RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 CAP1Q01518 475 aa10.04□□□□□ -0.8
CDC42BPA-210ENST00000462553 IFIT5Q13325 482 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-210ENST00000462553 LMBR1LQ6UX01 489 aa10.04□□□□□ -0.8
CDC42BPA-210ENST00000462553 ZNF804AQ7Z570 1209 aa10.04□□□□□ -0.8
CDC42BPA-210ENST00000462553 IFNL1Q8IU54 200 aa10.04□□□□□ -0.8
CDC42BPA-210ENST00000462553 CDAN1Q8IWY9 1227 aa10.04□□□□□ -0.8
CDC42BPA-210ENST00000462553 PRMT6Q96LA8 375 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-210ENST00000462553 FAM205AQ6ZU69 1335 aa10.04□□□□□ -0.8
CDC42BPA-210ENST00000462553 NBPF12Q5TAG4 269 aaPredicted RBP10.03□□□□□ -0.8
CDC42BPA-210ENST00000462553 OTOP1Q7RTM1 612 aa10.03□□□□□ -0.8
CDC42BPA-210ENST00000462553 MRPL50Q8N5N7 158 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-210ENST00000462553 KAZALD1Q96I82 304 aa10.03□□□□□ -0.8
CDC42BPA-210ENST00000462553 TRIOBPQ9H2D6 2365 aa10.02□□□□□ -0.8
CDC42BPA-210ENST00000462553 UNCXA6NJT0 531 aa10.02□□□□□ -0.81
CDC42BPA-210ENST00000462553 GRM8O00222 908 aa10.02□□□□□ -0.81
CDC42BPA-210ENST00000462553 USP2O75604 605 aaPredicted RBP10.02□□□□□ -0.81
CDC42BPA-210ENST00000462553 ALDH1A1P00352 501 aa10.02□□□□□ -0.81
CDC42BPA-210ENST00000462553 RASA3Q14644 834 aa10.02□□□□□ -0.81
CDC42BPA-210ENST00000462553 SSH1Q8WYL5 1049 aa10.02□□□□□ -0.81
CDC42BPA-210ENST00000462553 TEPSINQ96N21 525 aa10.02□□□□□ -0.81
CDC42BPA-210ENST00000462553 PTPN18Q99952 460 aa10.02□□□□□ -0.81
CDC42BPA-210ENST00000462553 VEZTQ9HBM0 779 aa10.02□□□□□ -0.81
CDC42BPA-210ENST00000462553 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
CDC42BPA-210ENST00000462553 CHMP3Q9Y3E7 222 aa10.02□□□□□ -0.81
CDC42BPA-210ENST00000462553 PTPRFP10586 1907 aa10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 AK9Q5TCS8 1911 aa10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 TESPA1A2RU30 521 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 MYO1BO43795 1136 aa10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 PPP1R12BO60237 982 aaPredicted RBP10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 INHBEP58166 350 aa10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 CRHR2Q13324 411 aa10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 GRIK5Q16478 980 aa10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 MFSD14BQ5SR56 506 aa10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 LDHAL6AQ6ZMR3 332 aa10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 TDRD7Q8NHU6 1098 aaKnown RBP10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 SLC10A4Q96EP9 437 aa10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 PUS3Q9BZE2 481 aaKnown RBP10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 PLSCR2Q9NRY7 297 aa10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 TRIM17Q9Y577 477 aa10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 MGAMO43451 1857 aa10.01□□□□□ -0.81
CDC42BPA-210ENST00000462553 DOCK2Q92608 1830 aa10□□□□□ -0.81
CDC42BPA-210ENST00000462553 POTEFA5A3E0 1075 aa10□□□□□ -0.81
CDC42BPA-210ENST00000462553 GYG1P46976 350 aa10□□□□□ -0.81
CDC42BPA-210ENST00000462553 IREB2P48200 963 aaKnown RBP10□□□□□ -0.81
CDC42BPA-210ENST00000462553 HNRNPUQ00839 825 aaKnown RBP eCLIP10□□□□□ -0.81
CDC42BPA-210ENST00000462553 CCDC57Q2TAC2 916 aa10□□□□□ -0.81
CDC42BPA-210ENST00000462553 SUPT20HL1Q3ZLR7 823 aa10□□□□□ -0.81
CDC42BPA-210ENST00000462553 ANKRD13AQ8IZ07 590 aa10□□□□□ -0.81
CDC42BPA-210ENST00000462553 CD99L2Q8TCZ2 262 aa10□□□□□ -0.81
CDC42BPA-210ENST00000462553 SUCLG2Q96I99 432 aa10□□□□□ -0.81
CDC42BPA-210ENST00000462553 MS4A4AQ96JQ5 239 aa10□□□□□ -0.81
CDC42BPA-210ENST00000462553 FAM84BQ96KN1 310 aaPredicted RBP10□□□□□ -0.81
CDC42BPA-210ENST00000462553 CNNM1Q9NRU3 951 aa10□□□□□ -0.81
CDC42BPA-210ENST00000462553 ZBTB4Q9P1Z0 1013 aaPredicted RBP10□□□□□ -0.81
CDC42BPA-210ENST00000462553 ZNF70Q9UC06 446 aaPredicted RBP10□□□□□ -0.81
CDC42BPA-210ENST00000462553 SERPINA10Q9UK55 444 aa10□□□□□ -0.81
CDC42BPA-210ENST00000462553 UTYO14607 1347 aa10□□□□□ -0.81
CDC42BPA-210ENST00000462553 LAMA3Q16787 3333 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 PLIN1O60240 522 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 ALDH1L1O75891 902 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 NBPF7P0C2Y1 421 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 UBE4AQ14139 1066 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 ALDH1L2Q3SY69 923 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 RABL6Q3YEC7 729 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 TAF7LQ5H9L4 462 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 VGLL2Q8N8G2 317 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 OPTNQ96CV9 577 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 TDRD3Q9H7E2 651 aaKnown RBP9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 ELP3Q9H9T3 547 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 TTF2Q9UNY4 1162 aaKnown RBP9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 PTPN22Q9Y2R2 807 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 RIPOR2Q9Y4F9 1068 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 ZBED9Q6R2W3 1325 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 MYH2Q9UKX2 1941 aa9.99□□□□□ -0.81
CDC42BPA-210ENST00000462553 PHIPQ8WWQ0 1821 aa9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 CT47B1P0C2W7 299 aaPredicted RBP9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 HIBADHP31937 336 aaKnown RBP9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 CRKP46108 304 aa9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 RBM5P52756 815 aaKnown RBP eCLIP9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 TNFAIP1Q13829 316 aa9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 VGLL4Q14135 290 aa9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 DZIP1LQ8IYY4 767 aaKnown RBP9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 ANKRD44Q8N8A2 993 aa9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 ZNF579Q8NAF0 562 aaKnown RBP9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 BRI3BPQ8WY22 251 aa9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 ARMC5Q96C12 935 aa9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 ERO1AQ96HE7 468 aa9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 SRCIN1Q9C0H9 1055 aa9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 TMEM39BQ9GZU3 492 aa9.98□□□□□ -0.81
CDC42BPA-210ENST00000462553 TCP10L2B9ZVM9 353 aa9.97□□□□□ -0.81
CDC42BPA-210ENST00000462553 RARSP54136 660 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-210ENST00000462553 LRRC24Q50LG9 513 aa9.97□□□□□ -0.81
CDC42BPA-210ENST00000462553 SLC4A10Q6U841 1118 aa9.97□□□□□ -0.81
CDC42BPA-210ENST00000462553 FBXO33Q7Z6M2 555 aa9.97□□□□□ -0.81
CDC42BPA-210ENST00000462553 BICC1Q9H694 974 aaKnown RBP9.97□□□□□ -0.81
CDC42BPA-210ENST00000462553 SMC4Q9NTJ3 1288 aa9.97□□□□□ -0.81
CDC42BPA-210ENST00000462553 C9orf78Q9NZ63 289 aaPredicted RBP9.97□□□□□ -0.81
CDC42BPA-210ENST00000462553 IQSEC3Q9UPP2 1182 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms