RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 PA2G4Q9UQ80 394 aaKnown RBP19.35■□□□□ 0.69
SDF4-204ENST00000459994 MMP14P50281 582 aa19.34■□□□□ 0.69
SDF4-204ENST00000459994 CHAF1AQ13111 956 aaPredicted RBP19.34■□□□□ 0.69
SDF4-204ENST00000459994 APOBEC3FQ8IUX4 373 aaKnown RBP19.34■□□□□ 0.69
SDF4-204ENST00000459994 CCDC102AQ96A19 550 aa19.34■□□□□ 0.69
SDF4-204ENST00000459994 FKBP1BP68106 108 aa19.33■□□□□ 0.68
SDF4-204ENST00000459994 CSRNP1Q96S65 589 aa19.33■□□□□ 0.68
SDF4-204ENST00000459994 DEFB129Q9H1M3 183 aa19.33■□□□□ 0.68
SDF4-204ENST00000459994 TTF2Q9UNY4 1162 aaKnown RBP19.33■□□□□ 0.68
SDF4-204ENST00000459994 RBM5P52756 815 aaKnown RBP eCLIP19.32■□□□□ 0.68
SDF4-204ENST00000459994 TTLL12Q14166 644 aaPredicted RBP19.32■□□□□ 0.68
SDF4-204ENST00000459994 CDAN1Q8IWY9 1227 aa19.32■□□□□ 0.68
SDF4-204ENST00000459994 MKRN3Q13064 507 aaKnown RBP19.31■□□□□ 0.68
SDF4-204ENST00000459994 PUM3Q15397 648 aaKnown RBP19.31■□□□□ 0.68
SDF4-204ENST00000459994 TDRD3Q9H7E2 651 aaKnown RBP19.31■□□□□ 0.68
SDF4-204ENST00000459994 VEZTQ9HBM0 779 aa19.31■□□□□ 0.68
SDF4-204ENST00000459994 RNF186Q9NXI6 227 aa19.31■□□□□ 0.68
SDF4-204ENST00000459994 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.31■□□□□ 0.68
SDF4-204ENST00000459994 NBPF12Q5TAG4 269 aaPredicted RBP19.3■□□□□ 0.68
SDF4-204ENST00000459994 VPS37DQ86XT2 251 aa19.3■□□□□ 0.68
SDF4-204ENST00000459994 ZNF70Q9UC06 446 aaPredicted RBP19.3■□□□□ 0.68
SDF4-204ENST00000459994 MYH2Q9UKX2 1941 aa19.29■□□□□ 0.68
SDF4-204ENST00000459994 TRPA1O75762 1119 aa19.29■□□□□ 0.68
SDF4-204ENST00000459994 CRKP46108 304 aa19.29■□□□□ 0.68
SDF4-204ENST00000459994 MTX1Q13505 466 aa19.29■□□□□ 0.68
SDF4-204ENST00000459994 SPDYE2Q495Y8 402 aa19.29■□□□□ 0.68
SDF4-204ENST00000459994 CAVIN4Q5BKX8 364 aa19.29■□□□□ 0.68
SDF4-204ENST00000459994 RPAP2Q8IXW5 612 aaPredicted RBP19.29■□□□□ 0.68
SDF4-204ENST00000459994 C1orf115Q9H7X2 142 aa19.29■□□□□ 0.68
SDF4-204ENST00000459994 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.29■□□□□ 0.68
SDF4-204ENST00000459994 ANGEL1Q9UNK9 670 aaKnown RBP19.29■□□□□ 0.68
SDF4-204ENST00000459994 CA12O43570 354 aa19.28■□□□□ 0.68
SDF4-204ENST00000459994 NF2P35240 595 aa19.28■□□□□ 0.68
SDF4-204ENST00000459994 CLMNQ96JQ2 1002 aa19.28■□□□□ 0.68
SDF4-204ENST00000459994 SERPINA10Q9UK55 444 aa19.28■□□□□ 0.68
SDF4-204ENST00000459994 PCDHB15Q9Y5E8 787 aa19.28■□□□□ 0.68
SDF4-204ENST00000459994 FRAT2O75474 233 aaPredicted RBP19.27■□□□□ 0.68
SDF4-204ENST00000459994 CIAO1O76071 339 aa19.27■□□□□ 0.68
SDF4-204ENST00000459994 IFIT1P09914 478 aaKnown RBP19.27■□□□□ 0.68
SDF4-204ENST00000459994 SLC5A1P13866 664 aa19.27■□□□□ 0.68
SDF4-204ENST00000459994 ATP8B2P98198 1209 aa19.27■□□□□ 0.68
SDF4-204ENST00000459994 RASA3Q14644 834 aa19.27■□□□□ 0.68
SDF4-204ENST00000459994 LDLRAD1Q5T700 205 aa19.27■□□□□ 0.68
SDF4-204ENST00000459994 CEP85Q6P2H3 762 aa19.27■□□□□ 0.68
SDF4-204ENST00000459994 LPIN2Q92539 896 aa19.27■□□□□ 0.68
SDF4-204ENST00000459994 AK9Q5TCS8 1911 aa19.26■□□□□ 0.67
SDF4-204ENST00000459994 TCP10L2B9ZVM9 353 aa19.26■□□□□ 0.67
SDF4-204ENST00000459994 MYO1BO43795 1136 aa19.26■□□□□ 0.67
SDF4-204ENST00000459994 ADORA1P30542 326 aa19.26■□□□□ 0.67
SDF4-204ENST00000459994 CACNB3P54284 484 aa19.26■□□□□ 0.67
SDF4-204ENST00000459994 ATP2B3Q16720 1220 aa19.26■□□□□ 0.67
SDF4-204ENST00000459994 ARMC9Q7Z3E5 817 aa19.26■□□□□ 0.67
SDF4-204ENST00000459994 ABHD8Q96I13 439 aa19.26■□□□□ 0.67
SDF4-204ENST00000459994 MYO5AQ9Y4I1 1855 aaKnown RBP19.25■□□□□ 0.67
SDF4-204ENST00000459994 TEPSINQ96N21 525 aa19.25■□□□□ 0.67
SDF4-204ENST00000459994 COPRSQ9NQ92 184 aa19.25■□□□□ 0.67
SDF4-204ENST00000459994 PPP2R3BQ9Y5P8 575 aa19.25■□□□□ 0.67
SDF4-204ENST00000459994 USP2O75604 605 aaPredicted RBP19.24■□□□□ 0.67
SDF4-204ENST00000459994 PHKA1P46020 1223 aa19.24■□□□□ 0.67
SDF4-204ENST00000459994 MAP3K11Q16584 847 aa19.24■□□□□ 0.67
SDF4-204ENST00000459994 SIRT2Q8IXJ6 389 aa19.24■□□□□ 0.67
SDF4-204ENST00000459994 TMEM39BQ9GZU3 492 aa19.24■□□□□ 0.67
SDF4-204ENST00000459994 SAGE1Q9NXZ1 904 aa19.24■□□□□ 0.67
SDF4-204ENST00000459994 CEP126Q9P2H0 1117 aa19.24■□□□□ 0.67
SDF4-204ENST00000459994 PNMA6EA0A0J9YXQ4 647 aa19.23■□□□□ 0.67
SDF4-204ENST00000459994 SRGAP3O43295 1099 aa19.23■□□□□ 0.67
SDF4-204ENST00000459994 SSH3Q8TE77 659 aa19.23■□□□□ 0.67
SDF4-204ENST00000459994 TBC1D22AQ8WUA7 517 aa19.23■□□□□ 0.67
SDF4-204ENST00000459994 MCOLN1Q9GZU1 580 aa19.23■□□□□ 0.67
SDF4-204ENST00000459994 PPP4R2Q9NY27 417 aa19.23■□□□□ 0.67
SDF4-204ENST00000459994 FBXO3Q9UK99 471 aa19.23■□□□□ 0.67
SDF4-204ENST00000459994 HMMRO75330 724 aa19.22■□□□□ 0.67
SDF4-204ENST00000459994 PRDX5P30044 214 aa19.22■□□□□ 0.67
SDF4-204ENST00000459994 GJA5P36382 358 aa19.22■□□□□ 0.67
SDF4-204ENST00000459994 IL15P40933 162 aaPredicted RBP19.22■□□□□ 0.67
SDF4-204ENST00000459994 TIMM10P62072 90 aa19.22■□□□□ 0.67
SDF4-204ENST00000459994 HDAC1Q13547 482 aaPredicted RBP19.22■□□□□ 0.67
SDF4-204ENST00000459994 POLA2Q14181 598 aa19.22■□□□□ 0.67
SDF4-204ENST00000459994 SPRYD7Q5W111 196 aa19.22■□□□□ 0.67
SDF4-204ENST00000459994 APOBEC3HQ6NTF7 200 aaKnown RBP19.22■□□□□ 0.67
SDF4-204ENST00000459994 TBC1D8O95759 1140 aa19.21■□□□□ 0.67
SDF4-204ENST00000459994 TFCP2Q12800 502 aa19.21■□□□□ 0.67
SDF4-204ENST00000459994 TEKT1Q969V4 418 aa19.21■□□□□ 0.67
SDF4-204ENST00000459994 R3HDMLQ9H3Y0 253 aa19.21■□□□□ 0.67
SDF4-204ENST00000459994 TM4SF4P48230 202 aa19.2■□□□□ 0.66
SDF4-204ENST00000459994 HDLBPQ00341 1268 aaKnown RBP19.2■□□□□ 0.66
SDF4-204ENST00000459994 DGKZQ13574 1117 aa19.2■□□□□ 0.66
SDF4-204ENST00000459994 DIXDC1Q155Q3 683 aa19.2■□□□□ 0.66
SDF4-204ENST00000459994 WNK4Q96J92 1243 aa19.2■□□□□ 0.66
SDF4-204ENST00000459994 ZDHHC15Q96MV8 337 aa19.2■□□□□ 0.66
SDF4-204ENST00000459994 RWDD1Q9H446 243 aaPredicted RBP19.2■□□□□ 0.66
SDF4-204ENST00000459994 GTF3C3Q9Y5Q9 886 aa19.2■□□□□ 0.66
SDF4-204ENST00000459994 DOCK2Q92608 1830 aa19.2■□□□□ 0.66
SDF4-204ENST00000459994 SUPT20HL1Q3ZLR7 823 aa19.19■□□□□ 0.66
SDF4-204ENST00000459994 CCDC102BQ68D86 513 aa19.19■□□□□ 0.66
SDF4-204ENST00000459994 SLC10A4Q96EP9 437 aa19.19■□□□□ 0.66
SDF4-204ENST00000459994 PPP1R12BO60237 982 aaPredicted RBP19.18■□□□□ 0.66
SDF4-204ENST00000459994 TNFAIP1Q13829 316 aa19.18■□□□□ 0.66
SDF4-204ENST00000459994 WDR66Q8TBY9 1149 aa19.18■□□□□ 0.66
SDF4-204ENST00000459994 CNKSR2Q8WXI2 1034 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms