RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 CCDC136Q96JN2 1154 aa24.34■■□□□ 1.49
SF1-213ENST00000472725 HAUS7Q99871 368 aa24.34■■□□□ 1.49
SF1-213ENST00000472725 LNPKQ9C0E8 428 aa24.34■■□□□ 1.49
SF1-213ENST00000472725 STAP2Q9UGK3 403 aa24.34■■□□□ 1.49
SF1-213ENST00000472725 SHTN1A0MZ66 631 aa24.33■■□□□ 1.49
SF1-213ENST00000472725 F8W031 263 aaPredicted RBP24.33■■□□□ 1.49
SF1-213ENST00000472725 GLRX3O76003 335 aaKnown RBP24.33■■□□□ 1.49
SF1-213ENST00000472725 PRDX5P30044 214 aa24.33■■□□□ 1.49
SF1-213ENST00000472725 SAMD7Q7Z3H4 446 aa24.33■■□□□ 1.49
SF1-213ENST00000472725 RBM46Q8TBY0 533 aaKnown RBP24.33■■□□□ 1.49
SF1-213ENST00000472725 TEKT1Q969V4 418 aa24.33■■□□□ 1.49
SF1-213ENST00000472725 SNRKQ9NRH2 765 aa24.33■■□□□ 1.49
SF1-213ENST00000472725 PGAP2Q9UHJ9 254 aa24.33■■□□□ 1.49
SF1-213ENST00000472725 AOX1Q06278 1338 aa24.33■■□□□ 1.48
SF1-213ENST00000472725 DLGAP5Q15398 846 aa24.32■■□□□ 1.48
SF1-213ENST00000472725 TBC1D10BQ4KMP7 808 aaPredicted RBP24.32■■□□□ 1.48
SF1-213ENST00000472725 EAPPQ56P03 285 aaPredicted RBP24.32■■□□□ 1.48
SF1-213ENST00000472725 TRPM4Q8TD43 1214 aa24.32■■□□□ 1.48
SF1-213ENST00000472725 ZBED3Q96IU2 234 aaPredicted RBP24.32■■□□□ 1.48
SF1-213ENST00000472725 PPP4R2Q9NY27 417 aa24.32■■□□□ 1.48
SF1-213ENST00000472725 LRP2BPQ9P2M1 347 aa24.32■■□□□ 1.48
SF1-213ENST00000472725 CRKP46108 304 aa24.31■■□□□ 1.48
SF1-213ENST00000472725 GSTO1P78417 241 aa24.31■■□□□ 1.48
SF1-213ENST00000472725 GRIK5Q16478 980 aa24.31■■□□□ 1.48
SF1-213ENST00000472725 DZIP1Q86YF9 867 aaKnown RBP24.31■■□□□ 1.48
SF1-213ENST00000472725 FAM163AQ96GL9 167 aaPredicted RBP24.31■■□□□ 1.48
SF1-213ENST00000472725 BOLA2Q9H3K6 86 aa24.31■■□□□ 1.48
SF1-213ENST00000472725 ECM29Q5VYK3 1845 aa24.31■■□□□ 1.48
SF1-213ENST00000472725 DOCK2Q92608 1830 aa24.31■■□□□ 1.48
SF1-213ENST00000472725 MAST2Q6P0Q8 1798 aa24.3■■□□□ 1.48
SF1-213ENST00000472725 LDHCP07864 332 aa24.3■■□□□ 1.48
SF1-213ENST00000472725 HIRAP54198 1017 aaPredicted RBP24.3■■□□□ 1.48
SF1-213ENST00000472725 PDE1AP54750 535 aa24.3■■□□□ 1.48
SF1-213ENST00000472725 CFAP100Q494V2 611 aa24.3■■□□□ 1.48
SF1-213ENST00000472725 ZDHHC15Q96MV8 337 aa24.3■■□□□ 1.48
SF1-213ENST00000472725 OSBPL3Q9H4L5 887 aa24.3■■□□□ 1.48
SF1-213ENST00000472725 PITPNM2Q9BZ72 1349 aa24.3■■□□□ 1.48
SF1-213ENST00000472725 SPDYE2BA6NHP3 402 aa24.29■■□□□ 1.48
SF1-213ENST00000472725 WNT10BO00744 389 aa24.29■■□□□ 1.48
SF1-213ENST00000472725 MYO1BO43795 1136 aa24.29■■□□□ 1.48
SF1-213ENST00000472725 SPDYE6P0CI01 402 aa24.29■■□□□ 1.48
SF1-213ENST00000472725 RBM26Q5T8P6 1007 aaKnown RBP24.29■■□□□ 1.48
SF1-213ENST00000472725 TBC1D9Q6ZT07 1266 aa24.29■■□□□ 1.48
SF1-213ENST00000472725 SMC1BQ8NDV3 1235 aa24.29■■□□□ 1.48
SF1-213ENST00000472725 PI4K2BQ8TCG2 481 aa24.29■■□□□ 1.48
SF1-213ENST00000472725 PAG1Q9NWQ8 432 aa24.29■■□□□ 1.48
SF1-213ENST00000472725 MYH2Q9UKX2 1941 aa24.29■■□□□ 1.48
SF1-213ENST00000472725 EGFRP00533 1210 aa24.28■■□□□ 1.48
SF1-213ENST00000472725 RBM5P52756 815 aaKnown RBP eCLIP24.28■■□□□ 1.48
SF1-213ENST00000472725 MAP3K12Q12852 859 aa24.28■■□□□ 1.48
SF1-213ENST00000472725 CHADLQ6NUI6 762 aa24.28■■□□□ 1.48
SF1-213ENST00000472725 OTUD7AQ8TE49 926 aaPredicted RBP24.28■■□□□ 1.48
SF1-213ENST00000472725 NSUN4Q96CB9 384 aaKnown RBP24.28■■□□□ 1.48
SF1-213ENST00000472725 DNAJC2Q99543 621 aaKnown RBP24.28■■□□□ 1.48
SF1-213ENST00000472725 RAI14Q9P0K7 980 aa24.28■■□□□ 1.48
SF1-213ENST00000472725 CLEC11AQ9Y240 323 aa24.28■■□□□ 1.48
SF1-213ENST00000472725 MECOMQ03112 1051 aa24.27■■□□□ 1.48
SF1-213ENST00000472725 FSTL1Q12841 308 aa24.27■■□□□ 1.48
SF1-213ENST00000472725 PIH1D3Q9NQM4 214 aaKnown RBP24.27■■□□□ 1.48
SF1-213ENST00000472725 GAKO14976 1311 aa24.27■■□□□ 1.48
SF1-213ENST00000472725 MYO5AQ9Y4I1 1855 aaKnown RBP24.26■■□□□ 1.47
SF1-213ENST00000472725 GOLIM4O00461 696 aa24.26■■□□□ 1.47
SF1-213ENST00000472725 PLEKHM2Q8IWE5 1019 aa24.26■■□□□ 1.47
SF1-213ENST00000472725 MAP4K4O95819 1239 aaPredicted RBP24.25■■□□□ 1.47
SF1-213ENST00000472725 NBPF9Q3BBW0 867 aa24.25■■□□□ 1.47
SF1-213ENST00000472725 TICAM2Q86XR7 235 aa24.25■■□□□ 1.47
SF1-213ENST00000472725 DCPSQ96C86 337 aaKnown RBP24.25■■□□□ 1.47
SF1-213ENST00000472725 PRMT6Q96LA8 375 aaPredicted RBP24.25■■□□□ 1.47
SF1-213ENST00000472725 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.25■■□□□ 1.47
SF1-213ENST00000472725 ANTXR1Q9H6X2 564 aa24.25■■□□□ 1.47
SF1-213ENST00000472725 IDH1O75874 414 aaKnown RBP24.24■■□□□ 1.47
SF1-213ENST00000472725 POTEIP0CG38 1075 aa24.24■■□□□ 1.47
SF1-213ENST00000472725 POTEJP0CG39 1038 aa24.24■■□□□ 1.47
SF1-213ENST00000472725 NAA16Q6N069 864 aaPredicted RBP24.24■■□□□ 1.47
SF1-213ENST00000472725 CERS3Q8IU89 383 aa24.24■■□□□ 1.47
SF1-213ENST00000472725 DAGLAQ9Y4D2 1042 aa24.24■■□□□ 1.47
SF1-213ENST00000472725 NDUFB9Q9Y6M9 179 aa24.24■■□□□ 1.47
SF1-213ENST00000472725 MROH7-TTC4A0A0A0MT08 1334 aa24.24■■□□□ 1.47
SF1-213ENST00000472725 DIXDC1Q155Q3 683 aa24.23■■□□□ 1.47
SF1-213ENST00000472725 LRRFIP1Q32MZ4 808 aaKnown RBP24.23■■□□□ 1.47
SF1-213ENST00000472725 ZSCAN25Q6NSZ9 544 aa24.23■■□□□ 1.47
SF1-213ENST00000472725 APOBEC3HQ6NTF7 200 aaKnown RBP24.23■■□□□ 1.47
SF1-213ENST00000472725 CDC37L1Q7L3B6 337 aa24.23■■□□□ 1.47
SF1-213ENST00000472725 APOBEC3FQ8IUX4 373 aaKnown RBP24.23■■□□□ 1.47
SF1-213ENST00000472725 POLR2AP24928 1970 aaKnown RBP24.22■■□□□ 1.47
SF1-213ENST00000472725 MYH7P12883 1935 aa24.22■■□□□ 1.47
SF1-213ENST00000472725 GPR75-ASB3A0A0A6YYF3 556 aa24.22■■□□□ 1.47
SF1-213ENST00000472725 SPDYE2Q495Y8 402 aa24.22■■□□□ 1.47
SF1-213ENST00000472725 ANGEL2Q5VTE6 544 aaKnown RBP24.22■■□□□ 1.47
SF1-213ENST00000472725 FKBP1CQ5VVH2 108 aa24.22■■□□□ 1.47
SF1-213ENST00000472725 TSHZ3Q63HK5 1081 aa24.22■■□□□ 1.47
SF1-213ENST00000472725 KBTBD3Q8NAB2 608 aa24.22■■□□□ 1.47
SF1-213ENST00000472725 ZNF384Q8TF68 577 aa24.22■■□□□ 1.47
SF1-213ENST00000472725 GGA3Q9NZ52 723 aa24.22■■□□□ 1.47
SF1-213ENST00000472725 TNFAIP1Q13829 316 aa24.21■■□□□ 1.47
SF1-213ENST00000472725 SULF1Q8IWU6 871 aa24.21■■□□□ 1.47
SF1-213ENST00000472725 CNTROBQ8N137 903 aa24.21■■□□□ 1.47
SF1-213ENST00000472725 NOL10Q9BSC4 688 aaKnown RBP24.21■■□□□ 1.47
SF1-213ENST00000472725 TMOD2Q9NZR1 351 aa24.21■■□□□ 1.47
SF1-213ENST00000472725 BAG3O95817 575 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms