RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 USP17L4A6NCW7 530 aa25.73■■□□□ 1.71
CD58-204ENST00000464088 USP17L1Q7RTZ2 530 aa25.73■■□□□ 1.71
CD58-204ENST00000464088 LPIN2Q92539 896 aa25.72■■□□□ 1.71
CD58-204ENST00000464088 GCC1Q96CN9 775 aa25.72■■□□□ 1.71
CD58-204ENST00000464088 EXOC6BQ9Y2D4 811 aa25.72■■□□□ 1.71
CD58-204ENST00000464088 IRX6P78412 446 aaPredicted RBP25.71■■□□□ 1.71
CD58-204ENST00000464088 ATP2B3Q16720 1220 aa25.71■■□□□ 1.71
CD58-204ENST00000464088 FAM84BQ96KN1 310 aaPredicted RBP25.71■■□□□ 1.71
CD58-204ENST00000464088 CD209Q9NNX6 404 aa25.7■■□□□ 1.7
CD58-204ENST00000464088 SCAF8Q9UPN6 1271 aaKnown RBP25.7■■□□□ 1.7
CD58-204ENST00000464088 IFIT1P09914 478 aaKnown RBP25.69■■□□□ 1.7
CD58-204ENST00000464088 SLC5A1P13866 664 aa25.69■■□□□ 1.7
CD58-204ENST00000464088 GYG1P46976 350 aa25.69■■□□□ 1.7
CD58-204ENST00000464088 SREBF2Q12772 1141 aa25.69■■□□□ 1.7
CD58-204ENST00000464088 OS9Q13438 667 aaPredicted RBP25.69■■□□□ 1.7
CD58-204ENST00000464088 NBPF9Q3BBW0 867 aa25.69■■□□□ 1.7
CD58-204ENST00000464088 PRAMEF18Q5VWM3 479 aa25.69■■□□□ 1.7
CD58-204ENST00000464088 FBXO33Q7Z6M2 555 aa25.69■■□□□ 1.7
CD58-204ENST00000464088 FKTNO75072 461 aa25.68■■□□□ 1.7
CD58-204ENST00000464088 CENPBP07199 599 aaPredicted RBP25.68■■□□□ 1.7
CD58-204ENST00000464088 IL1R1P14778 569 aa25.68■■□□□ 1.7
CD58-204ENST00000464088 HSP90AB4PQ58FF6 505 aa25.68■■□□□ 1.7
CD58-204ENST00000464088 ZNF804AQ7Z570 1209 aa25.68■■□□□ 1.7
CD58-204ENST00000464088 GPR108Q9NPR9 543 aa25.68■■□□□ 1.7
CD58-204ENST00000464088 AKAP2Q9Y2D5 859 aa25.68■■□□□ 1.7
CD58-204ENST00000464088 A0A1B0GUL7 405 aa25.67■■□□□ 1.7
CD58-204ENST00000464088 HIBADHP31937 336 aaKnown RBP25.67■■□□□ 1.7
CD58-204ENST00000464088 HTTP42858 3142 aa25.66■■□□□ 1.7
CD58-204ENST00000464088 WNT10BO00744 389 aa25.66■■□□□ 1.7
CD58-204ENST00000464088 NF2P35240 595 aa25.66■■□□□ 1.7
CD58-204ENST00000464088 TIMM10P62072 90 aa25.66■■□□□ 1.7
CD58-204ENST00000464088 TTLL12Q14166 644 aaPredicted RBP25.66■■□□□ 1.7
CD58-204ENST00000464088 ERC1Q8IUD2 1116 aa25.66■■□□□ 1.7
CD58-204ENST00000464088 TDRD7Q8NHU6 1098 aaKnown RBP25.66■■□□□ 1.7
CD58-204ENST00000464088 MKI67P46013 3256 aaKnown RBP25.66■■□□□ 1.7
CD58-204ENST00000464088 ADORA1P30542 326 aa25.65■■□□□ 1.7
CD58-204ENST00000464088 MMP14P50281 582 aa25.65■■□□□ 1.7
CD58-204ENST00000464088 BCAMP50895 628 aa25.65■■□□□ 1.7
CD58-204ENST00000464088 TNNI3KQ59H18 835 aa25.65■■□□□ 1.7
CD58-204ENST00000464088 DACT2Q5SW24 774 aa25.65■■□□□ 1.7
CD58-204ENST00000464088 RHPN1Q8TCX5 695 aa25.65■■□□□ 1.7
CD58-204ENST00000464088 R3HDMLQ9H3Y0 253 aa25.65■■□□□ 1.7
CD58-204ENST00000464088 DCTPP1Q9H773 170 aa25.65■■□□□ 1.7
CD58-204ENST00000464088 FPGT-TNNI3KV9GXZ4 949 aa25.65■■□□□ 1.7
CD58-204ENST00000464088 LAMB1P07942 1786 aa25.64■■□□□ 1.7
CD58-204ENST00000464088 RAB11FIP3O75154 756 aa25.64■■□□□ 1.7
CD58-204ENST00000464088 CAVIN4Q5BKX8 364 aa25.64■■□□□ 1.7
CD58-204ENST00000464088 OGFOD1Q8N543 542 aa25.64■■□□□ 1.7
CD58-204ENST00000464088 MYO3BQ8WXR4 1341 aa25.63■■□□□ 1.69
CD58-204ENST00000464088 HDAC1Q13547 482 aaPredicted RBP25.63■■□□□ 1.69
CD58-204ENST00000464088 XAGE2Q96GT9 111 aa25.63■■□□□ 1.69
CD58-204ENST00000464088 RBBP6Q7Z6E9 1792 aaKnown RBP25.63■■□□□ 1.69
CD58-204ENST00000464088 ZBTB22O15209 634 aa25.62■■□□□ 1.69
CD58-204ENST00000464088 ALDH1A1P00352 501 aa25.62■■□□□ 1.69
CD58-204ENST00000464088 MKRN3Q13064 507 aaKnown RBP25.62■■□□□ 1.69
CD58-204ENST00000464088 LDLRAD1Q5T700 205 aa25.62■■□□□ 1.69
CD58-204ENST00000464088 STRIP1Q5VSL9 837 aa25.62■■□□□ 1.69
CD58-204ENST00000464088 ARMC9Q7Z3E5 817 aa25.62■■□□□ 1.69
CD58-204ENST00000464088 KIF1BPQ96EK5 621 aa25.62■■□□□ 1.69
CD58-204ENST00000464088 MYH13Q9UKX3 1938 aa25.62■■□□□ 1.69
CD58-204ENST00000464088 SPRYD7Q5W111 196 aa25.61■■□□□ 1.69
CD58-204ENST00000464088 EAF2Q96CJ1 260 aaPredicted RBP25.61■■□□□ 1.69
CD58-204ENST00000464088 FAM205AQ6ZU69 1335 aa25.61■■□□□ 1.69
CD58-204ENST00000464088 PHKA1P46020 1223 aa25.6■■□□□ 1.69
CD58-204ENST00000464088 GTF2IP78347 998 aa25.6■■□□□ 1.69
CD58-204ENST00000464088 HABP4Q5JVS0 413 aaKnown RBP25.6■■□□□ 1.69
CD58-204ENST00000464088 CCDC102BQ68D86 513 aa25.6■■□□□ 1.69
CD58-204ENST00000464088 TTLL5Q6EMB2 1281 aa25.6■■□□□ 1.69
CD58-204ENST00000464088 VPS37DQ86XT2 251 aa25.6■■□□□ 1.69
CD58-204ENST00000464088 NEUROD6Q96NK8 337 aa25.6■■□□□ 1.69
CD58-204ENST00000464088 MXD3Q9BW11 206 aa25.6■■□□□ 1.69
CD58-204ENST00000464088 APBB1O00213 710 aa25.59■■□□□ 1.69
CD58-204ENST00000464088 IL1RAPL2Q9NP60 686 aa25.59■■□□□ 1.69
CD58-204ENST00000464088 COL1A1P02452 1464 aaPredicted RBP25.59■■□□□ 1.69
CD58-204ENST00000464088 INHBEP58166 350 aa25.58■■□□□ 1.69
CD58-204ENST00000464088 APOBEC3FQ8IUX4 373 aaKnown RBP25.58■■□□□ 1.69
CD58-204ENST00000464088 ZBED3Q96IU2 234 aaPredicted RBP25.58■■□□□ 1.69
CD58-204ENST00000464088 DBNDD2Q9BQY9 259 aa25.58■■□□□ 1.69
CD58-204ENST00000464088 DBNLQ9UJU6 430 aaKnown RBP25.58■■□□□ 1.69
CD58-204ENST00000464088 IQSEC3Q9UPP2 1182 aaPredicted RBP25.58■■□□□ 1.69
CD58-204ENST00000464088 CENPFP49454 3210 aa25.58■■□□□ 1.69
CD58-204ENST00000464088 MANSC4A6NHS7 340 aaPredicted RBP25.56■■□□□ 1.68
CD58-204ENST00000464088 FKBP1AP62942 108 aaKnown RBP25.56■■□□□ 1.68
CD58-204ENST00000464088 CERS5Q8N5B7 392 aa25.56■■□□□ 1.68
CD58-204ENST00000464088 FBXW7Q969H0 707 aa25.56■■□□□ 1.68
CD58-204ENST00000464088 LRRCC1Q9C099 1032 aa25.56■■□□□ 1.68
CD58-204ENST00000464088 CCDC8Q9H0W5 538 aaPredicted RBP25.56■■□□□ 1.68
CD58-204ENST00000464088 TLR7Q9NYK1 1049 aaKnown RBP25.56■■□□□ 1.68
CD58-204ENST00000464088 MAP3K11Q16584 847 aa25.55■■□□□ 1.68
CD58-204ENST00000464088 OTOP1Q7RTM1 612 aa25.55■■□□□ 1.68
CD58-204ENST00000464088 AACSQ86V21 672 aa25.55■■□□□ 1.68
CD58-204ENST00000464088 IFNL1Q8IU54 200 aa25.55■■□□□ 1.68
CD58-204ENST00000464088 CLASRPQ8N2M8 674 aaKnown RBP25.55■■□□□ 1.68
CD58-204ENST00000464088 JAG2Q9Y219 1238 aa25.55■■□□□ 1.68
CD58-204ENST00000464088 TRIM17Q9Y577 477 aa25.55■■□□□ 1.68
CD58-204ENST00000464088 POTEFA5A3E0 1075 aa25.54■■□□□ 1.68
CD58-204ENST00000464088 SEMA3EO15041 775 aa25.54■■□□□ 1.68
CD58-204ENST00000464088 IGHDP01880 384 aa25.54■■□□□ 1.68
CD58-204ENST00000464088 PRKG1Q13976 671 aa25.54■■□□□ 1.68
CD58-204ENST00000464088 GNL3LQ9NVN8 582 aaKnown RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms