RNA–Protein interactions for RNA: ENST00000460185.1

HLA-DQB1-207, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 428 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-207ENST00000460185 AKAP2Q9Y2D5 859 aa12.81□□□□□ -0.36
HLA-DQB1-207ENST00000460185 COG6Q9Y2V7 657 aa12.81□□□□□ -0.36
HLA-DQB1-207ENST00000460185 STK25O00506 426 aa12.8□□□□□ -0.36
HLA-DQB1-207ENST00000460185 HMMRO75330 724 aa12.8□□□□□ -0.36
HLA-DQB1-207ENST00000460185 GYG1P46976 350 aa12.8□□□□□ -0.36
HLA-DQB1-207ENST00000460185 FKBP1AP62942 108 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB1-207ENST00000460185 GNL3LQ9NVN8 582 aaKnown RBP12.8□□□□□ -0.36
HLA-DQB1-207ENST00000460185 PNMA6EA0A0J9YXQ4 647 aa12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 SASH1O94885 1247 aa12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 FGFR2P21802 821 aa12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 ZNF280AP59817 542 aaPredicted RBP12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 ATP8B2P98198 1209 aa12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 TBC1D10BQ4KMP7 808 aaPredicted RBP12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 MAP1SQ66K74 1059 aaPredicted RBP12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 CNTROBQ8N137 903 aa12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 TRPM4Q8TD43 1214 aa12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 SSH3Q8TE77 659 aa12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 TBC1D22AQ8WUA7 517 aa12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 FAM84BQ96KN1 310 aaPredicted RBP12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 MYOZ2Q9NPC6 264 aa12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 FAM205AQ6ZU69 1335 aa12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 MAST2Q6P0Q8 1798 aa12.79□□□□□ -0.36
HLA-DQB1-207ENST00000460185 EMP3P54852 163 aa12.78□□□□□ -0.36
HLA-DQB1-207ENST00000460185 MFSD14BQ5SR56 506 aa12.78□□□□□ -0.36
HLA-DQB1-207ENST00000460185 SAMD7Q7Z3H4 446 aa12.78□□□□□ -0.36
HLA-DQB1-207ENST00000460185 KIAA0825Q8IV33 1275 aa12.78□□□□□ -0.36
HLA-DQB1-207ENST00000460185 TDRD7Q8NHU6 1098 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB1-207ENST00000460185 DCPSQ96C86 337 aaKnown RBP12.78□□□□□ -0.36
HLA-DQB1-207ENST00000460185 GMLQ99445 158 aa12.78□□□□□ -0.36
HLA-DQB1-207ENST00000460185 SEMA3EO15041 775 aa12.77□□□□□ -0.37
HLA-DQB1-207ENST00000460185 SURF6O75683 361 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB1-207ENST00000460185 RRP1P56182 461 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB1-207ENST00000460185 HSP90AB4PQ58FF6 505 aa12.77□□□□□ -0.37
HLA-DQB1-207ENST00000460185 GORABQ5T7V8 394 aa12.77□□□□□ -0.37
HLA-DQB1-207ENST00000460185 RBM26Q5T8P6 1007 aaKnown RBP12.77□□□□□ -0.37
HLA-DQB1-207ENST00000460185 CEP85Q6P2H3 762 aa12.77□□□□□ -0.37
HLA-DQB1-207ENST00000460185 FBXO33Q7Z6M2 555 aa12.77□□□□□ -0.37
HLA-DQB1-207ENST00000460185 ERC1Q8IUD2 1116 aa12.77□□□□□ -0.37
HLA-DQB1-207ENST00000460185 RPAP2Q8IXW5 612 aaPredicted RBP12.77□□□□□ -0.37
HLA-DQB1-207ENST00000460185 MAST3O60307 1309 aa12.77□□□□□ -0.37
HLA-DQB1-207ENST00000460185 PASKQ96RG2 1323 aa12.77□□□□□ -0.37
HLA-DQB1-207ENST00000460185 A0A1B0GUL7 405 aa12.76□□□□□ -0.37
HLA-DQB1-207ENST00000460185 SHTN1A0MZ66 631 aa12.76□□□□□ -0.37
HLA-DQB1-207ENST00000460185 MYO1BO43795 1136 aa12.76□□□□□ -0.37
HLA-DQB1-207ENST00000460185 TFCP2Q12800 502 aa12.76□□□□□ -0.37
HLA-DQB1-207ENST00000460185 CHAF1AQ13111 956 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB1-207ENST00000460185 CDC37L1Q7L3B6 337 aa12.76□□□□□ -0.37
HLA-DQB1-207ENST00000460185 SULF1Q8IWU6 871 aa12.76□□□□□ -0.37
HLA-DQB1-207ENST00000460185 GGA3Q9NZ52 723 aa12.76□□□□□ -0.37
HLA-DQB1-207ENST00000460185 PGAP2Q9UHJ9 254 aa12.76□□□□□ -0.37
HLA-DQB1-207ENST00000460185 PITPNM2Q9BZ72 1349 aa12.76□□□□□ -0.37
HLA-DQB1-207ENST00000460185 COL1A1P02452 1464 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB1-207ENST00000460185 MYH2Q9UKX2 1941 aa12.76□□□□□ -0.37
HLA-DQB1-207ENST00000460185 ITGBL1O95965 494 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB1-207ENST00000460185 HOXB3P14651 431 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB1-207ENST00000460185 BCAMP50895 628 aa12.75□□□□□ -0.37
HLA-DQB1-207ENST00000460185 ZGPATQ8N5A5 531 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB1-207ENST00000460185 WDR66Q8TBY9 1149 aa12.75□□□□□ -0.37
HLA-DQB1-207ENST00000460185 MXD3Q9BW11 206 aa12.75□□□□□ -0.37
HLA-DQB1-207ENST00000460185 ZBTB40Q9NUA8 1239 aa12.75□□□□□ -0.37
HLA-DQB1-207ENST00000460185 DENND2AQ9ULE3 1009 aa12.75□□□□□ -0.37
HLA-DQB1-207ENST00000460185 IQSEC3Q9UPP2 1182 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB1-207ENST00000460185 JAG2Q9Y219 1238 aa12.75□□□□□ -0.37
HLA-DQB1-207ENST00000460185 TMEM88BA6NKF7 163 aa12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 F8W031 263 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 RBM5P52756 815 aaKnown RBP eCLIP12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 HIRAP54198 1017 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 DLGAP5Q15398 846 aa12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 KRT26Q7Z3Y9 468 aa12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 APOBEC3FQ8IUX4 373 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 ZNF710Q8N1W2 664 aa12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 NEUROD6Q96NK8 337 aa12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 GPR108Q9NPR9 543 aa12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 TTF2Q9UNY4 1162 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 NOP58Q9Y2X3 529 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 SUGT1Q9Y2Z0 365 aa12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 CEP350Q5VT06 3117 aa12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 PAPPA2Q9BXP8 1791 aa12.74□□□□□ -0.37
HLA-DQB1-207ENST00000460185 PDS5AQ29RF7 1337 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB1-207ENST00000460185 EGFRP00533 1210 aa12.73□□□□□ -0.37
HLA-DQB1-207ENST00000460185 SCARF1Q14162 830 aa12.73□□□□□ -0.37
HLA-DQB1-207ENST00000460185 C20orf194Q5TEA3 1177 aa12.73□□□□□ -0.37
HLA-DQB1-207ENST00000460185 ANGEL2Q5VTE6 544 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB1-207ENST00000460185 CCDC102BQ68D86 513 aa12.73□□□□□ -0.37
HLA-DQB1-207ENST00000460185 TMEM92Q6UXU6 159 aa12.73□□□□□ -0.37
HLA-DQB1-207ENST00000460185 CERS5Q8N5B7 392 aa12.73□□□□□ -0.37
HLA-DQB1-207ENST00000460185 MTMR14Q8NCE2 650 aa12.73□□□□□ -0.37
HLA-DQB1-207ENST00000460185 FBXO22Q8NEZ5 403 aa12.73□□□□□ -0.37
HLA-DQB1-207ENST00000460185 XAGE2Q96GT9 111 aa12.73□□□□□ -0.37
HLA-DQB1-207ENST00000460185 GLIS2Q9BZE0 524 aaPredicted RBP12.73□□□□□ -0.37
HLA-DQB1-207ENST00000460185 AKAP11Q9UKA4 1901 aa12.72□□□□□ -0.37
HLA-DQB1-207ENST00000460185 WNT10BO00744 389 aa12.72□□□□□ -0.37
HLA-DQB1-207ENST00000460185 PHKA1P46020 1223 aa12.72□□□□□ -0.37
HLA-DQB1-207ENST00000460185 TEKT1Q969V4 418 aa12.72□□□□□ -0.37
HLA-DQB1-207ENST00000460185 SERPINA10Q9UK55 444 aa12.72□□□□□ -0.37
HLA-DQB1-207ENST00000460185 ABT1Q9ULW3 272 aaKnown RBP12.72□□□□□ -0.37
HLA-DQB1-207ENST00000460185 SALL1Q9NSC2 1324 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 FAM205CA6NFA0 338 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 UQCRFS1P1P0C7P4 283 aa12.71□□□□□ -0.37
HLA-DQB1-207ENST00000460185 ADORA1P30542 326 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms