RNA–Protein interactions for RNA: ENST00000467789.5

SSR3-205, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2 BASIC

Gene SSR3, Length 1,039 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-205ENST00000467789 IFIT1P09914 478 aaKnown RBP12.94□□□□□ -0.34
SSR3-205ENST00000467789 GYG1P46976 350 aa12.94□□□□□ -0.34
SSR3-205ENST00000467789 PUM3Q15397 648 aaKnown RBP12.94□□□□□ -0.34
SSR3-205ENST00000467789 LRRC24Q50LG9 513 aa12.94□□□□□ -0.34
SSR3-205ENST00000467789 MFSD14BQ5SR56 506 aa12.94□□□□□ -0.34
SSR3-205ENST00000467789 INTS3Q68E01 1043 aaKnown RBP12.94□□□□□ -0.34
SSR3-205ENST00000467789 FBXO33Q7Z6M2 555 aa12.94□□□□□ -0.34
SSR3-205ENST00000467789 TBC1D22AQ8WUA7 517 aa12.94□□□□□ -0.34
SSR3-205ENST00000467789 RNF25Q96BH1 459 aaPredicted RBP12.94□□□□□ -0.34
SSR3-205ENST00000467789 MS4A3Q96HJ5 214 aa12.94□□□□□ -0.34
SSR3-205ENST00000467789 SERPINA10Q9UK55 444 aa12.94□□□□□ -0.34
SSR3-205ENST00000467789 UNCXA6NJT0 531 aa12.93□□□□□ -0.34
SSR3-205ENST00000467789 GABBR2O75899 941 aa12.93□□□□□ -0.34
SSR3-205ENST00000467789 CIAO1O76071 339 aa12.93□□□□□ -0.34
SSR3-205ENST00000467789 GNAI3P08754 354 aa12.93□□□□□ -0.34
SSR3-205ENST00000467789 RFX5P48382 616 aaPredicted RBP12.93□□□□□ -0.34
SSR3-205ENST00000467789 PTPN12Q05209 780 aaKnown RBP12.93□□□□□ -0.34
SSR3-205ENST00000467789 CFAP100Q494V2 611 aa12.93□□□□□ -0.34
SSR3-205ENST00000467789 SAGE1Q9NXZ1 904 aa12.93□□□□□ -0.34
SSR3-205ENST00000467789 AKAP11Q9UKA4 1901 aa12.92□□□□□ -0.34
SSR3-205ENST00000467789 FRAT2O75474 233 aaPredicted RBP12.92□□□□□ -0.34
SSR3-205ENST00000467789 FGFR2P21802 821 aa12.92□□□□□ -0.34
SSR3-205ENST00000467789 HDLBPQ00341 1268 aaKnown RBP12.92□□□□□ -0.34
SSR3-205ENST00000467789 PDAP1Q13442 181 aaKnown RBP12.92□□□□□ -0.34
SSR3-205ENST00000467789 TNFAIP1Q13829 316 aa12.92□□□□□ -0.34
SSR3-205ENST00000467789 ARMC9Q7Z3E5 817 aa12.92□□□□□ -0.34
SSR3-205ENST00000467789 KLHDC4Q8TBB5 520 aa12.92□□□□□ -0.34
SSR3-205ENST00000467789 LPIN2Q92539 896 aa12.92□□□□□ -0.34
SSR3-205ENST00000467789 DEFB129Q9H1M3 183 aa12.92□□□□□ -0.34
SSR3-205ENST00000467789 SUGT1Q9Y2Z0 365 aa12.92□□□□□ -0.34
SSR3-205ENST00000467789 F8W031 263 aaPredicted RBP12.91□□□□□ -0.34
SSR3-205ENST00000467789 SLC5A1P13866 664 aa12.91□□□□□ -0.34
SSR3-205ENST00000467789 RBM5P52756 815 aaKnown RBP eCLIP12.91□□□□□ -0.34
SSR3-205ENST00000467789 KIF23Q02241 960 aaPredicted RBP12.91□□□□□ -0.34
SSR3-205ENST00000467789 TTLL12Q14166 644 aaPredicted RBP12.91□□□□□ -0.34
SSR3-205ENST00000467789 SUPT20HL1Q3ZLR7 823 aa12.91□□□□□ -0.34
SSR3-205ENST00000467789 MRIQ9BWK5 157 aa12.91□□□□□ -0.34
SSR3-205ENST00000467789 PCDHB8Q9UN66 801 aa12.91□□□□□ -0.34
SSR3-205ENST00000467789 TTF2Q9UNY4 1162 aaKnown RBP12.91□□□□□ -0.34
SSR3-205ENST00000467789 MAST3O60307 1309 aa12.9□□□□□ -0.34
SSR3-205ENST00000467789 MYH13Q9UKX3 1938 aa12.9□□□□□ -0.34
SSR3-205ENST00000467789 PPP1R12BO60237 982 aaPredicted RBP12.9□□□□□ -0.34
SSR3-205ENST00000467789 IL15P40933 162 aaPredicted RBP12.9□□□□□ -0.34
SSR3-205ENST00000467789 HNRNPUQ00839 825 aaKnown RBP eCLIP12.9□□□□□ -0.34
SSR3-205ENST00000467789 MTX1Q13505 466 aa12.9□□□□□ -0.34
SSR3-205ENST00000467789 ATF7IPQ6VMQ6 1270 aa12.9□□□□□ -0.34
SSR3-205ENST00000467789 ATG9AQ7Z3C6 839 aa12.9□□□□□ -0.34
SSR3-205ENST00000467789 RASAL3Q86YV0 1011 aa12.9□□□□□ -0.34
SSR3-205ENST00000467789 PRMT6Q96LA8 375 aaPredicted RBP12.9□□□□□ -0.34
SSR3-205ENST00000467789 COPRSQ9NQ92 184 aa12.9□□□□□ -0.34
SSR3-205ENST00000467789 CEP126Q9P2H0 1117 aa12.9□□□□□ -0.34
SSR3-205ENST00000467789 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
SSR3-205ENST00000467789 UBE2Q2LH0YL09 131 aa12.89□□□□□ -0.35
SSR3-205ENST00000467789 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
SSR3-205ENST00000467789 TIE1P35590 1138 aa12.89□□□□□ -0.35
SSR3-205ENST00000467789 MAP3K11Q16584 847 aa12.89□□□□□ -0.35
SSR3-205ENST00000467789 PRAMEF18Q5VWM3 479 aa12.89□□□□□ -0.35
SSR3-205ENST00000467789 WDR66Q8TBY9 1149 aa12.89□□□□□ -0.35
SSR3-205ENST00000467789 CSRNP1Q96S65 589 aa12.89□□□□□ -0.35
SSR3-205ENST00000467789 ZIC5Q96T25 663 aa12.89□□□□□ -0.35
SSR3-205ENST00000467789 MEIS3Q99687 375 aa12.89□□□□□ -0.35
SSR3-205ENST00000467789 SCAF8Q9UPN6 1271 aaKnown RBP12.89□□□□□ -0.35
SSR3-205ENST00000467789 JAG2Q9Y219 1238 aa12.89□□□□□ -0.35
SSR3-205ENST00000467789 TRIM27P14373 513 aa12.88□□□□□ -0.35
SSR3-205ENST00000467789 TNNI2P48788 182 aa12.88□□□□□ -0.35
SSR3-205ENST00000467789 BCAMP50895 628 aa12.88□□□□□ -0.35
SSR3-205ENST00000467789 ATP2B3Q16720 1220 aa12.88□□□□□ -0.35
SSR3-205ENST00000467789 LDLRAD1Q5T700 205 aa12.88□□□□□ -0.35
SSR3-205ENST00000467789 DZIP1LQ8IYY4 767 aaKnown RBP12.88□□□□□ -0.35
SSR3-205ENST00000467789 TEKT1Q969V4 418 aa12.88□□□□□ -0.35
SSR3-205ENST00000467789 VEZTQ9HBM0 779 aa12.88□□□□□ -0.35
SSR3-205ENST00000467789 GNL3LQ9NVN8 582 aaKnown RBP12.88□□□□□ -0.35
SSR3-205ENST00000467789 CLRN2A0PK11 232 aa12.87□□□□□ -0.35
SSR3-205ENST00000467789 SEMA3EO15041 775 aa12.87□□□□□ -0.35
SSR3-205ENST00000467789 CRKP46108 304 aa12.87□□□□□ -0.35
SSR3-205ENST00000467789 SREBF2Q12772 1141 aa12.87□□□□□ -0.35
SSR3-205ENST00000467789 CHAF1AQ13111 956 aaPredicted RBP12.87□□□□□ -0.35
SSR3-205ENST00000467789 ZKSCAN2Q63HK3 967 aa12.87□□□□□ -0.35
SSR3-205ENST00000467789 MOB2Q70IA6 237 aa12.87□□□□□ -0.35
SSR3-205ENST00000467789 FRAT1Q92837 279 aaPredicted RBP12.87□□□□□ -0.35
SSR3-205ENST00000467789 SIL1Q9H173 461 aa12.87□□□□□ -0.35
SSR3-205ENST00000467789 RNF186Q9NXI6 227 aa12.87□□□□□ -0.35
SSR3-205ENST00000467789 ZNF70Q9UC06 446 aaPredicted RBP12.87□□□□□ -0.35
SSR3-205ENST00000467789 ANGEL1Q9UNK9 670 aaKnown RBP12.87□□□□□ -0.35
SSR3-205ENST00000467789 IQSEC3Q9UPP2 1182 aaPredicted RBP12.87□□□□□ -0.35
SSR3-205ENST00000467789 ZBED9Q6R2W3 1325 aa12.87□□□□□ -0.35
SSR3-205ENST00000467789 SRGAP3O43295 1099 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 BCAR3O75815 825 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 GNAI2P04899 355 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 ZBTB48P10074 688 aaPredicted RBP12.86□□□□□ -0.35
SSR3-205ENST00000467789 IREB2P48200 963 aaKnown RBP12.86□□□□□ -0.35
SSR3-205ENST00000467789 TM4SF4P48230 202 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 INHBEP58166 350 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 RASA3Q14644 834 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 FKBP1CQ5VVH2 108 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 HHIPL2Q6UWX4 724 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 ZDHHC15Q96MV8 337 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 TDRD3Q9H7E2 651 aaKnown RBP12.86□□□□□ -0.35
SSR3-205ENST00000467789 TSKSQ9UJT2 592 aa12.86□□□□□ -0.35
SSR3-205ENST00000467789 AKAP2Q9Y2D5 859 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms