RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 AGBL3Q8NEM8 1001 aa11.85□□□□□ -0.51
PTPRD-207ENST00000463477 CD209Q9NNX6 404 aa11.85□□□□□ -0.51
PTPRD-207ENST00000463477 H7C1D1 291 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 SASH1O94885 1247 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 HSPA6P17066 643 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 EAPPQ56P03 285 aaPredicted RBP11.84□□□□□ -0.51
PTPRD-207ENST00000463477 STRIP1Q5VSL9 837 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 RSBN1LQ6PCB5 846 aaPredicted RBP11.84□□□□□ -0.51
PTPRD-207ENST00000463477 KIAA1211Q6ZU35 1233 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 FAM43AQ8N2R8 423 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 ZGPATQ8N5A5 531 aaKnown RBP11.84□□□□□ -0.51
PTPRD-207ENST00000463477 TM6SF1Q9BZW5 370 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 IL25Q9H293 177 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 ZDHHC9Q9Y397 364 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 SPEF2Q9C093 1822 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 RFX7Q2KHR2 1363 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 BRD1O95696 1058 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 IL1R1P14778 569 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 IL15P40933 162 aaPredicted RBP11.84□□□□□ -0.51
PTPRD-207ENST00000463477 TTLL5Q6EMB2 1281 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 ZNF804AQ7Z570 1209 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 FAM84BQ96KN1 310 aaPredicted RBP11.84□□□□□ -0.51
PTPRD-207ENST00000463477 GMLQ99445 158 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 GZF1Q9H116 711 aaPredicted RBP11.84□□□□□ -0.51
PTPRD-207ENST00000463477 GRPEL1Q9HAV7 217 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 DIAPH3Q9NSV4 1193 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 LMBRD1Q9NUN5 540 aa11.84□□□□□ -0.51
PTPRD-207ENST00000463477 TCHHQ07283 1943 aa11.83□□□□□ -0.52
PTPRD-207ENST00000463477 FGFR2P21802 821 aa11.83□□□□□ -0.52
PTPRD-207ENST00000463477 MMP14P50281 582 aa11.83□□□□□ -0.52
PTPRD-207ENST00000463477 DACT2Q5SW24 774 aa11.83□□□□□ -0.52
PTPRD-207ENST00000463477 TICAM2Q86XR7 235 aa11.83□□□□□ -0.52
PTPRD-207ENST00000463477 MICALL2Q8IY33 904 aa11.83□□□□□ -0.52
PTPRD-207ENST00000463477 ZC3H15Q8WU90 426 aaKnown RBP11.83□□□□□ -0.52
PTPRD-207ENST00000463477 TTC14Q96N46 770 aa11.83□□□□□ -0.52
PTPRD-207ENST00000463477 CEP126Q9P2H0 1117 aa11.83□□□□□ -0.52
PTPRD-207ENST00000463477 PGAP2Q9UHJ9 254 aa11.83□□□□□ -0.52
PTPRD-207ENST00000463477 PA2G4Q9UQ80 394 aaKnown RBP11.83□□□□□ -0.52
PTPRD-207ENST00000463477 CLEC11AQ9Y240 323 aa11.83□□□□□ -0.52
PTPRD-207ENST00000463477 SNX14Q9Y5W7 946 aa11.83□□□□□ -0.52
PTPRD-207ENST00000463477 ZNF609O15014 1411 aa11.82□□□□□ -0.52
PTPRD-207ENST00000463477 HIBADHP31937 336 aaKnown RBP11.82□□□□□ -0.52
PTPRD-207ENST00000463477 ZNF445P59923 1031 aa11.82□□□□□ -0.52
PTPRD-207ENST00000463477 FBXO33Q7Z6M2 555 aa11.82□□□□□ -0.52
PTPRD-207ENST00000463477 AACSQ86V21 672 aa11.82□□□□□ -0.52
PTPRD-207ENST00000463477 TDRD7Q8NHU6 1098 aaKnown RBP11.82□□□□□ -0.52
PTPRD-207ENST00000463477 SIL1Q9H173 461 aa11.82□□□□□ -0.52
PTPRD-207ENST00000463477 DDX49Q9Y6V7 483 aaKnown RBP11.82□□□□□ -0.52
PTPRD-207ENST00000463477 SCN9AQ15858 1988 aa11.82□□□□□ -0.52
PTPRD-207ENST00000463477 MYO3BQ8WXR4 1341 aa11.81□□□□□ -0.52
PTPRD-207ENST00000463477 ITGBL1O95965 494 aaPredicted RBP11.81□□□□□ -0.52
PTPRD-207ENST00000463477 HIRAP54198 1017 aaPredicted RBP11.81□□□□□ -0.52
PTPRD-207ENST00000463477 ZNF280AP59817 542 aaPredicted RBP11.81□□□□□ -0.52
PTPRD-207ENST00000463477 GTF2IP78347 998 aa11.81□□□□□ -0.52
PTPRD-207ENST00000463477 PKP1Q13835 747 aa11.81□□□□□ -0.52
PTPRD-207ENST00000463477 PUM3Q15397 648 aaKnown RBP11.81□□□□□ -0.52
PTPRD-207ENST00000463477 CAVIN4Q5BKX8 364 aa11.81□□□□□ -0.52
PTPRD-207ENST00000463477 LPIN2Q92539 896 aa11.81□□□□□ -0.52
PTPRD-207ENST00000463477 EAF2Q96CJ1 260 aaPredicted RBP11.81□□□□□ -0.52
PTPRD-207ENST00000463477 SHTN1A0MZ66 631 aa11.81□□□□□ -0.52
PTPRD-207ENST00000463477 MAP4K4O95819 1239 aaPredicted RBP11.81□□□□□ -0.52
PTPRD-207ENST00000463477 IFIT1P09914 478 aaKnown RBP11.81□□□□□ -0.52
PTPRD-207ENST00000463477 USP17L8P0C7I0 530 aa11.81□□□□□ -0.52
PTPRD-207ENST00000463477 GYG1P46976 350 aa11.81□□□□□ -0.52
PTPRD-207ENST00000463477 APLP1P51693 650 aa11.81□□□□□ -0.52
PTPRD-207ENST00000463477 FKBP1AP62942 108 aaKnown RBP11.81□□□□□ -0.52
PTPRD-207ENST00000463477 MCTP1Q6DN14 999 aa11.81□□□□□ -0.52
PTPRD-207ENST00000463477 MBD3O95983 291 aa11.8□□□□□ -0.52
PTPRD-207ENST00000463477 MAP1SQ66K74 1059 aaPredicted RBP11.8□□□□□ -0.52
PTPRD-207ENST00000463477 CWC27Q6UX04 472 aaKnown RBP11.8□□□□□ -0.52
PTPRD-207ENST00000463477 SAMD7Q7Z3H4 446 aa11.8□□□□□ -0.52
PTPRD-207ENST00000463477 CCDC171Q6TFL3 1326 aa11.79□□□□□ -0.52
PTPRD-207ENST00000463477 FAM205AQ6ZU69 1335 aa11.79□□□□□ -0.52
PTPRD-207ENST00000463477 WDR33Q9C0J8 1336 aaKnown RBP11.79□□□□□ -0.52
PTPRD-207ENST00000463477 PDIA4P13667 645 aaKnown RBP11.79□□□□□ -0.52
PTPRD-207ENST00000463477 SLC5A1P13866 664 aa11.79□□□□□ -0.52
PTPRD-207ENST00000463477 NECTIN1Q15223 517 aa11.79□□□□□ -0.52
PTPRD-207ENST00000463477 VPS53Q5VIR6 699 aa11.79□□□□□ -0.52
PTPRD-207ENST00000463477 VPS37DQ86XT2 251 aa11.79□□□□□ -0.52
PTPRD-207ENST00000463477 OGFOD1Q8N543 542 aa11.79□□□□□ -0.52
PTPRD-207ENST00000463477 TRPM4Q8TD43 1214 aa11.79□□□□□ -0.52
PTPRD-207ENST00000463477 UPF3BQ9BZI7 483 aaKnown RBP11.79□□□□□ -0.52
PTPRD-207ENST00000463477 LIMCH1Q9UPQ0 1083 aa11.79□□□□□ -0.52
PTPRD-207ENST00000463477 CEP350Q5VT06 3117 aa11.79□□□□□ -0.52
PTPRD-207ENST00000463477 PASKQ96RG2 1323 aa11.79□□□□□ -0.52
PTPRD-207ENST00000463477 ZBTB22O15209 634 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 EGFRP00533 1210 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 ATP5JP18859 108 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 BCAMP50895 628 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 TBC1D10BQ4KMP7 808 aaPredicted RBP11.78□□□□□ -0.52
PTPRD-207ENST00000463477 GAS2L3Q86XJ1 694 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 RASEFQ8IZ41 740 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 MAP4K1Q92918 833 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 FBXW7Q969H0 707 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 ZSCAN31Q96LW9 406 aaPredicted RBP11.78□□□□□ -0.52
PTPRD-207ENST00000463477 MXD3Q9BW11 206 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 ALDH8A1Q9H2A2 487 aaPredicted RBP11.78□□□□□ -0.52
PTPRD-207ENST00000463477 ZSWIM6Q9HCJ5 1215 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 AKAP2Q9Y2D5 859 aa11.78□□□□□ -0.52
PTPRD-207ENST00000463477 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms