RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 EGFRP00533 1210 aa13.25□□□□□ -0.29
CCDC12-204ENST00000460035 ZAP70P43403 619 aa13.25□□□□□ -0.29
CCDC12-204ENST00000460035 ERICH6Q7L0X2 663 aa13.25□□□□□ -0.29
CCDC12-204ENST00000460035 LDHDQ86WU2 507 aa13.25□□□□□ -0.29
CCDC12-204ENST00000460035 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.25□□□□□ -0.29
CCDC12-204ENST00000460035 GPATCH3Q96I76 525 aa13.25□□□□□ -0.29
CCDC12-204ENST00000460035 LNPKQ9C0E8 428 aa13.25□□□□□ -0.29
CCDC12-204ENST00000460035 LRP2BPQ9P2M1 347 aa13.25□□□□□ -0.29
CCDC12-204ENST00000460035 MAST3O60307 1309 aa13.24□□□□□ -0.29
CCDC12-204ENST00000460035 PRDX5P30044 214 aa13.24□□□□□ -0.29
CCDC12-204ENST00000460035 HDLBPQ00341 1268 aaKnown RBP13.24□□□□□ -0.29
CCDC12-204ENST00000460035 CFAP100Q494V2 611 aa13.24□□□□□ -0.29
CCDC12-204ENST00000460035 CHADLQ6NUI6 762 aa13.24□□□□□ -0.29
CCDC12-204ENST00000460035 MTMR14Q8NCE2 650 aa13.24□□□□□ -0.29
CCDC12-204ENST00000460035 SMC1BQ8NDV3 1235 aa13.24□□□□□ -0.29
CCDC12-204ENST00000460035 RBM46Q8TBY0 533 aaKnown RBP13.24□□□□□ -0.29
CCDC12-204ENST00000460035 DNAJC2Q99543 621 aaKnown RBP13.24□□□□□ -0.29
CCDC12-204ENST00000460035 BOLA2Q9H3K6 86 aa13.24□□□□□ -0.29
CCDC12-204ENST00000460035 ECHDC1Q9NTX5 307 aa13.24□□□□□ -0.29
CCDC12-204ENST00000460035 RAI14Q9P0K7 980 aa13.24□□□□□ -0.29
CCDC12-204ENST00000460035 NDUFB9Q9Y6M9 179 aa13.24□□□□□ -0.29
CCDC12-204ENST00000460035 IGSF3O75054 1194 aa13.23□□□□□ -0.29
CCDC12-204ENST00000460035 ATP5JP18859 108 aa13.23□□□□□ -0.29
CCDC12-204ENST00000460035 CRKP46108 304 aa13.23□□□□□ -0.29
CCDC12-204ENST00000460035 NUCB1Q02818 461 aa13.23□□□□□ -0.29
CCDC12-204ENST00000460035 NBPF9Q3BBW0 867 aa13.23□□□□□ -0.29
CCDC12-204ENST00000460035 MAP1SQ66K74 1059 aaPredicted RBP13.23□□□□□ -0.29
CCDC12-204ENST00000460035 CHD1LQ86WJ1 897 aa13.23□□□□□ -0.29
CCDC12-204ENST00000460035 DZIP1Q86YF9 867 aaKnown RBP13.23□□□□□ -0.29
CCDC12-204ENST00000460035 OTUD7AQ8TE49 926 aaPredicted RBP13.23□□□□□ -0.29
CCDC12-204ENST00000460035 ZC3H15Q8WU90 426 aaKnown RBP13.23□□□□□ -0.29
CCDC12-204ENST00000460035 TEKT1Q969V4 418 aa13.23□□□□□ -0.29
CCDC12-204ENST00000460035 DCPSQ96C86 337 aaKnown RBP13.23□□□□□ -0.29
CCDC12-204ENST00000460035 ZBED3Q96IU2 234 aaPredicted RBP13.23□□□□□ -0.29
CCDC12-204ENST00000460035 MRIQ9BWK5 157 aa13.23□□□□□ -0.29
CCDC12-204ENST00000460035 PGAP2Q9UHJ9 254 aa13.23□□□□□ -0.29
CCDC12-204ENST00000460035 SERPINA10Q9UK55 444 aa13.23□□□□□ -0.29
CCDC12-204ENST00000460035 PCDHAC2Q9Y5I4 1007 aa13.23□□□□□ -0.29
CCDC12-204ENST00000460035 SALL3Q9BXA9 1300 aa13.22□□□□□ -0.29
CCDC12-204ENST00000460035 WNT10BO00744 389 aa13.22□□□□□ -0.29
CCDC12-204ENST00000460035 CYP2E1P05181 493 aaPredicted RBP13.22□□□□□ -0.29
CCDC12-204ENST00000460035 ERICH6BQ5W0A0 696 aa13.22□□□□□ -0.29
CCDC12-204ENST00000460035 TSHZ3Q63HK5 1081 aa13.22□□□□□ -0.29
CCDC12-204ENST00000460035 CNTROBQ8N137 903 aa13.22□□□□□ -0.29
CCDC12-204ENST00000460035 PRMT6Q96LA8 375 aaPredicted RBP13.22□□□□□ -0.29
CCDC12-204ENST00000460035 PIH1D3Q9NQM4 214 aaKnown RBP13.22□□□□□ -0.29
CCDC12-204ENST00000460035 MYH1P12882 1939 aa13.21□□□□□ -0.29
CCDC12-204ENST00000460035 ASTN2O75129 1339 aaPredicted RBP13.21□□□□□ -0.29
CCDC12-204ENST00000460035 TTC41PQ6P2S7 1318 aa13.21□□□□□ -0.29
CCDC12-204ENST00000460035 GOLIM4O00461 696 aa13.21□□□□□ -0.29
CCDC12-204ENST00000460035 ERC2O15083 957 aa13.21□□□□□ -0.29
CCDC12-204ENST00000460035 MYO1BO43795 1136 aa13.21□□□□□ -0.29
CCDC12-204ENST00000460035 IDH1O75874 414 aaKnown RBP13.21□□□□□ -0.29
CCDC12-204ENST00000460035 MX1P20591 662 aa13.21□□□□□ -0.29
CCDC12-204ENST00000460035 TTF1Q15361 905 aaPredicted RBP13.21□□□□□ -0.29
CCDC12-204ENST00000460035 DIXDC1Q155Q3 683 aa13.21□□□□□ -0.29
CCDC12-204ENST00000460035 ANGEL2Q5VTE6 544 aaKnown RBP13.21□□□□□ -0.29
CCDC12-204ENST00000460035 HHIPL2Q6UWX4 724 aa13.21□□□□□ -0.29
CCDC12-204ENST00000460035 SLF2Q8IX21 1173 aa13.21□□□□□ -0.29
CCDC12-204ENST00000460035 CCDC136Q96JN2 1154 aa13.21□□□□□ -0.29
CCDC12-204ENST00000460035 ANTXR1Q9H6X2 564 aa13.21□□□□□ -0.29
CCDC12-204ENST00000460035 CLRN2A0PK11 232 aa13.2□□□□□ -0.3
CCDC12-204ENST00000460035 SPDYE2BA6NHP3 402 aa13.2□□□□□ -0.3
CCDC12-204ENST00000460035 LDHCP07864 332 aa13.2□□□□□ -0.3
CCDC12-204ENST00000460035 SPDYE6P0CI01 402 aa13.2□□□□□ -0.3
CCDC12-204ENST00000460035 GSTO1P78417 241 aa13.2□□□□□ -0.3
CCDC12-204ENST00000460035 MECOMQ03112 1051 aa13.2□□□□□ -0.3
CCDC12-204ENST00000460035 FSTL1Q12841 308 aa13.2□□□□□ -0.3
CCDC12-204ENST00000460035 USP48Q86UV5 1035 aa13.2□□□□□ -0.3
CCDC12-204ENST00000460035 HAUS7Q99871 368 aa13.2□□□□□ -0.3
CCDC12-204ENST00000460035 TDRD3Q9H7E2 651 aaKnown RBP13.2□□□□□ -0.3
CCDC12-204ENST00000460035 PAG1Q9NWQ8 432 aa13.2□□□□□ -0.3
CCDC12-204ENST00000460035 GGA3Q9NZ52 723 aa13.2□□□□□ -0.3
CCDC12-204ENST00000460035 PITPNM2Q9BZ72 1349 aa13.19□□□□□ -0.3
CCDC12-204ENST00000460035 MAP3K12Q12852 859 aa13.19□□□□□ -0.3
CCDC12-204ENST00000460035 NAA16Q6N069 864 aaPredicted RBP13.19□□□□□ -0.3
CCDC12-204ENST00000460035 TMED8Q6PL24 325 aaPredicted RBP13.19□□□□□ -0.3
CCDC12-204ENST00000460035 CDC37L1Q7L3B6 337 aa13.19□□□□□ -0.3
CCDC12-204ENST00000460035 KRT26Q7Z3Y9 468 aa13.19□□□□□ -0.3
CCDC12-204ENST00000460035 SULF1Q8IWU6 871 aa13.19□□□□□ -0.3
CCDC12-204ENST00000460035 NSUN4Q96CB9 384 aaKnown RBP13.19□□□□□ -0.3
CCDC12-204ENST00000460035 EDC3Q96F86 508 aaKnown RBP13.19□□□□□ -0.3
CCDC12-204ENST00000460035 ZDHHC15Q96MV8 337 aa13.19□□□□□ -0.3
CCDC12-204ENST00000460035 GLIS2Q9BZE0 524 aaPredicted RBP13.19□□□□□ -0.3
CCDC12-204ENST00000460035 VEZTQ9HBM0 779 aa13.19□□□□□ -0.3
CCDC12-204ENST00000460035 ZNF70Q9UC06 446 aaPredicted RBP13.19□□□□□ -0.3
CCDC12-204ENST00000460035 STAP2Q9UGK3 403 aa13.19□□□□□ -0.3
CCDC12-204ENST00000460035 SCAF8Q9UPN6 1271 aaKnown RBP13.19□□□□□ -0.3
CCDC12-204ENST00000460035 GAKO14976 1311 aa13.18□□□□□ -0.3
CCDC12-204ENST00000460035 AOX1Q06278 1338 aa13.18□□□□□ -0.3
CCDC12-204ENST00000460035 GLRX3O76003 335 aaKnown RBP13.18□□□□□ -0.3
CCDC12-204ENST00000460035 MAP4K4O95819 1239 aaPredicted RBP13.18□□□□□ -0.3
CCDC12-204ENST00000460035 CYP7A1P22680 504 aa13.18□□□□□ -0.3
CCDC12-204ENST00000460035 PDE1AP54750 535 aa13.18□□□□□ -0.3
CCDC12-204ENST00000460035 C1QTNF8P60827 252 aa13.18□□□□□ -0.3
CCDC12-204ENST00000460035 APOBEC3HQ6NTF7 200 aaKnown RBP13.18□□□□□ -0.3
CCDC12-204ENST00000460035 PI4K2BQ8TCG2 481 aa13.18□□□□□ -0.3
CCDC12-204ENST00000460035 ZNF384Q8TF68 577 aa13.18□□□□□ -0.3
CCDC12-204ENST00000460035 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
CCDC12-204ENST00000460035 USP40Q9NVE5 1235 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms