RNA–Protein interactions for RNA: ENST00000461849.1

RBM39-222, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-222ENST00000461849 TNFAIP1Q13829 316 aa17.15■□□□□ 0.34
RBM39-222ENST00000461849 SUPT20HL1Q3ZLR7 823 aa17.15■□□□□ 0.34
RBM39-222ENST00000461849 ITPRIPQ8IWB1 547 aa17.15■□□□□ 0.34
RBM39-222ENST00000461849 MEIS3Q99687 375 aa17.15■□□□□ 0.34
RBM39-222ENST00000461849 CHMP4BQ9H444 224 aaKnown RBP17.15■□□□□ 0.34
RBM39-222ENST00000461849 SAGE1Q9NXZ1 904 aa17.15■□□□□ 0.34
RBM39-222ENST00000461849 CEP126Q9P2H0 1117 aa17.15■□□□□ 0.34
RBM39-222ENST00000461849 DDX19BQ9UMR2 479 aa17.15■□□□□ 0.34
RBM39-222ENST00000461849 ANGEL1Q9UNK9 670 aaKnown RBP17.15■□□□□ 0.34
RBM39-222ENST00000461849 ECM29Q5VYK3 1845 aa17.14■□□□□ 0.34
RBM39-222ENST00000461849 CIAO1O76071 339 aa17.14■□□□□ 0.33
RBM39-222ENST00000461849 CSRNP1Q96S65 589 aa17.14■□□□□ 0.33
RBM39-222ENST00000461849 TRPA1O75762 1119 aa17.13■□□□□ 0.33
RBM39-222ENST00000461849 FGFR2P21802 821 aa17.13■□□□□ 0.33
RBM39-222ENST00000461849 IL15P40933 162 aaPredicted RBP17.13■□□□□ 0.33
RBM39-222ENST00000461849 CRKP46108 304 aa17.13■□□□□ 0.33
RBM39-222ENST00000461849 ATG9AQ7Z3C6 839 aa17.13■□□□□ 0.33
RBM39-222ENST00000461849 RNF186Q9NXI6 227 aa17.13■□□□□ 0.33
RBM39-222ENST00000461849 COG6Q9Y2V7 657 aa17.13■□□□□ 0.33
RBM39-222ENST00000461849 ZBTB7BO15156 539 aaPredicted RBP17.12■□□□□ 0.33
RBM39-222ENST00000461849 TNNI2P48788 182 aa17.12■□□□□ 0.33
RBM39-222ENST00000461849 ATP2B3Q16720 1220 aa17.12■□□□□ 0.33
RBM39-222ENST00000461849 TEKT1Q969V4 418 aa17.12■□□□□ 0.33
RBM39-222ENST00000461849 TDRD3Q9H7E2 651 aaKnown RBP17.12■□□□□ 0.33
RBM39-222ENST00000461849 GNL3LQ9NVN8 582 aaKnown RBP17.12■□□□□ 0.33
RBM39-222ENST00000461849 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.12■□□□□ 0.33
RBM39-222ENST00000461849 ZNF70Q9UC06 446 aaPredicted RBP17.12■□□□□ 0.33
RBM39-222ENST00000461849 MAST3O60307 1309 aa17.12■□□□□ 0.33
RBM39-222ENST00000461849 ARAP2Q8WZ64 1704 aa17.12■□□□□ 0.33
RBM39-222ENST00000461849 SRGAP3O43295 1099 aa17.11■□□□□ 0.33
RBM39-222ENST00000461849 HDLBPQ00341 1268 aaKnown RBP17.11■□□□□ 0.33
RBM39-222ENST00000461849 MKRN3Q13064 507 aaKnown RBP17.11■□□□□ 0.33
RBM39-222ENST00000461849 RASA3Q14644 834 aa17.11■□□□□ 0.33
RBM39-222ENST00000461849 SPDYE2Q495Y8 402 aa17.11■□□□□ 0.33
RBM39-222ENST00000461849 WDR66Q8TBY9 1149 aa17.11■□□□□ 0.33
RBM39-222ENST00000461849 COPRSQ9NQ92 184 aa17.11■□□□□ 0.33
RBM39-222ENST00000461849 PA2G4Q9UQ80 394 aaKnown RBP17.11■□□□□ 0.33
RBM39-222ENST00000461849 SUGT1Q9Y2Z0 365 aa17.11■□□□□ 0.33
RBM39-222ENST00000461849 AKAP11Q9UKA4 1901 aa17.11■□□□□ 0.33
RBM39-222ENST00000461849 IREB2P48200 963 aaKnown RBP17.1■□□□□ 0.33
RBM39-222ENST00000461849 SREBF2Q12772 1141 aa17.1■□□□□ 0.33
RBM39-222ENST00000461849 AAMPQ13685 434 aa17.1■□□□□ 0.33
RBM39-222ENST00000461849 SLC10A4Q96EP9 437 aa17.1■□□□□ 0.33
RBM39-222ENST00000461849 TMOD2Q9NZR1 351 aa17.1■□□□□ 0.33
RBM39-222ENST00000461849 FZD1Q9UP38 647 aa17.1■□□□□ 0.33
RBM39-222ENST00000461849 TCP10L2B9ZVM9 353 aa17.09■□□□□ 0.33
RBM39-222ENST00000461849 GNAI2P04899 355 aa17.09■□□□□ 0.33
RBM39-222ENST00000461849 NBPF12Q5TAG4 269 aaPredicted RBP17.09■□□□□ 0.33
RBM39-222ENST00000461849 ABHD8Q96I13 439 aa17.09■□□□□ 0.33
RBM39-222ENST00000461849 AOX1Q06278 1338 aa17.09■□□□□ 0.33
RBM39-222ENST00000461849 GRIK5Q16478 980 aa17.08■□□□□ 0.32
RBM39-222ENST00000461849 MAP3K11Q16584 847 aa17.08■□□□□ 0.32
RBM39-222ENST00000461849 LDLRAD1Q5T700 205 aa17.08■□□□□ 0.32
RBM39-222ENST00000461849 MRIQ9BWK5 157 aa17.08■□□□□ 0.32
RBM39-222ENST00000461849 ZBTB40Q9NUA8 1239 aa17.08■□□□□ 0.32
RBM39-222ENST00000461849 UNCXA6NJT0 531 aa17.07■□□□□ 0.32
RBM39-222ENST00000461849 DGKZQ13574 1117 aa17.07■□□□□ 0.32
RBM39-222ENST00000461849 CRBNQ96SW2 442 aa17.07■□□□□ 0.32
RBM39-222ENST00000461849 DENND2AQ9ULE3 1009 aa17.07■□□□□ 0.32
RBM39-222ENST00000461849 AKAP2Q9Y2D5 859 aa17.07■□□□□ 0.32
RBM39-222ENST00000461849 CASP8AP2Q9UKL3 1982 aa17.07■□□□□ 0.32
RBM39-222ENST00000461849 MYH13Q9UKX3 1938 aa17.07■□□□□ 0.32
RBM39-222ENST00000461849 TM4SF4P48230 202 aa17.06■□□□□ 0.32
RBM39-222ENST00000461849 MTX1Q13505 466 aa17.06■□□□□ 0.32
RBM39-222ENST00000461849 SPRYD7Q5W111 196 aa17.06■□□□□ 0.32
RBM39-222ENST00000461849 HHIPL2Q6UWX4 724 aa17.06■□□□□ 0.32
RBM39-222ENST00000461849 ANKRD13AQ8IZ07 590 aa17.06■□□□□ 0.32
RBM39-222ENST00000461849 ZDHHC15Q96MV8 337 aa17.06■□□□□ 0.32
RBM39-222ENST00000461849 SEMA3EO15041 775 aa17.05■□□□□ 0.32
RBM39-222ENST00000461849 USP2O75604 605 aaPredicted RBP17.05■□□□□ 0.32
RBM39-222ENST00000461849 SLC34A2O95436 690 aa17.05■□□□□ 0.32
RBM39-222ENST00000461849 ZBTB48P10074 688 aaPredicted RBP17.05■□□□□ 0.32
RBM39-222ENST00000461849 ZGPATQ8N5A5 531 aaKnown RBP17.05■□□□□ 0.32
RBM39-222ENST00000461849 MCOLN1Q9GZU1 580 aa17.05■□□□□ 0.32
RBM39-222ENST00000461849 TMEM39BQ9GZU3 492 aa17.05■□□□□ 0.32
RBM39-222ENST00000461849 SSC5DA1L4H1 1573 aa17.05■□□□□ 0.32
RBM39-222ENST00000461849 MANSC4A6NHS7 340 aaPredicted RBP17.04■□□□□ 0.32
RBM39-222ENST00000461849 CCDC85CA6NKD9 419 aa17.04■□□□□ 0.32
RBM39-222ENST00000461849 LDHBP07195 334 aaKnown RBP17.04■□□□□ 0.32
RBM39-222ENST00000461849 NEFLP07196 543 aa17.04■□□□□ 0.32
RBM39-222ENST00000461849 PHKA1P46020 1223 aa17.04■□□□□ 0.32
RBM39-222ENST00000461849 INHBEP58166 350 aa17.04■□□□□ 0.32
RBM39-222ENST00000461849 TIMM10P62072 90 aa17.04■□□□□ 0.32
RBM39-222ENST00000461849 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
RBM39-222ENST00000461849 CCDC102BQ68D86 513 aa17.04■□□□□ 0.32
RBM39-222ENST00000461849 A0A1B0GUL7 405 aa17.03■□□□□ 0.32
RBM39-222ENST00000461849 TBC1D8O95759 1140 aa17.03■□□□□ 0.32
RBM39-222ENST00000461849 ALDH1A1P00352 501 aa17.03■□□□□ 0.32
RBM39-222ENST00000461849 CACNB3P54284 484 aa17.03■□□□□ 0.32
RBM39-222ENST00000461849 TFCP2Q12800 502 aa17.03■□□□□ 0.32
RBM39-222ENST00000461849 APOBEC3HQ6NTF7 200 aaKnown RBP17.03■□□□□ 0.32
RBM39-222ENST00000461849 HOOK2Q96ED9 719 aa17.03■□□□□ 0.32
RBM39-222ENST00000461849 WNK4Q96J92 1243 aa17.03■□□□□ 0.32
RBM39-222ENST00000461849 CLMNQ96JQ2 1002 aa17.03■□□□□ 0.32
RBM39-222ENST00000461849 NEUROD6Q96NK8 337 aa17.03■□□□□ 0.32
RBM39-222ENST00000461849 PRDX5P30044 214 aa17.02■□□□□ 0.32
RBM39-222ENST00000461849 ADORA1P30542 326 aa17.02■□□□□ 0.32
RBM39-222ENST00000461849 GORABQ5T7V8 394 aa17.02■□□□□ 0.32
RBM39-222ENST00000461849 FAM83AQ86UY5 434 aa17.02■□□□□ 0.32
RBM39-222ENST00000461849 EXOC6Q8TAG9 804 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms