RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 LMOD1P29536 600 aaPredicted RBP18.44■□□□□ 0.54
SNIP1-202ENST00000468040 LRRFIP1Q32MZ4 808 aaKnown RBP18.44■□□□□ 0.54
SNIP1-202ENST00000468040 KBTBD3Q8NAB2 608 aa18.44■□□□□ 0.54
SNIP1-202ENST00000468040 DOCK2Q92608 1830 aa18.44■□□□□ 0.54
SNIP1-202ENST00000468040 MAST2Q6P0Q8 1798 aa18.43■□□□□ 0.54
SNIP1-202ENST00000468040 F8W031 263 aaPredicted RBP18.43■□□□□ 0.54
SNIP1-202ENST00000468040 MAP4K4O95819 1239 aaPredicted RBP18.43■□□□□ 0.54
SNIP1-202ENST00000468040 SCNN1DP51172 638 aa18.43■□□□□ 0.54
SNIP1-202ENST00000468040 GSTO1P78417 241 aa18.43■□□□□ 0.54
SNIP1-202ENST00000468040 HDLBPQ00341 1268 aaKnown RBP18.43■□□□□ 0.54
SNIP1-202ENST00000468040 GRIK5Q16478 980 aa18.43■□□□□ 0.54
SNIP1-202ENST00000468040 ZSCAN25Q6NSZ9 544 aa18.43■□□□□ 0.54
SNIP1-202ENST00000468040 TICAM2Q86XR7 235 aa18.43■□□□□ 0.54
SNIP1-202ENST00000468040 SLF2Q8IX21 1173 aa18.43■□□□□ 0.54
SNIP1-202ENST00000468040 GPRC5DQ9NZD1 345 aa18.43■□□□□ 0.54
SNIP1-202ENST00000468040 IQCA1LA6NCM1 817 aa18.42■□□□□ 0.54
SNIP1-202ENST00000468040 H7C1D1 291 aa18.42■□□□□ 0.54
SNIP1-202ENST00000468040 GSPT1P15170 499 aaKnown RBP18.42■□□□□ 0.54
SNIP1-202ENST00000468040 MECOMQ03112 1051 aa18.42■□□□□ 0.54
SNIP1-202ENST00000468040 MICALL2Q8IY33 904 aa18.42■□□□□ 0.54
SNIP1-202ENST00000468040 FSD1Q9BTV5 496 aa18.42■□□□□ 0.54
SNIP1-202ENST00000468040 MRIQ9BWK5 157 aa18.42■□□□□ 0.54
SNIP1-202ENST00000468040 CNOT7Q9UIV1 285 aaKnown RBP18.42■□□□□ 0.54
SNIP1-202ENST00000468040 SERPINA10Q9UK55 444 aa18.42■□□□□ 0.54
SNIP1-202ENST00000468040 WDR90Q96KV7 1748 aa18.41■□□□□ 0.54
SNIP1-202ENST00000468040 ZNF280AP59817 542 aaPredicted RBP18.41■□□□□ 0.54
SNIP1-202ENST00000468040 BMP2KLQ5H9B9 411 aa18.41■□□□□ 0.54
SNIP1-202ENST00000468040 NAA16Q6N069 864 aaPredicted RBP18.41■□□□□ 0.54
SNIP1-202ENST00000468040 TEKT1Q969V4 418 aa18.41■□□□□ 0.54
SNIP1-202ENST00000468040 RILPL2Q969X0 211 aa18.41■□□□□ 0.54
SNIP1-202ENST00000468040 NSUN4Q96CB9 384 aaKnown RBP18.41■□□□□ 0.54
SNIP1-202ENST00000468040 RFX7Q2KHR2 1363 aa18.41■□□□□ 0.54
SNIP1-202ENST00000468040 LDHCP07864 332 aa18.4■□□□□ 0.54
SNIP1-202ENST00000468040 ZFYP08048 801 aaPredicted RBP18.4■□□□□ 0.54
SNIP1-202ENST00000468040 SLC9C2Q5TAH2 1124 aa18.4■□□□□ 0.54
SNIP1-202ENST00000468040 HHIPL2Q6UWX4 724 aa18.4■□□□□ 0.54
SNIP1-202ENST00000468040 SCN4AP35499 1836 aa18.39■□□□□ 0.54
SNIP1-202ENST00000468040 PDE6AP16499 860 aa18.39■□□□□ 0.53
SNIP1-202ENST00000468040 SDSP20132 328 aa18.39■□□□□ 0.53
SNIP1-202ENST00000468040 CRKP46108 304 aa18.39■□□□□ 0.53
SNIP1-202ENST00000468040 MAGEB6Q8N7X4 407 aa18.39■□□□□ 0.53
SNIP1-202ENST00000468040 FAM163AQ96GL9 167 aaPredicted RBP18.39■□□□□ 0.53
SNIP1-202ENST00000468040 HACL1Q9UJ83 578 aa18.39■□□□□ 0.53
SNIP1-202ENST00000468040 MYO5AQ9Y4I1 1855 aaKnown RBP18.39■□□□□ 0.53
SNIP1-202ENST00000468040 ADD2P35612 726 aa18.38■□□□□ 0.53
SNIP1-202ENST00000468040 UBE3CQ15386 1083 aa18.38■□□□□ 0.53
SNIP1-202ENST00000468040 DIXDC1Q155Q3 683 aa18.38■□□□□ 0.53
SNIP1-202ENST00000468040 ZDHHC15Q96MV8 337 aa18.38■□□□□ 0.53
SNIP1-202ENST00000468040 MYOZ2Q9NPC6 264 aa18.38■□□□□ 0.53
SNIP1-202ENST00000468040 ADARB2Q9NS39 739 aaKnown RBP18.38■□□□□ 0.53
SNIP1-202ENST00000468040 MYH7P12883 1935 aa18.38■□□□□ 0.53
SNIP1-202ENST00000468040 AK9Q5TCS8 1911 aa18.38■□□□□ 0.53
SNIP1-202ENST00000468040 MROH7-TTC4A0A0A0MT08 1334 aa18.38■□□□□ 0.53
SNIP1-202ENST00000468040 GAKO14976 1311 aa18.38■□□□□ 0.53
SNIP1-202ENST00000468040 HIP1O00291 1037 aa18.37■□□□□ 0.53
SNIP1-202ENST00000468040 RNF113AO15541 343 aaKnown RBP18.37■□□□□ 0.53
SNIP1-202ENST00000468040 CYP7A1P22680 504 aa18.37■□□□□ 0.53
SNIP1-202ENST00000468040 EPS15P42566 896 aa18.37■□□□□ 0.53
SNIP1-202ENST00000468040 RBM5P52756 815 aaKnown RBP eCLIP18.37■□□□□ 0.53
SNIP1-202ENST00000468040 DLGAP5Q15398 846 aa18.37■□□□□ 0.53
SNIP1-202ENST00000468040 CFAP100Q494V2 611 aa18.37■□□□□ 0.53
SNIP1-202ENST00000468040 MTMR14Q8NCE2 650 aa18.37■□□□□ 0.53
SNIP1-202ENST00000468040 ZNF384Q8TF68 577 aa18.37■□□□□ 0.53
SNIP1-202ENST00000468040 ZNF532Q9HCE3 1301 aa18.37■□□□□ 0.53
SNIP1-202ENST00000468040 SHTN1A0MZ66 631 aa18.36■□□□□ 0.53
SNIP1-202ENST00000468040 VEGFAP15692 232 aaPredicted RBP18.36■□□□□ 0.53
SNIP1-202ENST00000468040 EPHX2P34913 555 aa18.36■□□□□ 0.53
SNIP1-202ENST00000468040 KIF4BQ2VIQ3 1234 aa18.36■□□□□ 0.53
SNIP1-202ENST00000468040 NOL10Q9BSC4 688 aaKnown RBP18.36■□□□□ 0.53
SNIP1-202ENST00000468040 MYH2Q9UKX2 1941 aa18.36■□□□□ 0.53
SNIP1-202ENST00000468040 DAGLAQ9Y4D2 1042 aa18.36■□□□□ 0.53
SNIP1-202ENST00000468040 TCRBV5S4A2TA0A5A2 114 aa18.35■□□□□ 0.53
SNIP1-202ENST00000468040 MYO1BO43795 1136 aa18.35■□□□□ 0.53
SNIP1-202ENST00000468040 BAG3O95817 575 aa18.35■□□□□ 0.53
SNIP1-202ENST00000468040 USP50Q70EL3 339 aaPredicted RBP18.35■□□□□ 0.53
SNIP1-202ENST00000468040 SAMD7Q7Z3H4 446 aa18.35■□□□□ 0.53
SNIP1-202ENST00000468040 CERS3Q8IU89 383 aa18.35■□□□□ 0.53
SNIP1-202ENST00000468040 ZNF526Q8TF50 670 aaPredicted RBP18.35■□□□□ 0.53
SNIP1-202ENST00000468040 APPBP2Q92624 585 aa18.35■□□□□ 0.53
SNIP1-202ENST00000468040 TAF1DQ9H5J8 278 aaPredicted RBP18.35■□□□□ 0.53
SNIP1-202ENST00000468040 GPR75-ASB3A0A0A6YYF3 556 aa18.34■□□□□ 0.53
SNIP1-202ENST00000468040 SPDYE2BA6NHP3 402 aa18.34■□□□□ 0.53
SNIP1-202ENST00000468040 POTECB2RU33 542 aa18.34■□□□□ 0.53
SNIP1-202ENST00000468040 SPDYE6P0CI01 402 aa18.34■□□□□ 0.53
SNIP1-202ENST00000468040 YY1P25490 414 aa18.34■□□□□ 0.53
SNIP1-202ENST00000468040 TBC1D10BQ4KMP7 808 aaPredicted RBP18.34■□□□□ 0.53
SNIP1-202ENST00000468040 RBM26Q5T8P6 1007 aaKnown RBP18.34■□□□□ 0.53
SNIP1-202ENST00000468040 PNMA8AQ86V59 439 aaPredicted RBP18.34■□□□□ 0.53
SNIP1-202ENST00000468040 DIAPH3Q9NSV4 1193 aa18.34■□□□□ 0.53
SNIP1-202ENST00000468040 ADAMTSL1Q8N6G6 1762 aa18.33■□□□□ 0.53
SNIP1-202ENST00000468040 PLCG2P16885 1265 aa18.33■□□□□ 0.52
SNIP1-202ENST00000468040 BTDP43251 543 aa18.33■□□□□ 0.52
SNIP1-202ENST00000468040 APOBEC3HQ6NTF7 200 aaKnown RBP18.33■□□□□ 0.52
SNIP1-202ENST00000468040 ADGRA1Q86SQ6 560 aa18.33■□□□□ 0.52
SNIP1-202ENST00000468040 TRPM4Q8TD43 1214 aa18.33■□□□□ 0.52
SNIP1-202ENST00000468040 ZBED3Q96IU2 234 aaPredicted RBP18.33■□□□□ 0.52
SNIP1-202ENST00000468040 RRAGCQ9HB90 399 aa18.33■□□□□ 0.52
SNIP1-202ENST00000468040 GPBP1L1Q9HC44 474 aaPredicted RBP18.33■□□□□ 0.52
SNIP1-202ENST00000468040 MAGEB6P1A0A0J9YX57 407 aa18.32■□□□□ 0.52
SNIP1-202ENST00000468040 WNT10BO00744 389 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms