RNA–Protein interactions for RNA: ENST00000467238.1

SND1-205, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-205ENST00000467238 PNMA8AQ86V59 439 aaPredicted RBP9.13□□□□□ -0.95
SND1-205ENST00000467238 SP8Q8IXZ3 490 aa9.13□□□□□ -0.95
SND1-205ENST00000467238 NIM1KQ8IY84 436 aa9.13□□□□□ -0.95
SND1-205ENST00000467238 GRAPLQ8TC17 118 aaPredicted RBP9.13□□□□□ -0.95
SND1-205ENST00000467238 TMX4Q9H1E5 349 aaPredicted RBP9.13□□□□□ -0.95
SND1-205ENST00000467238 VPS33BQ9H267 617 aa9.13□□□□□ -0.95
SND1-205ENST00000467238 SLC27A5Q9Y2P5 690 aa9.13□□□□□ -0.95
SND1-205ENST00000467238 GJA3Q9Y6H8 435 aa9.13□□□□□ -0.95
SND1-205ENST00000467238 CNTNAP1P78357 1384 aa9.12□□□□□ -0.95
SND1-205ENST00000467238 ATP5J2-PTCD1G3V325 749 aa9.12□□□□□ -0.95
SND1-205ENST00000467238 ZBTB24O43167 697 aaPredicted RBP9.12□□□□□ -0.95
SND1-205ENST00000467238 FMNL1O95466 1100 aaPredicted RBP9.12□□□□□ -0.95
SND1-205ENST00000467238 HSPA1AP0DMV8 641 aaKnown RBP9.12□□□□□ -0.95
SND1-205ENST00000467238 HSPA1BP0DMV9 641 aaKnown RBP9.12□□□□□ -0.95
SND1-205ENST00000467238 FECHP22830 423 aa9.12□□□□□ -0.95
SND1-205ENST00000467238 LMOD1P29536 600 aaPredicted RBP9.12□□□□□ -0.95
SND1-205ENST00000467238 GNAI1P63096 354 aa9.12□□□□□ -0.95
SND1-205ENST00000467238 CALD1Q05682 793 aaKnown RBP9.12□□□□□ -0.95
SND1-205ENST00000467238 AOC3Q16853 763 aa9.12□□□□□ -0.95
SND1-205ENST00000467238 MPNDQ8N594 471 aa9.12□□□□□ -0.95
SND1-205ENST00000467238 IRF7Q92985 503 aa9.12□□□□□ -0.95
SND1-205ENST00000467238 ZNF428Q96B54 188 aa9.12□□□□□ -0.95
SND1-205ENST00000467238 MKRN1Q9UHC7 482 aaKnown RBP9.12□□□□□ -0.95
SND1-205ENST00000467238 TMEM88BA6NKF7 163 aa9.11□□□□□ -0.95
SND1-205ENST00000467238 EPS15P42566 896 aa9.11□□□□□ -0.95
SND1-205ENST00000467238 TRIM28Q13263 835 aaKnown RBP9.11□□□□□ -0.95
SND1-205ENST00000467238 SF3B3Q15393 1217 aaKnown RBP9.11□□□□□ -0.95
SND1-205ENST00000467238 COL13A1Q5TAT6 717 aaPredicted RBP9.11□□□□□ -0.95
SND1-205ENST00000467238 MAP1SQ66K74 1059 aaPredicted RBP9.11□□□□□ -0.95
SND1-205ENST00000467238 DPP8Q6V1X1 898 aaPredicted RBP9.11□□□□□ -0.95
SND1-205ENST00000467238 TMC4Q7Z404 712 aa9.11□□□□□ -0.95
SND1-205ENST00000467238 CNTROBQ8N137 903 aa9.11□□□□□ -0.95
SND1-205ENST00000467238 SUPT20HQ8NEM7 779 aa9.11□□□□□ -0.95
SND1-205ENST00000467238 FAM89AQ96GI7 184 aa9.11□□□□□ -0.95
SND1-205ENST00000467238 ZNRF3Q9ULT6 936 aa9.11□□□□□ -0.95
SND1-205ENST00000467238 H3BM21 787 aa9.1□□□□□ -0.95
SND1-205ENST00000467238 ELL2O00472 640 aaPredicted RBP9.1□□□□□ -0.95
SND1-205ENST00000467238 CXCL9Q07325 125 aa9.1□□□□□ -0.95
SND1-205ENST00000467238 KIAA2012Q0VF49 1180 aa9.1□□□□□ -0.95
SND1-205ENST00000467238 CCDC184Q52MB2 194 aa9.1□□□□□ -0.95
SND1-205ENST00000467238 BRICD5Q6PL45 260 aa9.1□□□□□ -0.95
SND1-205ENST00000467238 C8orf58Q8NAV2 365 aa9.1□□□□□ -0.95
SND1-205ENST00000467238 CELF1Q92879 486 aaKnown RBP9.1□□□□□ -0.95
SND1-205ENST00000467238 PHAXQ9H814 394 aaKnown RBP9.1□□□□□ -0.95
SND1-205ENST00000467238 CASP8AP2Q9UKL3 1982 aa9.1□□□□□ -0.95
SND1-205ENST00000467238 PDE4DIPQ5VU43 2346 aa9.09□□□□□ -0.95
SND1-205ENST00000467238 IRS4O14654 1257 aaPredicted RBP9.09□□□□□ -0.95
SND1-205ENST00000467238 GSK3AP49840 483 aa9.09□□□□□ -0.95
SND1-205ENST00000467238 RTL5Q5HYW3 569 aaPredicted RBP9.09□□□□□ -0.95
SND1-205ENST00000467238 USP50Q70EL3 339 aaPredicted RBP9.09□□□□□ -0.95
SND1-205ENST00000467238 RIC3Q7Z5B4 369 aa9.09□□□□□ -0.95
SND1-205ENST00000467238 NPAS3Q8IXF0 933 aa9.09□□□□□ -0.95
SND1-205ENST00000467238 ADARB2Q9NS39 739 aaKnown RBP9.09□□□□□ -0.95
SND1-205ENST00000467238 GPRC5DQ9NZD1 345 aa9.09□□□□□ -0.95
SND1-205ENST00000467238 THSD7BQ9C0I4 1608 aa9.09□□□□□ -0.95
SND1-205ENST00000467238 CDHR2Q9BYE9 1310 aa9.08□□□□□ -0.96
SND1-205ENST00000467238 RASSF10A6NK89 507 aa9.08□□□□□ -0.96
SND1-205ENST00000467238 YDJCA8MPS7 323 aa9.08□□□□□ -0.96
SND1-205ENST00000467238 RAD17O75943 681 aa9.08□□□□□ -0.96
SND1-205ENST00000467238 CCDC27Q2M243 656 aa9.08□□□□□ -0.96
SND1-205ENST00000467238 CCDC30Q5VVM6 783 aa9.08□□□□□ -0.96
SND1-205ENST00000467238 CIAPIN1Q6FI81 312 aa9.08□□□□□ -0.96
SND1-205ENST00000467238 RNF19BQ6ZMZ0 732 aa9.08□□□□□ -0.96
SND1-205ENST00000467238 TRIM46Q7Z4K8 759 aa9.08□□□□□ -0.96
SND1-205ENST00000467238 TSPYL6Q8N831 410 aa9.08□□□□□ -0.96
SND1-205ENST00000467238 ZBTB38Q8NAP3 1195 aaPredicted RBP9.08□□□□□ -0.96
SND1-205ENST00000467238 CCDC191Q8NCU4 936 aa9.08□□□□□ -0.96
SND1-205ENST00000467238 MYD88Q99836 296 aa9.08□□□□□ -0.96
SND1-205ENST00000467238 DAXXQ9UER7 740 aaPredicted RBP9.08□□□□□ -0.96
SND1-205ENST00000467238 SALL2Q9Y467 1007 aaPredicted RBP9.08□□□□□ -0.96
SND1-205ENST00000467238 ZNF646O15015 1829 aaPredicted RBP9.08□□□□□ -0.96
SND1-205ENST00000467238 AKAP11Q9UKA4 1901 aa9.07□□□□□ -0.96
SND1-205ENST00000467238 PCCAP05165 728 aaPredicted RBP9.07□□□□□ -0.96
SND1-205ENST00000467238 BMP1P13497 986 aa9.07□□□□□ -0.96
SND1-205ENST00000467238 GMPSP49915 693 aaPredicted RBP9.07□□□□□ -0.96
SND1-205ENST00000467238 FMR1Q06787 632 aaKnown RBP eCLIP9.07□□□□□ -0.965e-8■■■□□ 16
SND1-205ENST00000467238 MSS51Q4VC12 460 aa9.07□□□□□ -0.96
SND1-205ENST00000467238 TSR2Q969E8 191 aaKnown RBP9.07□□□□□ -0.96
SND1-205ENST00000467238 METTL22Q9BUU2 404 aaPredicted RBP9.07□□□□□ -0.96
SND1-205ENST00000467238 CHMP4AQ9BY43 222 aa9.07□□□□□ -0.96
SND1-205ENST00000467238 SLC24A3Q9HC58 644 aa9.07□□□□□ -0.96
SND1-205ENST00000467238 POLLQ9UGP5 575 aa9.07□□□□□ -0.96
SND1-205ENST00000467238 NSFL1CQ9UNZ2 370 aaKnown RBP9.07□□□□□ -0.96
SND1-205ENST00000467238 A0A1B0GUL6 1792 aa9.07□□□□□ -0.96
SND1-205ENST00000467238 TRAF5O00463 557 aa9.06□□□□□ -0.96
SND1-205ENST00000467238 DDX58O95786 925 aaKnown RBP9.06□□□□□ -0.96
SND1-205ENST00000467238 HSP90B1P14625 803 aaKnown RBP9.06□□□□□ -0.96
SND1-205ENST00000467238 RPS8P62241 208 aaKnown RBP9.06□□□□□ -0.96
SND1-205ENST00000467238 GPSM2P81274 684 aa9.06□□□□□ -0.96
SND1-205ENST00000467238 TNIP1Q15025 636 aa9.06□□□□□ -0.96
SND1-205ENST00000467238 WASHC4Q2M389 1173 aa9.06□□□□□ -0.96
SND1-205ENST00000467238 DEFB115Q30KQ5 88 aa9.06□□□□□ -0.96
SND1-205ENST00000467238 WWC1Q8IX03 1113 aa9.06□□□□□ -0.96
SND1-205ENST00000467238 TNS4Q8IZW8 715 aa9.06□□□□□ -0.96
SND1-205ENST00000467238 KCTD17Q8N5Z5 321 aa9.06□□□□□ -0.96
SND1-205ENST00000467238 BCL2L13Q9BXK5 485 aa9.06□□□□□ -0.96
SND1-205ENST00000467238 SEC31BQ9NQW1 1179 aa9.06□□□□□ -0.96
SND1-205ENST00000467238 CWC25Q9NXE8 425 aaPredicted RBP9.06□□□□□ -0.96
SND1-205ENST00000467238 SHTN1A0MZ66 631 aa9.05□□□□□ -0.96
SND1-205ENST00000467238 PI4KAP2A4QPH2 592 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms