RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 DPF2Q92785 391 aa16.82■□□□□ 0.28
PHACTR4-203ENST00000463428 RAI14Q9P0K7 980 aa16.82■□□□□ 0.28
PHACTR4-203ENST00000463428 GJA3Q9Y6H8 435 aa16.82■□□□□ 0.28
PHACTR4-203ENST00000463428 MAST2Q6P0Q8 1798 aa16.81■□□□□ 0.28
PHACTR4-203ENST00000463428 TCRBV5S4A2TA0A5A2 114 aa16.81■□□□□ 0.28
PHACTR4-203ENST00000463428 GMPSP49915 693 aaPredicted RBP16.81■□□□□ 0.28
PHACTR4-203ENST00000463428 MAP3K12Q12852 859 aa16.81■□□□□ 0.28
PHACTR4-203ENST00000463428 SLFNL1Q499Z3 407 aa16.81■□□□□ 0.28
PHACTR4-203ENST00000463428 KIAA0825Q8IV33 1275 aa16.81■□□□□ 0.28
PHACTR4-203ENST00000463428 FSD1Q9BTV5 496 aa16.81■□□□□ 0.28
PHACTR4-203ENST00000463428 MRIQ9BWK5 157 aa16.81■□□□□ 0.28
PHACTR4-203ENST00000463428 TTF2Q9UNY4 1162 aaKnown RBP16.81■□□□□ 0.28
PHACTR4-203ENST00000463428 RFX7Q2KHR2 1363 aa16.81■□□□□ 0.28
PHACTR4-203ENST00000463428 PDE6AP16499 860 aa16.8■□□□□ 0.28
PHACTR4-203ENST00000463428 SLC9C2Q5TAH2 1124 aa16.8■□□□□ 0.28
PHACTR4-203ENST00000463428 FAM163AQ96GL9 167 aaPredicted RBP16.8■□□□□ 0.28
PHACTR4-203ENST00000463428 GLTPD2A6NH11 291 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 F8W031 263 aaPredicted RBP16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 RNF113AO15541 343 aaKnown RBP16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 SCNN1DP51172 638 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 HDLBPQ00341 1268 aaKnown RBP16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 UBE3CQ15386 1083 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 TMED8Q6PL24 325 aaPredicted RBP16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 MAGEB6Q8N7X4 407 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 MAST3O60307 1309 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 ZNF532Q9HCE3 1301 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 ADAMTSL1Q8N6G6 1762 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 SHTN1A0MZ66 631 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 ZFYP08048 801 aaPredicted RBP16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 USP17L8P0C7I0 530 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 CHMLP26374 656 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 ZNF280AP59817 542 aaPredicted RBP16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 DIXDC1Q155Q3 683 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 ZSCAN25Q6NSZ9 544 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 DPY19L2Q6NUT2 758 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 ADGRA1Q86SQ6 560 aa16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 DZIP1Q86YF9 867 aaKnown RBP16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 L3MBTL3Q96JM7 780 aaPredicted RBP16.79■□□□□ 0.28
PHACTR4-203ENST00000463428 GAKO14976 1311 aa16.78■□□□□ 0.28
PHACTR4-203ENST00000463428 CYP7A1P22680 504 aa16.78■□□□□ 0.28
PHACTR4-203ENST00000463428 MMP14P50281 582 aa16.78■□□□□ 0.28
PHACTR4-203ENST00000463428 ZMYM1Q5SVZ6 1142 aa16.78■□□□□ 0.28
PHACTR4-203ENST00000463428 NAA16Q6N069 864 aaPredicted RBP16.78■□□□□ 0.28
PHACTR4-203ENST00000463428 HHIPL2Q6UWX4 724 aa16.78■□□□□ 0.28
PHACTR4-203ENST00000463428 GPRC5DQ9NZD1 345 aa16.78■□□□□ 0.28
PHACTR4-203ENST00000463428 CNOT7Q9UIV1 285 aaKnown RBP16.78■□□□□ 0.28
PHACTR4-203ENST00000463428 LDHCP07864 332 aa16.77■□□□□ 0.27
PHACTR4-203ENST00000463428 CRKP46108 304 aa16.77■□□□□ 0.27
PHACTR4-203ENST00000463428 GSTO1P78417 241 aa16.77■□□□□ 0.27
PHACTR4-203ENST00000463428 LRRFIP1Q32MZ4 808 aaKnown RBP16.77■□□□□ 0.27
PHACTR4-203ENST00000463428 APPBP2Q92624 585 aa16.77■□□□□ 0.27
PHACTR4-203ENST00000463428 OSBP2Q969R2 916 aa16.77■□□□□ 0.27
PHACTR4-203ENST00000463428 SERPINA10Q9UK55 444 aa16.77■□□□□ 0.27
PHACTR4-203ENST00000463428 DAGLAQ9Y4D2 1042 aa16.77■□□□□ 0.27
PHACTR4-203ENST00000463428 PCDHAC2Q9Y5I4 1007 aa16.77■□□□□ 0.27
PHACTR4-203ENST00000463428 WDR90Q96KV7 1748 aa16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 MROH7-TTC4A0A0A0MT08 1334 aa16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 GPR75-ASB3A0A0A6YYF3 556 aa16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 POTECB2RU33 542 aa16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 HIP1O00291 1037 aa16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 NMIQ13287 307 aaPredicted RBP16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 MICALL2Q8IY33 904 aa16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 MTMR14Q8NCE2 650 aa16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 ZBED3Q96IU2 234 aaPredicted RBP16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 FAM227BQ96M60 508 aa16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 ZDHHC15Q96MV8 337 aa16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 SEC62Q99442 399 aaKnown RBP16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 PUS7LQ9H0K6 701 aaKnown RBP16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 HDAC9Q9UKV0 1011 aa16.76■□□□□ 0.27
PHACTR4-203ENST00000463428 A0A0D9SFI3 127 aa16.75■□□□□ 0.27
PHACTR4-203ENST00000463428 CDC45O75419 566 aa16.75■□□□□ 0.27
PHACTR4-203ENST00000463428 EPS15P42566 896 aa16.75■□□□□ 0.27
PHACTR4-203ENST00000463428 PPP4CP60510 307 aa16.75■□□□□ 0.27
PHACTR4-203ENST00000463428 CFAP100Q494V2 611 aa16.75■□□□□ 0.27
PHACTR4-203ENST00000463428 APOBEC3HQ6NTF7 200 aaKnown RBP16.75■□□□□ 0.27
PHACTR4-203ENST00000463428 SLF2Q8IX21 1173 aa16.75■□□□□ 0.27
PHACTR4-203ENST00000463428 OGFOD1Q8N543 542 aa16.75■□□□□ 0.27
PHACTR4-203ENST00000463428 TEKT1Q969V4 418 aa16.75■□□□□ 0.27
PHACTR4-203ENST00000463428 IL25Q9H293 177 aa16.75■□□□□ 0.27
PHACTR4-203ENST00000463428 SCN4AP35499 1836 aa16.75■□□□□ 0.27
PHACTR4-203ENST00000463428 EGFRP00533 1210 aa16.74■□□□□ 0.27
PHACTR4-203ENST00000463428 PRMT6Q96LA8 375 aaPredicted RBP16.74■□□□□ 0.27
PHACTR4-203ENST00000463428 RIOK1Q9BRS2 568 aaKnown RBP16.74■□□□□ 0.27
PHACTR4-203ENST00000463428 MYOZ2Q9NPC6 264 aa16.74■□□□□ 0.27
PHACTR4-203ENST00000463428 HELLSQ9NRZ9 838 aa16.74■□□□□ 0.27
PHACTR4-203ENST00000463428 M0R2C6 588 aa16.73■□□□□ 0.27
PHACTR4-203ENST00000463428 DYNLL1P63167 89 aaKnown RBP16.73■□□□□ 0.27
PHACTR4-203ENST00000463428 CWC27Q6UX04 472 aaKnown RBP16.73■□□□□ 0.27
PHACTR4-203ENST00000463428 DIAPH3Q9NSV4 1193 aa16.73■□□□□ 0.27
PHACTR4-203ENST00000463428 SPDYE2BA6NHP3 402 aa16.72■□□□□ 0.27
PHACTR4-203ENST00000463428 H7C1D1 291 aa16.72■□□□□ 0.27
PHACTR4-203ENST00000463428 SPDYE6P0CI01 402 aa16.72■□□□□ 0.27
PHACTR4-203ENST00000463428 BTDP43251 543 aa16.72■□□□□ 0.27
PHACTR4-203ENST00000463428 RHBDL3P58872 404 aa16.72■□□□□ 0.27
PHACTR4-203ENST00000463428 MCMDC2Q4G0Z9 681 aa16.72■□□□□ 0.27
PHACTR4-203ENST00000463428 SAMD7Q7Z3H4 446 aa16.72■□□□□ 0.27
PHACTR4-203ENST00000463428 MIGA1Q8NAN2 632 aa16.72■□□□□ 0.27
PHACTR4-203ENST00000463428 CDK5RAP2Q96SN8 1893 aa16.72■□□□□ 0.27
PHACTR4-203ENST00000463428 ECM29Q5VYK3 1845 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms