RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 FBXO3Q9UK99 471 aa19.13■□□□□ 0.65
VTI1A-203ENST00000472892 FZD1Q9UP38 647 aa19.13■□□□□ 0.65
VTI1A-203ENST00000472892 AKAP11Q9UKA4 1901 aa19.12■□□□□ 0.65
VTI1A-203ENST00000472892 FRAT2O75474 233 aaPredicted RBP19.12■□□□□ 0.65
VTI1A-203ENST00000472892 CRKP46108 304 aa19.12■□□□□ 0.65
VTI1A-203ENST00000472892 SPRYD7Q5W111 196 aa19.12■□□□□ 0.65
VTI1A-203ENST00000472892 MRIQ9BWK5 157 aa19.12■□□□□ 0.65
VTI1A-203ENST00000472892 TDRD3Q9H7E2 651 aaKnown RBP19.12■□□□□ 0.65
VTI1A-203ENST00000472892 HDAC5Q9UQL6 1122 aa19.12■□□□□ 0.65
VTI1A-203ENST00000472892 SSC5DA1L4H1 1573 aa19.11■□□□□ 0.65
VTI1A-203ENST00000472892 CCDC85CA6NKD9 419 aa19.11■□□□□ 0.65
VTI1A-203ENST00000472892 MKRN3Q13064 507 aaKnown RBP19.11■□□□□ 0.65
VTI1A-203ENST00000472892 CHAF1AQ13111 956 aaPredicted RBP19.11■□□□□ 0.65
VTI1A-203ENST00000472892 LPIN2Q92539 896 aa19.11■□□□□ 0.65
VTI1A-203ENST00000472892 SLC10A4Q96EP9 437 aa19.11■□□□□ 0.65
VTI1A-203ENST00000472892 ECM29Q5VYK3 1845 aa19.11■□□□□ 0.65
VTI1A-203ENST00000472892 USP2O75604 605 aaPredicted RBP19.1■□□□□ 0.65
VTI1A-203ENST00000472892 CIAO1O76071 339 aa19.1■□□□□ 0.65
VTI1A-203ENST00000472892 SREBF2Q12772 1141 aa19.1■□□□□ 0.65
VTI1A-203ENST00000472892 TNFAIP1Q13829 316 aa19.1■□□□□ 0.65
VTI1A-203ENST00000472892 INTS3Q68E01 1043 aaKnown RBP19.1■□□□□ 0.65
VTI1A-203ENST00000472892 SUGT1Q9Y2Z0 365 aa19.1■□□□□ 0.65
VTI1A-203ENST00000472892 SLC5A1P13866 664 aa19.09■□□□□ 0.65
VTI1A-203ENST00000472892 FOXD4L1Q9NU39 408 aa19.09■□□□□ 0.65
VTI1A-203ENST00000472892 LRRFIP2Q9Y608 721 aaKnown RBP19.09■□□□□ 0.65
VTI1A-203ENST00000472892 TBC1D8O95759 1140 aa19.08■□□□□ 0.64
VTI1A-203ENST00000472892 IREB2P48200 963 aaKnown RBP19.08■□□□□ 0.64
VTI1A-203ENST00000472892 INHBEP58166 350 aa19.08■□□□□ 0.64
VTI1A-203ENST00000472892 TEKT1Q969V4 418 aa19.08■□□□□ 0.64
VTI1A-203ENST00000472892 CLMNQ96JQ2 1002 aa19.08■□□□□ 0.64
VTI1A-203ENST00000472892 TEPSINQ96N21 525 aa19.08■□□□□ 0.64
VTI1A-203ENST00000472892 CFHR5Q9BXR6 569 aa19.08■□□□□ 0.64
VTI1A-203ENST00000472892 ZBTB48P10074 688 aaPredicted RBP19.07■□□□□ 0.64
VTI1A-203ENST00000472892 RGS19P49795 217 aa19.07■□□□□ 0.64
VTI1A-203ENST00000472892 NOM1Q5C9Z4 860 aaKnown RBP19.07■□□□□ 0.64
VTI1A-203ENST00000472892 WNK4Q96J92 1243 aa19.07■□□□□ 0.64
VTI1A-203ENST00000472892 ZDHHC15Q96MV8 337 aa19.07■□□□□ 0.64
VTI1A-203ENST00000472892 MEIS3Q99687 375 aa19.07■□□□□ 0.64
VTI1A-203ENST00000472892 SIL1Q9H173 461 aa19.07■□□□□ 0.64
VTI1A-203ENST00000472892 COPRSQ9NQ92 184 aa19.07■□□□□ 0.64
VTI1A-203ENST00000472892 CEP126Q9P2H0 1117 aa19.07■□□□□ 0.64
VTI1A-203ENST00000472892 ARAP2Q8WZ64 1704 aa19.06■□□□□ 0.64
VTI1A-203ENST00000472892 MANSC4A6NHS7 340 aaPredicted RBP19.06■□□□□ 0.64
VTI1A-203ENST00000472892 TCP10L2B9ZVM9 353 aa19.06■□□□□ 0.64
VTI1A-203ENST00000472892 IL15P40933 162 aaPredicted RBP19.06■□□□□ 0.64
VTI1A-203ENST00000472892 TNNI2P48788 182 aa19.06■□□□□ 0.64
VTI1A-203ENST00000472892 HHIPL2Q6UWX4 724 aa19.06■□□□□ 0.64
VTI1A-203ENST00000472892 CTU1Q7Z7A3 348 aaKnown RBP19.06■□□□□ 0.64
VTI1A-203ENST00000472892 ANKRD13AQ8IZ07 590 aa19.06■□□□□ 0.64
VTI1A-203ENST00000472892 WDR66Q8TBY9 1149 aa19.06■□□□□ 0.64
VTI1A-203ENST00000472892 IPO8O15397 1037 aaKnown RBP19.05■□□□□ 0.64
VTI1A-203ENST00000472892 APOBEC3HQ6NTF7 200 aaKnown RBP19.05■□□□□ 0.64
VTI1A-203ENST00000472892 ZNF296Q8WUU4 475 aaPredicted RBP19.05■□□□□ 0.64
VTI1A-203ENST00000472892 TMEM39BQ9GZU3 492 aa19.05■□□□□ 0.64
VTI1A-203ENST00000472892 MAST3O60307 1309 aa19.04■□□□□ 0.64
VTI1A-203ENST00000472892 GPR25O00155 361 aa19.04■□□□□ 0.64
VTI1A-203ENST00000472892 ALDH1A1P00352 501 aa19.04■□□□□ 0.64
VTI1A-203ENST00000472892 GNAI3P08754 354 aa19.04■□□□□ 0.64
VTI1A-203ENST00000472892 ATP2B3Q16720 1220 aa19.04■□□□□ 0.64
VTI1A-203ENST00000472892 CDAN1Q8IWY9 1227 aa19.04■□□□□ 0.64
VTI1A-203ENST00000472892 PA2G4Q9UQ80 394 aaKnown RBP19.04■□□□□ 0.64
VTI1A-203ENST00000472892 ZBTB22O15209 634 aa19.03■□□□□ 0.64
VTI1A-203ENST00000472892 FKBP1CQ5VVH2 108 aa19.03■□□□□ 0.64
VTI1A-203ENST00000472892 IFNL1Q8IU54 200 aa19.03■□□□□ 0.64
VTI1A-203ENST00000472892 R3HDMLQ9H3Y0 253 aa19.03■□□□□ 0.64
VTI1A-203ENST00000472892 GNL3LQ9NVN8 582 aaKnown RBP19.03■□□□□ 0.64
VTI1A-203ENST00000472892 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.03■□□□□ 0.64
VTI1A-203ENST00000472892 BCAR3O75815 825 aa19.02■□□□□ 0.64
VTI1A-203ENST00000472892 TRIM27P14373 513 aa19.02■□□□□ 0.64
VTI1A-203ENST00000472892 GJA5P36382 358 aa19.02■□□□□ 0.64
VTI1A-203ENST00000472892 MTX1Q13505 466 aa19.02■□□□□ 0.64
VTI1A-203ENST00000472892 ATF7IPQ6VMQ6 1270 aa19.02■□□□□ 0.64
VTI1A-203ENST00000472892 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.02■□□□□ 0.64
VTI1A-203ENST00000472892 FAM83AQ86UY5 434 aa19.02■□□□□ 0.64
VTI1A-203ENST00000472892 TESPA1A2RU30 521 aaPredicted RBP19.01■□□□□ 0.63
VTI1A-203ENST00000472892 CACNB3P54284 484 aa19.01■□□□□ 0.63
VTI1A-203ENST00000472892 MAP3K9P80192 1104 aa19.01■□□□□ 0.63
VTI1A-203ENST00000472892 PKN2Q16513 984 aaKnown RBP19.01■□□□□ 0.63
VTI1A-203ENST00000472892 MIER1Q8N108 512 aa19.01■□□□□ 0.63
VTI1A-203ENST00000472892 TMOD2Q9NZR1 351 aa19.01■□□□□ 0.63
VTI1A-203ENST00000472892 IGF2BP3O00425 579 aaKnown RBP eCLIP19■□□□□ 0.63
VTI1A-203ENST00000472892 SEMA3EO15041 775 aa19■□□□□ 0.63
VTI1A-203ENST00000472892 SRGAP3O43295 1099 aa19■□□□□ 0.63
VTI1A-203ENST00000472892 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19■□□□□ 0.63
VTI1A-203ENST00000472892 ELP3Q9H9T3 547 aa19■□□□□ 0.63
VTI1A-203ENST00000472892 DENND2AQ9ULE3 1009 aa19■□□□□ 0.63
VTI1A-203ENST00000472892 SALL1Q9NSC2 1324 aa19■□□□□ 0.63
VTI1A-203ENST00000472892 FKTNO75072 461 aa18.99■□□□□ 0.63
VTI1A-203ENST00000472892 PHKA1P46020 1223 aa18.99■□□□□ 0.63
VTI1A-203ENST00000472892 FRAT1Q92837 279 aaPredicted RBP18.99■□□□□ 0.63
VTI1A-203ENST00000472892 OPTNQ96CV9 577 aa18.99■□□□□ 0.63
VTI1A-203ENST00000472892 TNNQ9UQP3 1299 aa18.99■□□□□ 0.63
VTI1A-203ENST00000472892 PRDX5P30044 214 aa18.98■□□□□ 0.63
VTI1A-203ENST00000472892 ADORA1P30542 326 aa18.98■□□□□ 0.63
VTI1A-203ENST00000472892 TIMM10P62072 90 aa18.98■□□□□ 0.63
VTI1A-203ENST00000472892 MLLT1Q03111 559 aaPredicted RBP18.98■□□□□ 0.63
VTI1A-203ENST00000472892 VGLL4Q14135 290 aa18.98■□□□□ 0.63
VTI1A-203ENST00000472892 CCDC102BQ68D86 513 aa18.98■□□□□ 0.63
VTI1A-203ENST00000472892 MS4A4AQ96JQ5 239 aa18.98■□□□□ 0.63
VTI1A-203ENST00000472892 PTPN18Q99952 460 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms