RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 DUOX1Q9NRD9 1551 aa18.19■□□□□ 0.5
SNED1-208ENST00000466618 A0A1B0GUL6 1792 aa18.19■□□□□ 0.5
SNED1-208ENST00000466618 INTS4Q96HW7 963 aaKnown RBP18.18■□□□□ 0.5
SNED1-208ENST00000466618 TMX4Q9H1E5 349 aaPredicted RBP18.18■□□□□ 0.5
SNED1-208ENST00000466618 TLR7Q9NYK1 1049 aaKnown RBP18.18■□□□□ 0.5
SNED1-208ENST00000466618 DBNLQ9UJU6 430 aaKnown RBP18.18■□□□□ 0.5
SNED1-208ENST00000466618 BCS1LQ9Y276 419 aa18.18■□□□□ 0.5
SNED1-208ENST00000466618 AP5Z1O43299 807 aa18.18■□□□□ 0.5
SNED1-208ENST00000466618 NCBP1Q09161 790 aaKnown RBP18.18■□□□□ 0.5
SNED1-208ENST00000466618 CHAF1AQ13111 956 aaPredicted RBP18.18■□□□□ 0.5
SNED1-208ENST00000466618 FOXD4L6Q3SYB3 417 aaPredicted RBP18.18■□□□□ 0.5
SNED1-208ENST00000466618 CCDC93Q567U6 631 aa18.18■□□□□ 0.5
SNED1-208ENST00000466618 SOGA3Q5TF21 947 aa18.18■□□□□ 0.5
SNED1-208ENST00000466618 DPP8Q6V1X1 898 aaPredicted RBP18.18■□□□□ 0.5
SNED1-208ENST00000466618 FOXD4L3Q6VB84 417 aaPredicted RBP18.18■□□□□ 0.5
SNED1-208ENST00000466618 C15orf52Q6ZUT6 534 aaKnown RBP18.18■□□□□ 0.5
SNED1-208ENST00000466618 ZNF771Q7L3S4 317 aaPredicted RBP18.18■□□□□ 0.5
SNED1-208ENST00000466618 CCDC8Q9H0W5 538 aaPredicted RBP18.18■□□□□ 0.5
SNED1-208ENST00000466618 GGA1Q9UJY5 639 aa18.18■□□□□ 0.5
SNED1-208ENST00000466618 MCM2P49736 904 aa18.17■□□□□ 0.5
SNED1-208ENST00000466618 TMEM87AQ8NBN3 555 aa18.17■□□□□ 0.5
SNED1-208ENST00000466618 NAP1L2Q9ULW6 460 aaPredicted RBP18.17■□□□□ 0.5
SNED1-208ENST00000466618 ADORA1P30542 326 aa18.17■□□□□ 0.5
SNED1-208ENST00000466618 RTKN2Q8IZC4 609 aa18.17■□□□□ 0.5
SNED1-208ENST00000466618 DBNDD2Q9BQY9 259 aa18.17■□□□□ 0.5
SNED1-208ENST00000466618 ZBTB22O15209 634 aa18.16■□□□□ 0.5
SNED1-208ENST00000466618 UFL1O94874 794 aa18.16■□□□□ 0.5
SNED1-208ENST00000466618 IFIT1P09914 478 aaKnown RBP18.16■□□□□ 0.5
SNED1-208ENST00000466618 SLC5A1P13866 664 aa18.16■□□□□ 0.5
SNED1-208ENST00000466618 KLRK1P26718 216 aa18.16■□□□□ 0.5
SNED1-208ENST00000466618 GABPB1Q06547 395 aaPredicted RBP18.16■□□□□ 0.5
SNED1-208ENST00000466618 XAGE2Q96GT9 111 aa18.16■□□□□ 0.5
SNED1-208ENST00000466618 NEUROD6Q96NK8 337 aa18.16■□□□□ 0.5
SNED1-208ENST00000466618 PSMD1Q99460 953 aa18.16■□□□□ 0.5
SNED1-208ENST00000466618 CTNNA3Q9UI47 895 aa18.16■□□□□ 0.5
SNED1-208ENST00000466618 TCHHQ07283 1943 aa18.16■□□□□ 0.5
SNED1-208ENST00000466618 IFIT2P09913 472 aaKnown RBP18.15■□□□□ 0.5
SNED1-208ENST00000466618 MX1P20591 662 aa18.15■□□□□ 0.5
SNED1-208ENST00000466618 TXNRD3Q86VQ6 643 aa18.15■□□□□ 0.5
SNED1-208ENST00000466618 FUCA2Q9BTY2 467 aa18.15■□□□□ 0.5
SNED1-208ENST00000466618 RPAP1Q9BWH6 1393 aaPredicted RBP18.15■□□□□ 0.5
SNED1-208ENST00000466618 CACNA1SQ13698 1873 aa18.15■□□□□ 0.5
SNED1-208ENST00000466618 KCNJ4P48050 445 aa18.15■□□□□ 0.5
SNED1-208ENST00000466618 STAP2Q9UGK3 403 aa18.15■□□□□ 0.5
SNED1-208ENST00000466618 GPR101Q96P66 508 aaPredicted RBP18.14■□□□□ 0.49
SNED1-208ENST00000466618 MED23Q9ULK4 1368 aa18.14■□□□□ 0.49
SNED1-208ENST00000466618 SLFN14P0C7P3 912 aa18.14■□□□□ 0.49
SNED1-208ENST00000466618 SYCP1Q15431 976 aa18.14■□□□□ 0.49
SNED1-208ENST00000466618 FAM84BQ96KN1 310 aaPredicted RBP18.14■□□□□ 0.49
SNED1-208ENST00000466618 OSBPL3Q9H4L5 887 aa18.14■□□□□ 0.49
SNED1-208ENST00000466618 C6orf229H3BNL8 230 aa18.13■□□□□ 0.49
SNED1-208ENST00000466618 FBXO33Q7Z6M2 555 aa18.13■□□□□ 0.49
SNED1-208ENST00000466618 PALD1Q9ULE6 856 aa18.13■□□□□ 0.49
SNED1-208ENST00000466618 NFKBIEO00221 500 aa18.13■□□□□ 0.49
SNED1-208ENST00000466618 PDE1AP54750 535 aa18.13■□□□□ 0.49
SNED1-208ENST00000466618 FKBP4Q02790 459 aaKnown RBP eCLIP18.13■□□□□ 0.49
SNED1-208ENST00000466618 NOL8Q76FK4 1167 aaKnown RBP18.13■□□□□ 0.49
SNED1-208ENST00000466618 TPM3P06753 285 aa18.12■□□□□ 0.49
SNED1-208ENST00000466618 YBX3P16989 372 aaKnown RBP eCLIP18.12■□□□□ 0.49
SNED1-208ENST00000466618 BCAMP50895 628 aa18.12■□□□□ 0.49
SNED1-208ENST00000466618 CCDC102BQ68D86 513 aa18.12■□□□□ 0.49
SNED1-208ENST00000466618 SUPT20HQ8NEM7 779 aa18.12■□□□□ 0.49
SNED1-208ENST00000466618 ZNF512BQ96KM6 892 aaPredicted RBP18.12■□□□□ 0.49
SNED1-208ENST00000466618 DDX41Q9UJV9 622 aaKnown RBP18.12■□□□□ 0.49
SNED1-208ENST00000466618 UTRNP46939 3433 aa18.12■□□□□ 0.49
SNED1-208ENST00000466618 TTC41PQ6P2S7 1318 aa18.12■□□□□ 0.49
SNED1-208ENST00000466618 LTBP3Q9NS15 1303 aa18.12■□□□□ 0.49
SNED1-208ENST00000466618 ARAP2Q8WZ64 1704 aa18.12■□□□□ 0.49
SNED1-208ENST00000466618 PHKA1P46020 1223 aa18.11■□□□□ 0.49
SNED1-208ENST00000466618 GYG1P46976 350 aa18.11■□□□□ 0.49
SNED1-208ENST00000466618 WASHC4Q2M389 1173 aa18.11■□□□□ 0.49
SNED1-208ENST00000466618 EYA3Q99504 573 aa18.11■□□□□ 0.49
SNED1-208ENST00000466618 ECHDC1Q9NTX5 307 aa18.11■□□□□ 0.49
SNED1-208ENST00000466618 WDR33Q9C0J8 1336 aaKnown RBP18.11■□□□□ 0.49
SNED1-208ENST00000466618 PI4K2BQ8TCG2 481 aa18.11■□□□□ 0.49
SNED1-208ENST00000466618 IPO4Q8TEX9 1081 aaKnown RBP18.11■□□□□ 0.49
SNED1-208ENST00000466618 VPS33BQ9H267 617 aa18.11■□□□□ 0.49
SNED1-208ENST00000466618 CNPY2Q9Y2B0 182 aa18.11■□□□□ 0.49
SNED1-208ENST00000466618 ARFGEF1Q9Y6D6 1849 aa18.11■□□□□ 0.49
SNED1-208ENST00000466618 VGLL3A8MV65 326 aa18.1■□□□□ 0.49
SNED1-208ENST00000466618 CAVIN4Q5BKX8 364 aa18.1■□□□□ 0.49
SNED1-208ENST00000466618 TSHZ3Q63HK5 1081 aa18.1■□□□□ 0.49
SNED1-208ENST00000466618 ATP5JP18859 108 aa18.1■□□□□ 0.49
SNED1-208ENST00000466618 ARID4AP29374 1257 aaPredicted RBP18.1■□□□□ 0.49
SNED1-208ENST00000466618 HIBADHP31937 336 aaKnown RBP18.1■□□□□ 0.49
SNED1-208ENST00000466618 PLCB2Q00722 1185 aa18.1■□□□□ 0.49
SNED1-208ENST00000466618 CCDC158Q5M9N0 1113 aa18.1■□□□□ 0.49
SNED1-208ENST00000466618 ZC3H12CQ9C0D7 883 aaKnown RBP18.1■□□□□ 0.49
SNED1-208ENST00000466618 AOX1Q06278 1338 aa18.1■□□□□ 0.49
SNED1-208ENST00000466618 GORABQ5T7V8 394 aa18.09■□□□□ 0.49
SNED1-208ENST00000466618 SPC24Q8NBT2 197 aa18.09■□□□□ 0.49
SNED1-208ENST00000466618 TAOK3Q9H2K8 898 aa18.09■□□□□ 0.49
SNED1-208ENST00000466618 MORC2Q9Y6X9 1032 aaPredicted RBP18.09■□□□□ 0.49
SNED1-208ENST00000466618 IRX5P78411 483 aaPredicted RBP18.08■□□□□ 0.49
SNED1-208ENST00000466618 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.08■□□□□ 0.49
SNED1-208ENST00000466618 GPATCH3Q96I76 525 aa18.08■□□□□ 0.49
SNED1-208ENST00000466618 RIMBP2O15034 1052 aa18.08■□□□□ 0.48
SNED1-208ENST00000466618 UBE2HP62256 183 aa18.08■□□□□ 0.48
SNED1-208ENST00000466618 IL17RAQ96F46 866 aa18.08■□□□□ 0.48
SNED1-208ENST00000466618 ESYT1Q9BSJ8 1104 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms