RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 CEP57L1Q8IYX8 460 aa8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 ZNF511Q8NB15 262 aa8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 C16orf45Q96MC5 204 aaPredicted RBP8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 ZNF396Q96N95 335 aaPredicted RBP8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 LLPHQ9BRT6 129 aaKnown RBP8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 CWC15Q9P013 229 aaKnown RBP8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 GMPR2Q9P2T1 348 aaKnown RBP8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 LRRFIP2Q9Y608 721 aaKnown RBP8.41□□□□□ -1.06
CLSTN1-204ENST00000464286 OVOS2A0A0J9YW53 1432 aa8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 OVOS2Q6IE36 1432 aa8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 GOLGA6L9A6NEM1 432 aa8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 HMGB1P09429 215 aaKnown RBP8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 IFIT2P09913 472 aaKnown RBP8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 DCTN1Q14203 1278 aa8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 FOXD4L6Q3SYB3 417 aaPredicted RBP8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 FOXD4L3Q6VB84 417 aaPredicted RBP8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 MCM10Q7L590 875 aa8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 TXLNBQ8N3L3 684 aa8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 RGS22Q8NE09 1264 aa8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 PI4K2BQ8TCG2 481 aa8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 GPBP1L1Q9HC44 474 aaPredicted RBP8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 SNRKQ9NRH2 765 aa8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 POLR3EQ9NVU0 708 aa8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 MAP10Q9P2G4 905 aa8.4□□□□□ -1.06
CLSTN1-204ENST00000464286 TOPAZ1Q8N9V7 1692 aa8.4□□□□□ -1.07
CLSTN1-204ENST00000464286 DIP2AQ14689 1571 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 CEP170BQ9Y4F5 1589 aaPredicted RBP8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 PLEKHG3A1L390 1219 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 GNAT3A8MTJ3 354 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 H3BQV1 296 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 KINO60870 393 aaKnown RBP8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 SKILP12757 684 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 MTX1Q13505 466 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 TSGA10IPQ3SY00 556 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 JAKMIP3Q5VZ66 844 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 NAA16Q6N069 864 aaPredicted RBP8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 CTR9Q6PD62 1173 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 WAPLQ7Z5K2 1190 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 LRRC8AQ8IWT6 810 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 C17orf53Q8N3J3 647 aaPredicted RBP8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 LEO1Q8WVC0 666 aaPredicted RBP8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 NOL10Q9BSC4 688 aaKnown RBP8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 KDM4CQ9H3R0 1056 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 DACT1Q9NYF0 836 aa8.39□□□□□ -1.07
CLSTN1-204ENST00000464286 PTPRUQ92729 1446 aa8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 PNMA6EA0A0J9YXQ4 647 aa8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 SRGAP3O43295 1099 aa8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 CBFA2T2O43439 604 aa8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 ALDH1L1O75891 902 aa8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 SLFN14P0C7P3 912 aa8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 RRS1Q15050 365 aaKnown RBP8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 TAF7Q15545 349 aaPredicted RBP8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 PRPF40BQ6NWY9 871 aaKnown RBP8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 CWC27Q6UX04 472 aaKnown RBP8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 PPP1R42Q7Z4L9 355 aa8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 TTC6Q86TZ1 520 aa8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 LUZP1Q86V48 1076 aa8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 CCAR2Q8N163 923 aaKnown RBP8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 BPIFA3Q9BQP9 254 aa8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 OSBPL5Q9H0X9 879 aaPredicted RBP8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 ATP13A2Q9NQ11 1180 aa8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 FAM53CQ9NYF3 392 aa8.38□□□□□ -1.07
CLSTN1-204ENST00000464286 MYH15Q9Y2K3 1946 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 PHLPP2Q6ZVD8 1323 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 TSPOAP1O95153 1857 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 F6X3S4 739 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 ZSCAN12O43309 604 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 VARSP26640 1264 aaKnown RBP8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 SNW1Q13573 536 aaKnown RBP8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 NECTIN1Q15223 517 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 KRT24Q2M2I5 525 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 CREB3L3Q68CJ9 461 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 TMCO3Q6UWJ1 677 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 FCHSD1Q86WN1 690 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 TSC1Q92574 1164 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 ZNF592Q92610 1267 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 CHAMP1Q96JM3 812 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 FAM117AQ9C073 453 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 USP44Q9H0E7 712 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 L2HGDHQ9H9P8 463 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 USP6P35125 1406 aa8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 RIMS1Q86UR5 1692 aaKnown RBP8.37□□□□□ -1.07
CLSTN1-204ENST00000464286 IGSF1Q8N6C5 1336 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 SLIT1O75093 1534 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 A0A0U1RQG5 324 aaPredicted RBP8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 CCDC69A6NI79 296 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 TUBBP07437 444 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 SFPQP23246 707 aaKnown RBP eCLIP8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 RPS6KB1P23443 525 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 NOM1Q5C9Z4 860 aaKnown RBP8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 HDGFL1Q5TGJ6 251 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 G2E3Q7L622 706 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 MPNDQ8N594 471 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 GOLGA6L1Q8N7Z2 621 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 MNS1Q8NEH6 495 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 CACTINQ8WUQ7 758 aaKnown RBP8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 UBXN4Q92575 508 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 MAP4K1Q92918 833 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 DDX11Q96FC9 970 aa8.36□□□□□ -1.07
CLSTN1-204ENST00000464286 IL1RAPL2Q9NP60 686 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms