RNA–Protein interactions for RNA: ENST00000464263.1

RAB11FIP3-208, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 329 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-208ENST00000464263 GGA3Q9NZ52 723 aa18.91■□□□□ 0.62
RAB11FIP3-208ENST00000464263 TRAF5O00463 557 aa18.9■□□□□ 0.62
RAB11FIP3-208ENST00000464263 CRKP46108 304 aa18.9■□□□□ 0.62
RAB11FIP3-208ENST00000464263 TTC39AQ5SRH9 613 aa18.9■□□□□ 0.62
RAB11FIP3-208ENST00000464263 PI16Q6UXB8 463 aa18.9■□□□□ 0.62
RAB11FIP3-208ENST00000464263 LRRCC1Q9C099 1032 aa18.9■□□□□ 0.62
RAB11FIP3-208ENST00000464263 PITPNM2Q9BZ72 1349 aa18.9■□□□□ 0.62
RAB11FIP3-208ENST00000464263 MYO5AQ9Y4I1 1855 aaKnown RBP18.89■□□□□ 0.61
RAB11FIP3-208ENST00000464263 SPDYE2BA6NHP3 402 aa18.89■□□□□ 0.61
RAB11FIP3-208ENST00000464263 LDHBP07195 334 aaKnown RBP18.89■□□□□ 0.61
RAB11FIP3-208ENST00000464263 SPDYE6P0CI01 402 aa18.89■□□□□ 0.61
RAB11FIP3-208ENST00000464263 PRDX5P30044 214 aa18.89■□□□□ 0.61
RAB11FIP3-208ENST00000464263 HDAC1Q13547 482 aaPredicted RBP18.89■□□□□ 0.61
RAB11FIP3-208ENST00000464263 DLK2Q6UY11 383 aa18.89■□□□□ 0.61
RAB11FIP3-208ENST00000464263 KRT26Q7Z3Y9 468 aa18.89■□□□□ 0.61
RAB11FIP3-208ENST00000464263 ZGPATQ8N5A5 531 aaKnown RBP18.89■□□□□ 0.61
RAB11FIP3-208ENST00000464263 AOX1Q06278 1338 aa18.89■□□□□ 0.61
RAB11FIP3-208ENST00000464263 MYH2Q9UKX2 1941 aa18.88■□□□□ 0.61
RAB11FIP3-208ENST00000464263 SMARCA5O60264 1052 aaPredicted RBP18.88■□□□□ 0.61
RAB11FIP3-208ENST00000464263 RBM5P52756 815 aaKnown RBP eCLIP18.88■□□□□ 0.61
RAB11FIP3-208ENST00000464263 IRX6P78412 446 aaPredicted RBP18.88■□□□□ 0.61
RAB11FIP3-208ENST00000464263 MAST3O60307 1309 aa18.88■□□□□ 0.61
RAB11FIP3-208ENST00000464263 ADM5C9JUS6 153 aa18.87■□□□□ 0.61
RAB11FIP3-208ENST00000464263 IFIT2P09913 472 aaKnown RBP18.87■□□□□ 0.61
RAB11FIP3-208ENST00000464263 CST9Q5W186 159 aa18.87■□□□□ 0.61
RAB11FIP3-208ENST00000464263 HHIPL2Q6UWX4 724 aa18.87■□□□□ 0.61
RAB11FIP3-208ENST00000464263 TBC1D9Q6ZT07 1266 aa18.87■□□□□ 0.61
RAB11FIP3-208ENST00000464263 SULF1Q8IWU6 871 aa18.87■□□□□ 0.61
RAB11FIP3-208ENST00000464263 TEKT1Q969V4 418 aa18.87■□□□□ 0.61
RAB11FIP3-208ENST00000464263 ZDHHC15Q96MV8 337 aa18.87■□□□□ 0.61
RAB11FIP3-208ENST00000464263 SNRKQ9NRH2 765 aa18.87■□□□□ 0.61
RAB11FIP3-208ENST00000464263 ABCF2Q9UG63 623 aa18.87■□□□□ 0.61
RAB11FIP3-208ENST00000464263 HTRA3P83110 453 aa18.86■□□□□ 0.61
RAB11FIP3-208ENST00000464263 SPTY2D1Q68D10 685 aaPredicted RBP18.86■□□□□ 0.61
RAB11FIP3-208ENST00000464263 SCAF8Q9UPN6 1271 aaKnown RBP18.86■□□□□ 0.61
RAB11FIP3-208ENST00000464263 TMEM88BA6NKF7 163 aa18.85■□□□□ 0.61
RAB11FIP3-208ENST00000464263 MYO1BO43795 1136 aa18.85■□□□□ 0.61
RAB11FIP3-208ENST00000464263 CYP2E1P05181 493 aaPredicted RBP18.85■□□□□ 0.61
RAB11FIP3-208ENST00000464263 ZAP70P43403 619 aa18.85■□□□□ 0.61
RAB11FIP3-208ENST00000464263 APOBEC3HQ6NTF7 200 aaKnown RBP18.85■□□□□ 0.61
RAB11FIP3-208ENST00000464263 BCL11AQ9H165 835 aa18.85■□□□□ 0.61
RAB11FIP3-208ENST00000464263 TDRD3Q9H7E2 651 aaKnown RBP18.85■□□□□ 0.61
RAB11FIP3-208ENST00000464263 CLRN2A0PK11 232 aa18.84■□□□□ 0.61
RAB11FIP3-208ENST00000464263 DIXDC1Q155Q3 683 aa18.84■□□□□ 0.61
RAB11FIP3-208ENST00000464263 SPDYE2Q495Y8 402 aa18.84■□□□□ 0.61
RAB11FIP3-208ENST00000464263 ERICH6Q7L0X2 663 aa18.84■□□□□ 0.61
RAB11FIP3-208ENST00000464263 APOBEC3FQ8IUX4 373 aaKnown RBP18.84■□□□□ 0.61
RAB11FIP3-208ENST00000464263 ZNF384Q8TF68 577 aa18.84■□□□□ 0.61
RAB11FIP3-208ENST00000464263 FAM163AQ96GL9 167 aaPredicted RBP18.84■□□□□ 0.61
RAB11FIP3-208ENST00000464263 CREBZFQ9NS37 354 aa18.84■□□□□ 0.61
RAB11FIP3-208ENST00000464263 ZNF70Q9UC06 446 aaPredicted RBP18.84■□□□□ 0.61
RAB11FIP3-208ENST00000464263 IGHDP01880 384 aa18.83■□□□□ 0.6
RAB11FIP3-208ENST00000464263 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.83■□□□□ 0.6
RAB11FIP3-208ENST00000464263 GCC1Q96CN9 775 aa18.83■□□□□ 0.6
RAB11FIP3-208ENST00000464263 RWDD1Q9H446 243 aaPredicted RBP18.83■□□□□ 0.6
RAB11FIP3-208ENST00000464263 DAGLAQ9Y4D2 1042 aa18.83■□□□□ 0.6
RAB11FIP3-208ENST00000464263 CELF2O95319 508 aaKnown RBP18.82■□□□□ 0.6
RAB11FIP3-208ENST00000464263 MECOMQ03112 1051 aa18.82■□□□□ 0.6
RAB11FIP3-208ENST00000464263 DZIP1Q86YF9 867 aaKnown RBP18.82■□□□□ 0.6
RAB11FIP3-208ENST00000464263 DNAJC5GQ8N7S2 189 aa18.82■□□□□ 0.6
RAB11FIP3-208ENST00000464263 NSUN4Q96CB9 384 aaKnown RBP18.82■□□□□ 0.6
RAB11FIP3-208ENST00000464263 CDCA5Q96FF9 252 aa18.82■□□□□ 0.6
RAB11FIP3-208ENST00000464263 PIH1D3Q9NQM4 214 aaKnown RBP18.82■□□□□ 0.6
RAB11FIP3-208ENST00000464263 NDUFB9Q9Y6M9 179 aa18.82■□□□□ 0.6
RAB11FIP3-208ENST00000464263 GAKO14976 1311 aa18.81■□□□□ 0.6
RAB11FIP3-208ENST00000464263 ATP5JP18859 108 aa18.81■□□□□ 0.6
RAB11FIP3-208ENST00000464263 PRAMEF18Q5VWM3 479 aa18.81■□□□□ 0.6
RAB11FIP3-208ENST00000464263 DEFB129Q9H1M3 183 aa18.81■□□□□ 0.6
RAB11FIP3-208ENST00000464263 LRP2BPQ9P2M1 347 aa18.81■□□□□ 0.6
RAB11FIP3-208ENST00000464263 DOCK2Q92608 1830 aa18.8■□□□□ 0.6
RAB11FIP3-208ENST00000464263 ANKRD45Q5TZF3 282 aa18.8■□□□□ 0.6
RAB11FIP3-208ENST00000464263 SLF2Q8IX21 1173 aa18.8■□□□□ 0.6
RAB11FIP3-208ENST00000464263 SMC5Q8IY18 1101 aa18.8■□□□□ 0.6
RAB11FIP3-208ENST00000464263 ANTXR1Q9H6X2 564 aa18.8■□□□□ 0.6
RAB11FIP3-208ENST00000464263 ZNF408Q9H9D4 720 aa18.8■□□□□ 0.6
RAB11FIP3-208ENST00000464263 VEZTQ9HBM0 779 aa18.8■□□□□ 0.6
RAB11FIP3-208ENST00000464263 RAI14Q9P0K7 980 aa18.8■□□□□ 0.6
RAB11FIP3-208ENST00000464263 IGSF3O75054 1194 aa18.79■□□□□ 0.6
RAB11FIP3-208ENST00000464263 CDC42EP5Q6NZY7 148 aa18.79■□□□□ 0.6
RAB11FIP3-208ENST00000464263 PPP2R3BQ9Y5P8 575 aa18.79■□□□□ 0.6
RAB11FIP3-208ENST00000464263 CEP350Q5VT06 3117 aa18.78■□□□□ 0.6
RAB11FIP3-208ENST00000464263 GPR75-ASB3A0A0A6YYF3 556 aa18.78■□□□□ 0.6
RAB11FIP3-208ENST00000464263 LDHCP07864 332 aa18.78■□□□□ 0.6
RAB11FIP3-208ENST00000464263 CACNB3P54284 484 aa18.78■□□□□ 0.6
RAB11FIP3-208ENST00000464263 GSTO1P78417 241 aa18.78■□□□□ 0.6
RAB11FIP3-208ENST00000464263 RASA3Q14644 834 aa18.78■□□□□ 0.6
RAB11FIP3-208ENST00000464263 FKBP1CQ5VVH2 108 aa18.78■□□□□ 0.6
RAB11FIP3-208ENST00000464263 BOLA2Q9H3K6 86 aa18.78■□□□□ 0.6
RAB11FIP3-208ENST00000464263 ECHDC1Q9NTX5 307 aa18.78■□□□□ 0.6
RAB11FIP3-208ENST00000464263 TLL2Q9Y6L7 1015 aa18.78■□□□□ 0.6
RAB11FIP3-208ENST00000464263 MROH7-TTC4A0A0A0MT08 1334 aa18.77■□□□□ 0.6
RAB11FIP3-208ENST00000464263 TCP10L2B9ZVM9 353 aa18.77■□□□□ 0.6
RAB11FIP3-208ENST00000464263 TNFAIP1Q13829 316 aa18.77■□□□□ 0.6
RAB11FIP3-208ENST00000464263 HAUS7Q99871 368 aa18.77■□□□□ 0.6
RAB11FIP3-208ENST00000464263 GBA2Q9HCG7 927 aaPredicted RBP18.77■□□□□ 0.6
RAB11FIP3-208ENST00000464263 USP40Q9NVE5 1235 aa18.77■□□□□ 0.6
RAB11FIP3-208ENST00000464263 MAST2Q6P0Q8 1798 aa18.77■□□□□ 0.6
RAB11FIP3-208ENST00000464263 CNTNAP1P78357 1384 aa18.77■□□□□ 0.6
RAB11FIP3-208ENST00000464263 TTF1Q15361 905 aaPredicted RBP18.76■□□□□ 0.59
RAB11FIP3-208ENST00000464263 NAA16Q6N069 864 aaPredicted RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms