RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 PRMT6Q96LA8 375 aaPredicted RBP14.76□□□□□ -0.05
SHROOM3-202ENST00000466541 VEZTQ9HBM0 779 aa14.76□□□□□ -0.05
SHROOM3-202ENST00000466541 HMG20BQ9P0W2 317 aa14.76□□□□□ -0.05
SHROOM3-202ENST00000466541 PGAP2Q9UHJ9 254 aa14.76□□□□□ -0.05
SHROOM3-202ENST00000466541 AOX1Q06278 1338 aa14.75□□□□□ -0.05
SHROOM3-202ENST00000466541 PASKQ96RG2 1323 aa14.75□□□□□ -0.05
SHROOM3-202ENST00000466541 MYO1BO43795 1136 aa14.75□□□□□ -0.05
SHROOM3-202ENST00000466541 PRDX5P30044 214 aa14.75□□□□□ -0.05
SHROOM3-202ENST00000466541 MCAMP43121 646 aa14.75□□□□□ -0.05
SHROOM3-202ENST00000466541 PRAMEF18Q5VWM3 479 aa14.75□□□□□ -0.05
SHROOM3-202ENST00000466541 LRRCC1Q9C099 1032 aa14.75□□□□□ -0.05
SHROOM3-202ENST00000466541 TRPM7Q96QT4 1865 aa14.75□□□□□ -0.05
SHROOM3-202ENST00000466541 CEP350Q5VT06 3117 aa14.75□□□□□ -0.05
SHROOM3-202ENST00000466541 SPDYE2BA6NHP3 402 aa14.74□□□□□ -0.05
SHROOM3-202ENST00000466541 CELF2O95319 508 aaKnown RBP14.74□□□□□ -0.05
SHROOM3-202ENST00000466541 SPDYE6P0CI01 402 aa14.74□□□□□ -0.05
SHROOM3-202ENST00000466541 ARID4AP29374 1257 aaPredicted RBP14.74□□□□□ -0.05
SHROOM3-202ENST00000466541 MMP14P50281 582 aa14.74□□□□□ -0.05
SHROOM3-202ENST00000466541 DIXDC1Q155Q3 683 aa14.74□□□□□ -0.05
SHROOM3-202ENST00000466541 DZIP1Q86YF9 867 aaKnown RBP14.74□□□□□ -0.05
SHROOM3-202ENST00000466541 TEKT1Q969V4 418 aa14.74□□□□□ -0.05
SHROOM3-202ENST00000466541 DCTPP1Q9H773 170 aa14.74□□□□□ -0.05
SHROOM3-202ENST00000466541 TDRD3Q9H7E2 651 aaKnown RBP14.74□□□□□ -0.05
SHROOM3-202ENST00000466541 SERPINA10Q9UK55 444 aa14.74□□□□□ -0.05
SHROOM3-202ENST00000466541 NDUFB9Q9Y6M9 179 aa14.74□□□□□ -0.05
SHROOM3-202ENST00000466541 MAST3O60307 1309 aa14.73□□□□□ -0.05
SHROOM3-202ENST00000466541 MYH2Q9UKX2 1941 aa14.73□□□□□ -0.05
SHROOM3-202ENST00000466541 TMEM88BA6NKF7 163 aa14.73□□□□□ -0.05
SHROOM3-202ENST00000466541 ERICH6Q7L0X2 663 aa14.73□□□□□ -0.05
SHROOM3-202ENST00000466541 ZGPATQ8N5A5 531 aaKnown RBP14.73□□□□□ -0.05
SHROOM3-202ENST00000466541 RAI14Q9P0K7 980 aa14.73□□□□□ -0.05
SHROOM3-202ENST00000466541 ABT1Q9ULW3 272 aaKnown RBP14.73□□□□□ -0.05
SHROOM3-202ENST00000466541 ECM29Q5VYK3 1845 aa14.73□□□□□ -0.05
SHROOM3-202ENST00000466541 MYO5AQ9Y4I1 1855 aaKnown RBP14.72□□□□□ -0.05
SHROOM3-202ENST00000466541 SPTY2D1Q68D10 685 aaPredicted RBP14.72□□□□□ -0.05
SHROOM3-202ENST00000466541 ZBED3Q96IU2 234 aaPredicted RBP14.72□□□□□ -0.05
SHROOM3-202ENST00000466541 LRP2BPQ9P2M1 347 aa14.72□□□□□ -0.05
SHROOM3-202ENST00000466541 ZBTB47Q9UFB7 747 aaPredicted RBP14.72□□□□□ -0.05
SHROOM3-202ENST00000466541 SUGT1Q9Y2Z0 365 aa14.72□□□□□ -0.05
SHROOM3-202ENST00000466541 AKAP11Q9UKA4 1901 aa14.72□□□□□ -0.05
SHROOM3-202ENST00000466541 TCP10L2B9ZVM9 353 aa14.71□□□□□ -0.05
SHROOM3-202ENST00000466541 ZAP70P43403 619 aa14.71□□□□□ -0.05
SHROOM3-202ENST00000466541 CACNB3P54284 484 aa14.71□□□□□ -0.05
SHROOM3-202ENST00000466541 CST9Q5W186 159 aa14.71□□□□□ -0.05
SHROOM3-202ENST00000466541 PAXIP1Q6ZW49 1069 aaPredicted RBP14.71□□□□□ -0.05
SHROOM3-202ENST00000466541 MTMR14Q8NCE2 650 aa14.71□□□□□ -0.05
SHROOM3-202ENST00000466541 CDCA5Q96FF9 252 aa14.71□□□□□ -0.05
SHROOM3-202ENST00000466541 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.71□□□□□ -0.05
SHROOM3-202ENST00000466541 ZNF70Q9UC06 446 aaPredicted RBP14.71□□□□□ -0.05
SHROOM3-202ENST00000466541 PITPNM2Q9BZ72 1349 aa14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 SALL1Q9NSC2 1324 aa14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 HDLBPQ00341 1268 aaKnown RBP14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 MECOMQ03112 1051 aa14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 GRM1Q13255 1194 aa14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 PRKG1Q13976 671 aa14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 ANKRD45Q5TZF3 282 aa14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 APOBEC3FQ8IUX4 373 aaKnown RBP14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 ZDHHC15Q96MV8 337 aa14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 DNAJC2Q99543 621 aaKnown RBP14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 RWDD1Q9H446 243 aaPredicted RBP14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 CREBZFQ9NS37 354 aa14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 MKRN1Q9UHC7 482 aaKnown RBP14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 DAGLAQ9Y4D2 1042 aa14.7□□□□□ -0.06
SHROOM3-202ENST00000466541 PDS5AQ29RF7 1337 aaKnown RBP14.69□□□□□ -0.06
SHROOM3-202ENST00000466541 AK9Q5TCS8 1911 aa14.69□□□□□ -0.06
SHROOM3-202ENST00000466541 CYP2E1P05181 493 aaPredicted RBP14.69□□□□□ -0.06
SHROOM3-202ENST00000466541 AAMPQ13685 434 aa14.69□□□□□ -0.06
SHROOM3-202ENST00000466541 TTLL12Q14166 644 aaPredicted RBP14.69□□□□□ -0.06
SHROOM3-202ENST00000466541 SPDYE2Q495Y8 402 aa14.69□□□□□ -0.06
SHROOM3-202ENST00000466541 B4GALNT3Q6L9W6 998 aa14.69□□□□□ -0.06
SHROOM3-202ENST00000466541 HHIPL2Q6UWX4 724 aa14.69□□□□□ -0.06
SHROOM3-202ENST00000466541 DEFB129Q9H1M3 183 aa14.69□□□□□ -0.06
SHROOM3-202ENST00000466541 PIH1D3Q9NQM4 214 aaKnown RBP14.69□□□□□ -0.06
SHROOM3-202ENST00000466541 USP40Q9NVE5 1235 aa14.69□□□□□ -0.06
SHROOM3-202ENST00000466541 TMOD2Q9NZR1 351 aa14.69□□□□□ -0.06
SHROOM3-202ENST00000466541 IDH1O75874 414 aaKnown RBP14.68□□□□□ -0.06
SHROOM3-202ENST00000466541 HDAC1Q13547 482 aaPredicted RBP14.68□□□□□ -0.06
SHROOM3-202ENST00000466541 TSHZ3Q63HK5 1081 aa14.68□□□□□ -0.06
SHROOM3-202ENST00000466541 APOBEC3HQ6NTF7 200 aaKnown RBP14.68□□□□□ -0.06
SHROOM3-202ENST00000466541 SLF2Q8IX21 1173 aa14.68□□□□□ -0.06
SHROOM3-202ENST00000466541 BOLA2Q9H3K6 86 aa14.68□□□□□ -0.06
SHROOM3-202ENST00000466541 ANTXR1Q9H6X2 564 aa14.68□□□□□ -0.06
SHROOM3-202ENST00000466541 GOLIM4O00461 696 aa14.67□□□□□ -0.06
SHROOM3-202ENST00000466541 IGHDP01880 384 aa14.67□□□□□ -0.06
SHROOM3-202ENST00000466541 GSTO1P78417 241 aa14.67□□□□□ -0.06
SHROOM3-202ENST00000466541 RASA3Q14644 834 aa14.67□□□□□ -0.06
SHROOM3-202ENST00000466541 NAA16Q6N069 864 aaPredicted RBP14.67□□□□□ -0.06
SHROOM3-202ENST00000466541 C2orf69Q8N8R5 385 aa14.67□□□□□ -0.06
SHROOM3-202ENST00000466541 ZNF512BQ96KM6 892 aaPredicted RBP14.67□□□□□ -0.06
SHROOM3-202ENST00000466541 MRIQ9BWK5 157 aa14.67□□□□□ -0.06
SHROOM3-202ENST00000466541 GBA2Q9HCG7 927 aaPredicted RBP14.67□□□□□ -0.06
SHROOM3-202ENST00000466541 NF2P35240 595 aa14.66□□□□□ -0.06
SHROOM3-202ENST00000466541 BTDP43251 543 aa14.66□□□□□ -0.06
SHROOM3-202ENST00000466541 TCP10Q12799 353 aa14.66□□□□□ -0.06
SHROOM3-202ENST00000466541 CDC42EP5Q6NZY7 148 aa14.66□□□□□ -0.06
SHROOM3-202ENST00000466541 MOB2Q70IA6 237 aa14.66□□□□□ -0.06
SHROOM3-202ENST00000466541 ZNF384Q8TF68 577 aa14.66□□□□□ -0.06
SHROOM3-202ENST00000466541 NSUN4Q96CB9 384 aaKnown RBP14.66□□□□□ -0.06
SHROOM3-202ENST00000466541 GCC1Q96CN9 775 aa14.66□□□□□ -0.06
SHROOM3-202ENST00000466541 EDC3Q96F86 508 aaKnown RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms