RNA–Protein interactions for RNA: ENST00000470363.5

HLA-C-206, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,279 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-206ENST00000470363 CLMNQ96JQ2 1002 aa14.44□□□□□ -0.1
HLA-C-206ENST00000470363 TEPSINQ96N21 525 aa14.44□□□□□ -0.1
HLA-C-206ENST00000470363 HTTP42858 3142 aa14.44□□□□□ -0.1
HLA-C-206ENST00000470363 AKAP11Q9UKA4 1901 aa14.44□□□□□ -0.1
HLA-C-206ENST00000470363 KIF16BQ96L93 1317 aa14.43□□□□□ -0.1
HLA-C-206ENST00000470363 TRIM27P14373 513 aa14.43□□□□□ -0.1
HLA-C-206ENST00000470363 MKRN3Q13064 507 aaKnown RBP14.43□□□□□ -0.1
HLA-C-206ENST00000470363 ATF7IPQ6VMQ6 1270 aa14.43□□□□□ -0.1
HLA-C-206ENST00000470363 DZIP1LQ8IYY4 767 aaKnown RBP14.43□□□□□ -0.1
HLA-C-206ENST00000470363 CRBNQ96SW2 442 aa14.43□□□□□ -0.1
HLA-C-206ENST00000470363 ZNF70Q9UC06 446 aaPredicted RBP14.43□□□□□ -0.1
HLA-C-206ENST00000470363 TTF2Q9UNY4 1162 aaKnown RBP14.43□□□□□ -0.1
HLA-C-206ENST00000470363 GPR25O00155 361 aa14.42□□□□□ -0.1
HLA-C-206ENST00000470363 IPO8O15397 1037 aaKnown RBP14.42□□□□□ -0.1
HLA-C-206ENST00000470363 MYO1BO43795 1136 aa14.42□□□□□ -0.1
HLA-C-206ENST00000470363 PPP1R12BO60237 982 aaPredicted RBP14.42□□□□□ -0.1
HLA-C-206ENST00000470363 MLLT1Q03111 559 aaPredicted RBP14.42□□□□□ -0.1
HLA-C-206ENST00000470363 SREBF2Q12772 1141 aa14.42□□□□□ -0.1
HLA-C-206ENST00000470363 SUPT20HL1Q3ZLR7 823 aa14.42□□□□□ -0.1
HLA-C-206ENST00000470363 EXOC6Q8TAG9 804 aa14.42□□□□□ -0.1
HLA-C-206ENST00000470363 SLC10A4Q96EP9 437 aa14.42□□□□□ -0.1
HLA-C-206ENST00000470363 MRIQ9BWK5 157 aa14.42□□□□□ -0.1
HLA-C-206ENST00000470363 TDRD3Q9H7E2 651 aaKnown RBP14.42□□□□□ -0.1
HLA-C-206ENST00000470363 ZBTB48P10074 688 aaPredicted RBP14.41□□□□□ -0.1
HLA-C-206ENST00000470363 GJA5P36382 358 aa14.41□□□□□ -0.1
HLA-C-206ENST00000470363 CRKP46108 304 aa14.41□□□□□ -0.1
HLA-C-206ENST00000470363 BCAMP50895 628 aa14.41□□□□□ -0.1
HLA-C-206ENST00000470363 INHBEP58166 350 aa14.41□□□□□ -0.1
HLA-C-206ENST00000470363 HDLBPQ00341 1268 aaKnown RBP14.41□□□□□ -0.1
HLA-C-206ENST00000470363 METTL24Q5JXM2 366 aa14.41□□□□□ -0.1
HLA-C-206ENST00000470363 ATG9AQ7Z3C6 839 aa14.41□□□□□ -0.1
HLA-C-206ENST00000470363 CDAN1Q8IWY9 1227 aa14.41□□□□□ -0.1
HLA-C-206ENST00000470363 WNK4Q96J92 1243 aa14.41□□□□□ -0.1
HLA-C-206ENST00000470363 VEZTQ9HBM0 779 aa14.41□□□□□ -0.1
HLA-C-206ENST00000470363 COG6Q9Y2V7 657 aa14.41□□□□□ -0.1
HLA-C-206ENST00000470363 TESPA1A2RU30 521 aaPredicted RBP14.4□□□□□ -0.1
HLA-C-206ENST00000470363 RBM5P52756 815 aaKnown RBP eCLIP14.4□□□□□ -0.1
HLA-C-206ENST00000470363 PDE3AQ14432 1141 aa14.4□□□□□ -0.1
HLA-C-206ENST00000470363 IFNL1Q8IU54 200 aa14.4□□□□□ -0.1
HLA-C-206ENST00000470363 ARHGAP45Q92619 1136 aa14.4□□□□□ -0.1
HLA-C-206ENST00000470363 IQSEC3Q9UPP2 1182 aaPredicted RBP14.4□□□□□ -0.1
HLA-C-206ENST00000470363 MANSC4A6NHS7 340 aaPredicted RBP14.39□□□□□ -0.11
HLA-C-206ENST00000470363 EYA2O00167 538 aa14.39□□□□□ -0.11
HLA-C-206ENST00000470363 IGF2BP3O00425 579 aaKnown RBP eCLIP14.39□□□□□ -0.11
HLA-C-206ENST00000470363 PKN2Q16513 984 aaKnown RBP14.39□□□□□ -0.11
HLA-C-206ENST00000470363 CAVIN4Q5BKX8 364 aa14.39□□□□□ -0.11
HLA-C-206ENST00000470363 FTSJ3Q8IY81 847 aaKnown RBP14.39□□□□□ -0.11
HLA-C-206ENST00000470363 TMEM57Q8N5G2 664 aa14.39□□□□□ -0.11
HLA-C-206ENST00000470363 PTPN18Q99952 460 aa14.39□□□□□ -0.11
HLA-C-206ENST00000470363 API5Q9BZZ5 524 aaKnown RBP14.39□□□□□ -0.11
HLA-C-206ENST00000470363 CENPFP49454 3210 aa14.39□□□□□ -0.11
HLA-C-206ENST00000470363 ECM29Q5VYK3 1845 aa14.38□□□□□ -0.11
HLA-C-206ENST00000470363 ALDH1A1P00352 501 aa14.38□□□□□ -0.11
HLA-C-206ENST00000470363 IREB2P48200 963 aaKnown RBP14.38□□□□□ -0.11
HLA-C-206ENST00000470363 TNFAIP1Q13829 316 aa14.38□□□□□ -0.11
HLA-C-206ENST00000470363 PUM3Q15397 648 aaKnown RBP14.38□□□□□ -0.11
HLA-C-206ENST00000470363 APOBEC3HQ6NTF7 200 aaKnown RBP14.38□□□□□ -0.11
HLA-C-206ENST00000470363 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.38□□□□□ -0.11
HLA-C-206ENST00000470363 ANKRD13AQ8IZ07 590 aa14.38□□□□□ -0.11
HLA-C-206ENST00000470363 TBC1D22AQ8WUA7 517 aa14.38□□□□□ -0.11
HLA-C-206ENST00000470363 MS4A4AQ96JQ5 239 aa14.38□□□□□ -0.11
HLA-C-206ENST00000470363 ZDHHC15Q96MV8 337 aa14.38□□□□□ -0.11
HLA-C-206ENST00000470363 HPS5Q9UPZ3 1129 aa14.38□□□□□ -0.11
HLA-C-206ENST00000470363 SUGT1Q9Y2Z0 365 aa14.38□□□□□ -0.11
HLA-C-206ENST00000470363 MS4A1P11836 297 aa14.37□□□□□ -0.11
HLA-C-206ENST00000470363 VPS37DQ86XT2 251 aa14.37□□□□□ -0.11
HLA-C-206ENST00000470363 TMEM39BQ9GZU3 492 aa14.37□□□□□ -0.11
HLA-C-206ENST00000470363 FBXO3Q9UK99 471 aa14.37□□□□□ -0.11
HLA-C-206ENST00000470363 MKI67P46013 3256 aaKnown RBP14.37□□□□□ -0.11
HLA-C-206ENST00000470363 TCP10L2B9ZVM9 353 aa14.36□□□□□ -0.11
HLA-C-206ENST00000470363 ZBTB22O15209 634 aa14.36□□□□□ -0.11
HLA-C-206ENST00000470363 FKTNO75072 461 aa14.36□□□□□ -0.11
HLA-C-206ENST00000470363 CHAF1AQ13111 956 aaPredicted RBP14.36□□□□□ -0.11
HLA-C-206ENST00000470363 HHIPL2Q6UWX4 724 aa14.36□□□□□ -0.11
HLA-C-206ENST00000470363 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.36□□□□□ -0.112e-7■□□□□ 10.1
HLA-C-206ENST00000470363 LPIN2Q92539 896 aa14.36□□□□□ -0.11
HLA-C-206ENST00000470363 LAMB1P07942 1786 aa14.36□□□□□ -0.11
HLA-C-206ENST00000470363 BRCA2P51587 3418 aa14.35□□□□□ -0.11
HLA-C-206ENST00000470363 CIAO1O76071 339 aa14.35□□□□□ -0.11
HLA-C-206ENST00000470363 IFIT1P09914 478 aaKnown RBP14.35□□□□□ -0.11
HLA-C-206ENST00000470363 MVPQ14764 893 aaKnown RBP14.35□□□□□ -0.11
HLA-C-206ENST00000470363 FKBP1CQ5VVH2 108 aa14.35□□□□□ -0.11
HLA-C-206ENST00000470363 ITPRIPQ8IWB1 547 aa14.35□□□□□ -0.11
HLA-C-206ENST00000470363 TEKT1Q969V4 418 aa14.35□□□□□ -0.11
HLA-C-206ENST00000470363 ARAP2Q8WZ64 1704 aa14.35□□□□□ -0.11
HLA-C-206ENST00000470363 CACNB3P54284 484 aa14.34□□□□□ -0.11
HLA-C-206ENST00000470363 SOX10P56693 466 aa14.34□□□□□ -0.11
HLA-C-206ENST00000470363 MAP3K9P80192 1104 aa14.34□□□□□ -0.11
HLA-C-206ENST00000470363 CAP1Q01518 475 aa14.34□□□□□ -0.11
HLA-C-206ENST00000470363 FBXO46Q6PJ61 603 aaPredicted RBP14.34□□□□□ -0.11
HLA-C-206ENST00000470363 FAM83AQ86UY5 434 aa14.34□□□□□ -0.11
HLA-C-206ENST00000470363 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
HLA-C-206ENST00000470363 OPTNQ96CV9 577 aa14.34□□□□□ -0.11
HLA-C-206ENST00000470363 FRAT2O75474 233 aaPredicted RBP14.33□□□□□ -0.12
HLA-C-206ENST00000470363 UBTFL1P0CB47 393 aaPredicted RBP14.33□□□□□ -0.12
HLA-C-206ENST00000470363 CRHR2Q13324 411 aa14.33□□□□□ -0.12
HLA-C-206ENST00000470363 VGLL4Q14135 290 aa14.33□□□□□ -0.12
HLA-C-206ENST00000470363 INTS3Q68E01 1043 aaKnown RBP14.33□□□□□ -0.12
HLA-C-206ENST00000470363 ELP3Q9H9T3 547 aa14.33□□□□□ -0.12
HLA-C-206ENST00000470363 COPRSQ9NQ92 184 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms