO3Q9UK99 471 aa22.42■■□□□ 1.18
SNX4-204ENST00000473417 TRPA1O75762 1119 aa22.41■■□□□ 1.18
SNX4-204ENST00000473417 IFIT1P09914 478 aaKnown RBP22.41■■□□□ 1.18
SNX4-204ENST00000473417 BCAMP50895 628 aa22.41■■□□□ 1.18
SNX4-204ENST00000473417 PDE3AQ14432 1141 aa22.41■■□□□ 1.18
SNX4-204ENST00000473417 GRIK5Q16478 980 aa22.41■■□□□ 1.18
SNX4-204ENST00000473417 SPDYE2Q495Y8 402 aa22.41■■□□□ 1.18
SNX4-204ENST00000473417 LDLRAD1Q5T700 205 aa22.41■■□□□ 1.18
SNX4-204ENST00000473417 TBC1D22AQ8WUA7 517 aa22.41■■□□□ 1.18
SNX4-204ENST00000473417 SIL1Q9H173 461 aa22.41■■□□□ 1.18
SNX4-204ENST00000473417 ANGEL1Q9UNK9 670 aaKnown RBP22.41■■□□□ 1.18
SNX4-204ENST00000473417 PA2G4Q9UQ80 394 aaKnown RBP22.41■■□□□ 1.18
SNX4-204ENST00000473417 FRAT2O75474 233 aaPredicted RBP22.4■■□□□ 1.18
SNX4-204ENST00000473417 CIAO1O76071 339 aa22.4■■□□□ 1.18
SNX4-204ENST00000473417 CRKP46108 304 aa22.4■■□□□ 1.18
SNX4-204ENST00000473417 CHAF1AQ13111 956 aaPredicted RBP22.4■■□□□ 1.18
SNX4-204ENST00000473417 MTX1Q13505 466 aa22.4■■□□□ 1.18
SNX4-204ENST00000473417 MAP3K11Q16584 847 aa22.4■■□□□ 1.18
SNX4-204ENST00000473417 FZD1Q9UP38 647 aa22.4■■□□□ 1.18
SNX4-204ENST00000473417 LPIN2Q92539 896 aa22.39■■□□□ 1.17
SNX4-204ENST00000473417 MCOLN1Q9GZU1 580 aa22.39■■□□□ 1.17
SNX4-204ENST00000473417 ZNF70Q9UC06 446 aaPredicted RBP22.39■■□□□ 1.17
SNX4-204ENST00000473417 DDX19BQ9UMR2 479 aa22.39■■□□□ 1.17
SNX4-204ENST00000473417 PNMA6EA0A0J9YXQ4 647 aa22.38■■□□□ 1.17
SNX4-204ENST00000473417 SLC5A1P13866 664 aa22.38■■□□□ 1.17
SNX4-204ENST00000473417 HDLBPQ00341 1268 aaKnown RBP22.38■■□□□ 1.17
SNX4-204ENST00000473417 TNFAIP1Q13829 316 aa22.38■■□□□ 1.17
SNX4-204ENST00000473417 RASA3Q14644 834 aa22.38■■□□□ 1.17
SNX4-204ENST00000473417 TDRD3Q9H7E2 651 aaKnown RBP22.38■■□□□ 1.17
SNX4-204ENST00000473417 CCDC85CA6NKD9 419 aa22.37■■□□□ 1.17
SNX4-204ENST00000473417 PPP1R12BO60237 982 aaPredicted RBP22.37■■□□□ 1.17
SNX4-204ENST00000473417 RRP1P56182 461 aaKnown RBP22.37■■□□□ 1.17
SNX4-204ENST00000473417 SUPT20HL1Q3ZLR7 823 aa22.37■■□□□ 1.17
SNX4-204ENST00000473417 NBPF12Q5TAG4 269 aaPredicted RBP22.37■■□□□ 1.17
SNX4-204ENST00000473417 COPRSQ9NQ92 184 aa22.37■■□□□ 1.17
SNX4-204ENST00000473417 TM4SF4P48230 202 aa22.36■■□□□ 1.17
SNX4-204ENST00000473417 ATP8B2P98198 1209 aa22.36■■□□□ 1.17
SNX4-204ENST00000473417 DGKZQ13574 1117 aa22.36■■□□□ 1.17
SNX4-204ENST00000473417 MYH2Q9UKX2 1941 aa22.35■■□□□ 1.17
SNX4-204ENST00000473417 UNCXA6NJT0 531 aa22.35■■□□□ 1.17
SNX4-204ENST00000473417 MKRN3Q13064 507 aaKnown RBP22.35■■□□□ 1.17
SNX4-204ENST00000473417 ATP2B3Q16720 1220 aa22.35■■□□□ 1.17
SNX4-204ENST00000473417 SPRYD7Q5W111 196 aa22.35■■□□□ 1.17
SNX4-204ENST00000473417 TEKT1Q969V4 418 aa22.35■■□□□ 1.17
SNX4-204ENST00000473417 SUGT1Q9Y2Z0 365 aa22.35■■□□□ 1.17
SNX4-204ENST00000473417 MAST3O60307 1309 aa22.34■■□□□ 1.17
SNX4-204ENST00000473417 IL15P40933 162 aaPredicted RBP22.34■■□□□ 1.17
SNX4-204ENST00000473417 SREBF2Q12772 1141 aa22.34■■□□□ 1.17
SNX4-204ENST00000473417 TEPSINQ96N21 525 aa22.34■■□□□ 1.17
SNX4-204ENST00000473417 CEP126Q9P2H0 1117 aa22.34■■□□□ 1.17
SNX4-204ENST00000473417 CLMNQ96JQ2 1002 aa22.33■■□□□ 1.17
SNX4-204ENST00000473417 ZDHHC15Q96MV8 337 aa22.33■■□□□ 1.17
SNX4-204ENST00000473417 MRIQ9BWK5 157 aa22.33■■□□□ 1.17
SNX4-204ENST00000473417 CHMP4BQ9H444 224 aaKnown RBP22.33■■□□□ 1.17
SNX4-204ENST00000473417 ZBTB40Q9NUA8 1239 aa22.33■■□□□ 1.17
SNX4-204ENST00000473417 USP2O75604 605 aaPredicted RBP22.32■■□□□ 1.16
SNX4-204ENST00000473417 ZBTB48P10074 688 aaPredicted RBP22.32■■□□□ 1.16
SNX4-204ENST00000473417 POLA2Q14181 598 aa22.32■■□□□ 1.16
SNX4-204ENST00000473417 CEP85Q6P2H3 762 aa22.32■■□□□ 1.16
SNX4-204ENST00000473417 CDAN1Q8IWY9 1227 aa22.32■■□□□ 1.16
SNX4-204ENST00000473417 WDR66Q8TBY9 1149 aa22.32■■□□□ 1.16
SNX4-204ENST00000473417 AK9Q5TCS8 1911 aa22.31■■□□□ 1.16
SNX4-204ENST00000473417 TCP10L2B9ZVM9 353 aa22.31■■□□□ 1.16
SNX4-204ENST00000473417 IREB2P48200 963 aaKnown RBP22.31■■□□□ 1.16
SNX4-204ENST00000473417 TNNI2P48788 182 aa22.31■■□□□ 1.16
SNX4-204ENST00000473417 SSH3Q8TE77 659 aa22.31■■□□□ 1.16
SNX4-204ENST00000473417 SLC10A4Q96EP9 437 aa22.31■■□□□ 1.16
SNX4-204ENST00000473417 WNK4Q96J92 1243 aa22.31■■□□□ 1.16
SNX4-204ENST00000473417 DOCK2Q92608 1830 aa22.3■■□□□ 1.16
SNX4-204ENST00000473417 RGS19P49795 217 aa22.3■■□□□ 1.16
SNX4-204ENST00000473417 HHIPL2Q6UWX4 724 aa22.3■■□□□ 1.16
SNX4-204ENST00000473417 ANKRD13AQ8IZ07 590 aa22.3■■□□□ 1.16
SNX4-204ENST00000473417 CFHR5Q9BXR6 569 aa22.3■■□□□ 1.16
SNX4-204ENST00000473417 TMEM39BQ9GZU3 492 aa22.3■■□□□ 1.16
SNX4-204ENST00000473417 MANSC4A6NHS7 340 aaPredicted RBP22.29■■□□□ 1.16
SNX4-204ENST00000473417 ZBTB22O15209 634 aa22.29■■□□□ 1.16
SNX4-204ENST00000473417 TBC1D8O95759 1140 aa22.29■■□□□ 1.16
SNX4-204ENST00000473417 G3BP1Q13283 466 aaKnown RBP eCLIP22.29■■□□□ 1.16
SNX4-204ENST00000473417 NOM1Q5C9Z4 860 aaKnown RBP22.29■■□□□ 1.16
SNX4-204ENST00000473417 APOBEC3HQ6NTF7 200 aaKnown RBP22.29■■□□□ 1.16
SNX4-204ENST00000473417 RPAP1Q9BWH6 1393 aaPredicted RBP22.28■■□□□ 1.16
SNX4-204ENST00000473417 SEMA3EO15041 775 aa22.28■■□□□ 1.16
SNX4-204ENST00000473417 SURF6O75683 361 aaKnown RBP22.28■■□□□ 1.16
SNX4-204ENST00000473417 PHKA1P46020 1223 aa22.28■■□□□ 1.16
SNX4-204ENST00000473417 CACNB3P54284 484 aa22.28■■□□□ 1.16
SNX4-204ENST00000473417 FKBP1CQ5VVH2 108 aa22.28■■□□□ 1.16
SNX4-204ENST00000473417 GNL3LQ9NVN8 582 aaKnown RBP22.28■■□□□ 1.16
SNX4-204ENST00000473417 SALL1Q9NSC2 1324 aa22.28■■□□□ 1.16
SNX4-204ENST00000473417 INHBEP58166 350 aa22.27■■□□□ 1.16
SNX4-204ENST00000473417 TFCP2Q12800 502 aa22.27■■□□□ 1.16
SNX4-204ENST00000473417 FAM83AQ86UY5 434 aa22.27■■□□□ 1.16
SNX4-204ENST00000473417 TMOD2Q9NZR1 351 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms