RNA–Protein interactions for RNA: ENST00000466141.1

RPUSD3-212, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 996 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-212ENST00000466141 SZT2Q5T011 3432 aa8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 LOC102724159A0A0B4J2E5 919 aa8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 SMARCA5O60264 1052 aaPredicted RBP8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 SASH1O94885 1247 aa8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 SLFN5Q08AF3 891 aa8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 PWP2Q15269 919 aaKnown RBP8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 NOL8Q76FK4 1167 aaKnown RBP8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 TRMT2AQ8IZ69 625 aaKnown RBP8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 PLCD3Q8N3E9 789 aa8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 ISCA1Q9BUE6 129 aa8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 CFHR5Q9BXR6 569 aa8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 PHAXQ9H814 394 aaKnown RBP8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 GGA1Q9UJY5 639 aa8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 RBBP6Q7Z6E9 1792 aaKnown RBP8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 BRCA2P51587 3418 aa8.98□□□□□ -0.97
RPUSD3-212ENST00000466141 KIAA0100Q14667 2235 aaKnown RBP8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 TESPA1A2RU30 521 aaPredicted RBP8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 IGF2BP3O00425 579 aaKnown RBP eCLIP8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 IRS4O14654 1257 aaPredicted RBP8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 SPRYD7Q5W111 196 aa8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 ANKRD13DQ6ZTN6 518 aa8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 G2E3Q7L622 706 aa8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 CD99L2Q8TCZ2 262 aa8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 CDCA7LQ96GN5 454 aa8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 CCDC85AQ96PX6 553 aaPredicted RBP8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 STK31Q9BXU1 1019 aa8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 IGSF5Q9NSI5 407 aa8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 RIPOR2Q9Y4F9 1068 aa8.97□□□□□ -0.97
RPUSD3-212ENST00000466141 ZNF646O15015 1829 aaPredicted RBP8.96□□□□□ -0.97
RPUSD3-212ENST00000466141 CENPFP49454 3210 aa8.96□□□□□ -0.97
RPUSD3-212ENST00000466141 USP17L3A6NCW0 530 aa8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 USP17L4A6NCW7 530 aa8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 WNT10BO00744 389 aa8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 INTS3Q68E01 1043 aaKnown RBP8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 TSHZ1Q6ZSZ6 1077 aa8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 USP17L1Q7RTZ2 530 aa8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 IFNL1Q8IU54 200 aa8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 JARID2Q92833 1246 aaPredicted RBP8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 CLMNQ96JQ2 1002 aa8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 ANGEL1Q9UNK9 670 aaKnown RBP8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 PTPN22Q9Y2R2 807 aa8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 SH3BP1Q9Y3L3 701 aa8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 TRIOBPQ9H2D6 2365 aa8.96□□□□□ -0.98
RPUSD3-212ENST00000466141 A0A0C4DFX4 3053 aa8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 H0YGN5 161 aa8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 NRDCO43847 1150 aa8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 MYCP01106 439 aaPredicted RBP8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 NF2P35240 595 aa8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 TRIM28Q13263 835 aaKnown RBP8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 DACT2Q5SW24 774 aa8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 LDLRAD1Q5T700 205 aa8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 RINLQ6ZS11 566 aa8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 ARMC9Q7Z3E5 817 aa8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 SMAP1Q8IYB5 467 aaPredicted RBP8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 ARMC5Q96C12 935 aa8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 ZBED9Q6R2W3 1325 aa8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 SSC5DA1L4H1 1573 aa8.95□□□□□ -0.98
RPUSD3-212ENST00000466141 PI4KAP2A4QPH2 592 aa8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 DDX58O95786 925 aaKnown RBP8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 ALDH1A1P00352 501 aa8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 CALRP27797 417 aaKnown RBP8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 HNRNPUQ00839 825 aaKnown RBP eCLIP8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 CRHR2Q13324 411 aa8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 UTP14CQ5TAP6 766 aaKnown RBP8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 KSR2Q6VAB6 950 aa8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 RIC3Q7Z5B4 369 aa8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 EGFL6Q8IUX8 553 aa8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 PI4KAP1Q8N8J0 262 aa8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 WNK4Q96J92 1243 aa8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 METTL22Q9BUU2 404 aaPredicted RBP8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 EFCC1Q9HA90 598 aa8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 MAP3K2Q9Y2U5 619 aa8.94□□□□□ -0.98
RPUSD3-212ENST00000466141 MANSC4A6NHS7 340 aaPredicted RBP8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 IGKV5-2P06315 115 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 GJA5P36382 358 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 KCNA1Q09470 495 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 CHRDL2Q6WN34 429 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 PODNQ7Z5L7 613 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 SLC10A4Q96EP9 437 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 OTUD5Q96G74 571 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 ERO1AQ96HE7 468 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 ZNF333Q96JL9 665 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 MYD88Q99836 296 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 RYDENQ9NUL5 291 aaKnown RBP8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 PTCH2Q9Y6C5 1203 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 XDHP47989 1333 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 CEP290O15078 2479 aa8.93□□□□□ -0.98
RPUSD3-212ENST00000466141 UNCXA6NJT0 531 aa8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 CT47B1P0C2W7 299 aaPredicted RBP8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 ATP2B4P23634 1241 aa8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 KLRK1P26718 216 aa8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 FKBP5Q13451 457 aaPredicted RBP8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 TXNRD3Q86VQ6 643 aa8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 KIAA0825Q8IV33 1275 aa8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 OGFOD1Q8N543 542 aa8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 ZBTB38Q8NAP3 1195 aaPredicted RBP8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 CCDC191Q8NCU4 936 aa8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 SSH1Q8WYL5 1049 aa8.92□□□□□ -0.98
RPUSD3-212ENST00000466141 SGSM3Q96HU1 749 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms