RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 CFAP100Q494V2 611 aa22.47■■□□□ 1.19
HOXA9-203ENST00000465941 ABCF2Q9UG63 623 aa22.47■■□□□ 1.19
HOXA9-203ENST00000465941 CYP2E1P05181 493 aaPredicted RBP22.46■■□□□ 1.19
HOXA9-203ENST00000465941 NEFLP07196 543 aa22.46■■□□□ 1.19
HOXA9-203ENST00000465941 ZAP70P43403 619 aa22.46■■□□□ 1.19
HOXA9-203ENST00000465941 NBPF9Q3BBW0 867 aa22.46■■□□□ 1.19
HOXA9-203ENST00000465941 TBC1D9Q6ZT07 1266 aa22.46■■□□□ 1.19
HOXA9-203ENST00000465941 SPDYE2BA6NHP3 402 aa22.45■■□□□ 1.18
HOXA9-203ENST00000465941 IGSF3O75054 1194 aa22.45■■□□□ 1.18
HOXA9-203ENST00000465941 SPDYE6P0CI01 402 aa22.45■■□□□ 1.18
HOXA9-203ENST00000465941 CRKP46108 304 aa22.45■■□□□ 1.18
HOXA9-203ENST00000465941 MAP1SQ66K74 1059 aaPredicted RBP22.45■■□□□ 1.18
HOXA9-203ENST00000465941 HHIPL2Q6UWX4 724 aa22.45■■□□□ 1.18
HOXA9-203ENST00000465941 ERICH6Q7L0X2 663 aa22.45■■□□□ 1.18
HOXA9-203ENST00000465941 CNTROBQ8N137 903 aa22.45■■□□□ 1.18
HOXA9-203ENST00000465941 TEKT1Q969V4 418 aa22.45■■□□□ 1.18
HOXA9-203ENST00000465941 PRMT6Q96LA8 375 aaPredicted RBP22.45■■□□□ 1.18
HOXA9-203ENST00000465941 ECHDC1Q9NTX5 307 aa22.45■■□□□ 1.18
HOXA9-203ENST00000465941 MYH13Q9UKX3 1938 aa22.45■■□□□ 1.18
HOXA9-203ENST00000465941 RBM5P52756 815 aaKnown RBP eCLIP22.44■■□□□ 1.18
HOXA9-203ENST00000465941 C1QTNF8P60827 252 aa22.44■■□□□ 1.18
HOXA9-203ENST00000465941 NUCB1Q02818 461 aa22.44■■□□□ 1.18
HOXA9-203ENST00000465941 GPATCH3Q96I76 525 aa22.44■■□□□ 1.18
HOXA9-203ENST00000465941 ZDHHC15Q96MV8 337 aa22.44■■□□□ 1.18
HOXA9-203ENST00000465941 ASTN2O75129 1339 aaPredicted RBP22.43■■□□□ 1.18
HOXA9-203ENST00000465941 ITGBL1O95965 494 aaPredicted RBP22.43■■□□□ 1.18
HOXA9-203ENST00000465941 B4GALNT3Q6L9W6 998 aa22.43■■□□□ 1.18
HOXA9-203ENST00000465941 DCPSQ96C86 337 aaKnown RBP22.43■■□□□ 1.18
HOXA9-203ENST00000465941 LRP2BPQ9P2M1 347 aa22.43■■□□□ 1.18
HOXA9-203ENST00000465941 PCDHAC2Q9Y5I4 1007 aa22.43■■□□□ 1.18
HOXA9-203ENST00000465941 PITPNM2Q9BZ72 1349 aa22.42■■□□□ 1.18
HOXA9-203ENST00000465941 MECOMQ03112 1051 aa22.42■■□□□ 1.18
HOXA9-203ENST00000465941 ANGEL2Q5VTE6 544 aaKnown RBP22.42■■□□□ 1.18
HOXA9-203ENST00000465941 CDC37L1Q7L3B6 337 aa22.42■■□□□ 1.18
HOXA9-203ENST00000465941 CHD1LQ86WJ1 897 aa22.42■■□□□ 1.18
HOXA9-203ENST00000465941 DZIP1Q86YF9 867 aaKnown RBP22.42■■□□□ 1.18
HOXA9-203ENST00000465941 SLF2Q8IX21 1173 aa22.42■■□□□ 1.18
HOXA9-203ENST00000465941 FAM163AQ96GL9 167 aaPredicted RBP22.42■■□□□ 1.18
HOXA9-203ENST00000465941 HAUS7Q99871 368 aa22.42■■□□□ 1.18
HOXA9-203ENST00000465941 BOLA2Q9H3K6 86 aa22.42■■□□□ 1.18
HOXA9-203ENST00000465941 GGA3Q9NZ52 723 aa22.42■■□□□ 1.18
HOXA9-203ENST00000465941 AKAP11Q9UKA4 1901 aa22.41■■□□□ 1.18
HOXA9-203ENST00000465941 TTC41PQ6P2S7 1318 aa22.41■■□□□ 1.18
HOXA9-203ENST00000465941 SALL3Q9BXA9 1300 aa22.41■■□□□ 1.18
HOXA9-203ENST00000465941 MYO1BO43795 1136 aa22.41■■□□□ 1.18
HOXA9-203ENST00000465941 APOBEC3HQ6NTF7 200 aaKnown RBP22.41■■□□□ 1.18
HOXA9-203ENST00000465941 OTUD7AQ8TE49 926 aaPredicted RBP22.41■■□□□ 1.18
HOXA9-203ENST00000465941 PIH1D3Q9NQM4 214 aaKnown RBP22.41■■□□□ 1.18
HOXA9-203ENST00000465941 RAI14Q9P0K7 980 aa22.41■■□□□ 1.18
HOXA9-203ENST00000465941 NDUFB9Q9Y6M9 179 aa22.41■■□□□ 1.18
HOXA9-203ENST00000465941 TTF1Q15361 905 aaPredicted RBP22.4■■□□□ 1.18
HOXA9-203ENST00000465941 DIXDC1Q155Q3 683 aa22.4■■□□□ 1.18
HOXA9-203ENST00000465941 ZNF384Q8TF68 577 aa22.4■■□□□ 1.18
HOXA9-203ENST00000465941 NSUN4Q96CB9 384 aaKnown RBP22.4■■□□□ 1.18
HOXA9-203ENST00000465941 LNPKQ9C0E8 428 aa22.4■■□□□ 1.18
HOXA9-203ENST00000465941 ANTXR1Q9H6X2 564 aa22.4■■□□□ 1.18
HOXA9-203ENST00000465941 DAGLAQ9Y4D2 1042 aa22.4■■□□□ 1.18
HOXA9-203ENST00000465941 MX1P20591 662 aa22.39■■□□□ 1.17
HOXA9-203ENST00000465941 GSTO1P78417 241 aa22.39■■□□□ 1.17
HOXA9-203ENST00000465941 KRT26Q7Z3Y9 468 aa22.39■■□□□ 1.17
HOXA9-203ENST00000465941 STAP2Q9UGK3 403 aa22.39■■□□□ 1.17
HOXA9-203ENST00000465941 GAKO14976 1311 aa22.38■■□□□ 1.17
HOXA9-203ENST00000465941 PASKQ96RG2 1323 aa22.38■■□□□ 1.17
HOXA9-203ENST00000465941 USP48Q86UV5 1035 aa22.38■■□□□ 1.17
HOXA9-203ENST00000465941 SULF1Q8IWU6 871 aa22.38■■□□□ 1.17
HOXA9-203ENST00000465941 DNAJC2Q99543 621 aaKnown RBP22.38■■□□□ 1.17
HOXA9-203ENST00000465941 GLIS2Q9BZE0 524 aaPredicted RBP22.38■■□□□ 1.17
HOXA9-203ENST00000465941 TDRD3Q9H7E2 651 aaKnown RBP22.38■■□□□ 1.17
HOXA9-203ENST00000465941 PAG1Q9NWQ8 432 aa22.38■■□□□ 1.17
HOXA9-203ENST00000465941 AOX1Q06278 1338 aa22.37■■□□□ 1.17
HOXA9-203ENST00000465941 GOLIM4O00461 696 aa22.37■■□□□ 1.17
HOXA9-203ENST00000465941 ERC2O15083 957 aa22.37■■□□□ 1.17
HOXA9-203ENST00000465941 LDHCP07864 332 aa22.37■■□□□ 1.17
HOXA9-203ENST00000465941 SPDYE2Q495Y8 402 aa22.37■■□□□ 1.17
HOXA9-203ENST00000465941 ERICH6BQ5W0A0 696 aa22.37■■□□□ 1.17
HOXA9-203ENST00000465941 TSHZ3Q63HK5 1081 aa22.37■■□□□ 1.17
HOXA9-203ENST00000465941 TMED8Q6PL24 325 aaPredicted RBP22.37■■□□□ 1.17
HOXA9-203ENST00000465941 APOBEC3FQ8IUX4 373 aaKnown RBP22.37■■□□□ 1.17
HOXA9-203ENST00000465941 PI4K2BQ8TCG2 481 aa22.37■■□□□ 1.17
HOXA9-203ENST00000465941 ZNF70Q9UC06 446 aaPredicted RBP22.37■■□□□ 1.17
HOXA9-203ENST00000465941 IDH1O75874 414 aaKnown RBP22.36■■□□□ 1.17
HOXA9-203ENST00000465941 GLRX3O76003 335 aaKnown RBP22.36■■□□□ 1.17
HOXA9-203ENST00000465941 PDE1AP54750 535 aa22.36■■□□□ 1.17
HOXA9-203ENST00000465941 MAP3K12Q12852 859 aa22.36■■□□□ 1.17
HOXA9-203ENST00000465941 NAA16Q6N069 864 aaPredicted RBP22.36■■□□□ 1.17
HOXA9-203ENST00000465941 MROH7-TTC4A0A0A0MT08 1334 aa22.35■■□□□ 1.17
HOXA9-203ENST00000465941 GPR75-ASB3A0A0A6YYF3 556 aa22.35■■□□□ 1.17
HOXA9-203ENST00000465941 CLRN2A0PK11 232 aa22.35■■□□□ 1.17
HOXA9-203ENST00000465941 EDC3Q96F86 508 aaKnown RBP22.35■■□□□ 1.17
HOXA9-203ENST00000465941 ADM5C9JUS6 153 aa22.34■■□□□ 1.17
HOXA9-203ENST00000465941 TRAF5O00463 557 aa22.34■■□□□ 1.17
HOXA9-203ENST00000465941 FKBP1CQ5VVH2 108 aa22.33■■□□□ 1.17
HOXA9-203ENST00000465941 CDC42EP5Q6NZY7 148 aa22.33■■□□□ 1.17
HOXA9-203ENST00000465941 DEFB129Q9H1M3 183 aa22.33■■□□□ 1.17
HOXA9-203ENST00000465941 OSBPL3Q9H4L5 887 aa22.33■■□□□ 1.17
HOXA9-203ENST00000465941 VEZTQ9HBM0 779 aa22.33■■□□□ 1.17
HOXA9-203ENST00000465941 SCAF8Q9UPN6 1271 aaKnown RBP22.33■■□□□ 1.17
HOXA9-203ENST00000465941 BTDP43251 543 aa22.32■■□□□ 1.16
HOXA9-203ENST00000465941 TNFAIP1Q13829 316 aa22.32■■□□□ 1.16
HOXA9-203ENST00000465941 CENPQQ7L2Z9 268 aaPredicted RBP22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms