RNA–Protein interactions for RNA: ENST00000459979.2

HOXD3-204, Transcript of homeobox D3, humanhuman

TSL 1 (best)

Gene HOXD3, Length 1,055 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-204ENST00000459979 VPS37DQ86XT2 251 aa22.99■■□□□ 1.27
HOXD3-204ENST00000459979 MTMR14Q8NCE2 650 aa22.99■■□□□ 1.27
HOXD3-204ENST00000459979 ANGEL1Q9UNK9 670 aaKnown RBP22.99■■□□□ 1.27
HOXD3-204ENST00000459979 ZBTB22O15209 634 aa22.98■■□□□ 1.27
HOXD3-204ENST00000459979 TNRC18O15417 2968 aaPredicted RBP22.98■■□□□ 1.27
HOXD3-204ENST00000459979 SLC5A1P13866 664 aa22.98■■□□□ 1.27
HOXD3-204ENST00000459979 TM4SF4P48230 202 aa22.98■■□□□ 1.27
HOXD3-204ENST00000459979 DLGAP5Q15398 846 aa22.98■■□□□ 1.27
HOXD3-204ENST00000459979 ITPRIPQ8IWB1 547 aa22.98■■□□□ 1.27
HOXD3-204ENST00000459979 BCAMP50895 628 aa22.97■■□□□ 1.27
HOXD3-204ENST00000459979 HPS5Q9UPZ3 1129 aa22.97■■□□□ 1.27
HOXD3-204ENST00000459979 SSC5DA1L4H1 1573 aa22.97■■□□□ 1.27
HOXD3-204ENST00000459979 PDE4DIPQ5VU43 2346 aa22.96■■□□□ 1.27
HOXD3-204ENST00000459979 PNMA6EA0A0J9YXQ4 647 aa22.96■■□□□ 1.27
HOXD3-204ENST00000459979 ATP8B2P98198 1209 aa22.96■■□□□ 1.27
HOXD3-204ENST00000459979 ATP2B3Q16720 1220 aa22.96■■□□□ 1.27
HOXD3-204ENST00000459979 DEFB129Q9H1M3 183 aa22.96■■□□□ 1.27
HOXD3-204ENST00000459979 R3HDMLQ9H3Y0 253 aa22.96■■□□□ 1.27
HOXD3-204ENST00000459979 AOX1Q06278 1338 aa22.96■■□□□ 1.27
HOXD3-204ENST00000459979 CLRN2A0PK11 232 aa22.95■■□□□ 1.26
HOXD3-204ENST00000459979 GPR25O00155 361 aa22.95■■□□□ 1.26
HOXD3-204ENST00000459979 POLA2Q14181 598 aa22.95■■□□□ 1.26
HOXD3-204ENST00000459979 MFSD14BQ5SR56 506 aa22.95■■□□□ 1.26
HOXD3-204ENST00000459979 LDLRAD1Q5T700 205 aa22.95■■□□□ 1.26
HOXD3-204ENST00000459979 PANK1Q8TE04 598 aa22.95■■□□□ 1.26
HOXD3-204ENST00000459979 SSH3Q8TE77 659 aa22.95■■□□□ 1.26
HOXD3-204ENST00000459979 TBC1D22AQ8WUA7 517 aa22.95■■□□□ 1.26
HOXD3-204ENST00000459979 ARAP2Q8WZ64 1704 aa22.95■■□□□ 1.26
HOXD3-204ENST00000459979 COL1A1P02452 1464 aaPredicted RBP22.94■■□□□ 1.26
HOXD3-204ENST00000459979 SREBF2Q12772 1141 aa22.94■■□□□ 1.26
HOXD3-204ENST00000459979 CFAP100Q494V2 611 aa22.94■■□□□ 1.26
HOXD3-204ENST00000459979 SPRYD7Q5W111 196 aa22.94■■□□□ 1.26
HOXD3-204ENST00000459979 CLMNQ96JQ2 1002 aa22.93■■□□□ 1.26
HOXD3-204ENST00000459979 LAMB1P07942 1786 aa22.92■■□□□ 1.26
HOXD3-204ENST00000459979 PRMT6Q96LA8 375 aaPredicted RBP22.92■■□□□ 1.26
HOXD3-204ENST00000459979 VEZTQ9HBM0 779 aa22.92■■□□□ 1.26
HOXD3-204ENST00000459979 SERPINA10Q9UK55 444 aa22.92■■□□□ 1.26
HOXD3-204ENST00000459979 IQSEC3Q9UPP2 1182 aaPredicted RBP22.92■■□□□ 1.26
HOXD3-204ENST00000459979 AKAP2Q9Y2D5 859 aa22.92■■□□□ 1.26
HOXD3-204ENST00000459979 SUGT1Q9Y2Z0 365 aa22.92■■□□□ 1.26
HOXD3-204ENST00000459979 OTOFQ9HC10 1997 aa22.92■■□□□ 1.26
HOXD3-204ENST00000459979 FRAT2O75474 233 aaPredicted RBP22.91■■□□□ 1.26
HOXD3-204ENST00000459979 MYH13Q9UKX3 1938 aa22.9■■□□□ 1.26
HOXD3-204ENST00000459979 SPDYE2BA6NHP3 402 aa22.9■■□□□ 1.26
HOXD3-204ENST00000459979 SEMA3EO15041 775 aa22.9■■□□□ 1.26
HOXD3-204ENST00000459979 SPDYE6P0CI01 402 aa22.9■■□□□ 1.26
HOXD3-204ENST00000459979 HDLBPQ00341 1268 aaKnown RBP22.9■■□□□ 1.26
HOXD3-204ENST00000459979 TFCP2Q12800 502 aa22.9■■□□□ 1.26
HOXD3-204ENST00000459979 G3BP1Q13283 466 aaKnown RBP eCLIP22.9■■□□□ 1.26
HOXD3-204ENST00000459979 MVPQ14764 893 aaKnown RBP22.9■■□□□ 1.26
HOXD3-204ENST00000459979 PKN2Q16513 984 aaKnown RBP22.9■■□□□ 1.26
HOXD3-204ENST00000459979 SLC10A4Q96EP9 437 aa22.9■■□□□ 1.26
HOXD3-204ENST00000459979 MRIQ9BWK5 157 aa22.9■■□□□ 1.26
HOXD3-204ENST00000459979 GNL3LQ9NVN8 582 aaKnown RBP22.9■■□□□ 1.26
HOXD3-204ENST00000459979 TTF2Q9UNY4 1162 aaKnown RBP22.9■■□□□ 1.26
HOXD3-204ENST00000459979 FKTNO75072 461 aa22.89■■□□□ 1.25
HOXD3-204ENST00000459979 RBM5P52756 815 aaKnown RBP eCLIP22.89■■□□□ 1.25
HOXD3-204ENST00000459979 NBPF12Q5TAG4 269 aaPredicted RBP22.89■■□□□ 1.25
HOXD3-204ENST00000459979 WDR66Q8TBY9 1149 aa22.89■■□□□ 1.25
HOXD3-204ENST00000459979 WNK4Q96J92 1243 aa22.89■■□□□ 1.25
HOXD3-204ENST00000459979 C1orf115Q9H7X2 142 aa22.89■■□□□ 1.25
HOXD3-204ENST00000459979 DDX19BQ9UMR2 479 aa22.89■■□□□ 1.25
HOXD3-204ENST00000459979 NOP58Q9Y2X3 529 aaKnown RBP22.89■■□□□ 1.25
HOXD3-204ENST00000459979 MYO1BO43795 1136 aa22.88■■□□□ 1.25
HOXD3-204ENST00000459979 TIMM10P62072 90 aa22.88■■□□□ 1.25
HOXD3-204ENST00000459979 CHAF1AQ13111 956 aaPredicted RBP22.88■■□□□ 1.25
HOXD3-204ENST00000459979 PDE3AQ14432 1141 aa22.88■■□□□ 1.25
HOXD3-204ENST00000459979 MAP3K11Q16584 847 aa22.88■■□□□ 1.25
HOXD3-204ENST00000459979 NOM1Q5C9Z4 860 aaKnown RBP22.88■■□□□ 1.25
HOXD3-204ENST00000459979 A0A1B0GUL7 405 aa22.87■■□□□ 1.25
HOXD3-204ENST00000459979 PPP1R12BO60237 982 aaPredicted RBP22.87■■□□□ 1.25
HOXD3-204ENST00000459979 CEP85Q6P2H3 762 aa22.87■■□□□ 1.25
HOXD3-204ENST00000459979 CFHR5Q9BXR6 569 aa22.87■■□□□ 1.25
HOXD3-204ENST00000459979 PPP2R3BQ9Y5P8 575 aa22.87■■□□□ 1.25
HOXD3-204ENST00000459979 MANSC4A6NHS7 340 aaPredicted RBP22.86■■□□□ 1.25
HOXD3-204ENST00000459979 ADORA1P30542 326 aa22.86■■□□□ 1.25
HOXD3-204ENST00000459979 PHKA1P46020 1223 aa22.86■■□□□ 1.25
HOXD3-204ENST00000459979 GRIK5Q16478 980 aa22.86■■□□□ 1.25
HOXD3-204ENST00000459979 CCDC102BQ68D86 513 aa22.86■■□□□ 1.25
HOXD3-204ENST00000459979 FBXO46Q6PJ61 603 aaPredicted RBP22.86■■□□□ 1.25
HOXD3-204ENST00000459979 IFNL1Q8IU54 200 aa22.86■■□□□ 1.25
HOXD3-204ENST00000459979 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.86■■□□□ 1.25
HOXD3-204ENST00000459979 CHMP4BQ9H444 224 aaKnown RBP22.86■■□□□ 1.25
HOXD3-204ENST00000459979 GPR108Q9NPR9 543 aa22.86■■□□□ 1.25
HOXD3-204ENST00000459979 DENND2AQ9ULE3 1009 aa22.86■■□□□ 1.25
HOXD3-204ENST00000459979 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.86■■□□□ 1.25
HOXD3-204ENST00000459979 IGF2BP3O00425 579 aaKnown RBP eCLIP22.85■■□□□ 1.25
HOXD3-204ENST00000459979 GJA5P36382 358 aa22.85■■□□□ 1.25
HOXD3-204ENST00000459979 RASA3Q14644 834 aa22.85■■□□□ 1.25
HOXD3-204ENST00000459979 XAGE2Q96GT9 111 aa22.85■■□□□ 1.25
HOXD3-204ENST00000459979 ZBTB40Q9NUA8 1239 aa22.85■■□□□ 1.25
HOXD3-204ENST00000459979 COG6Q9Y2V7 657 aa22.85■■□□□ 1.25
HOXD3-204ENST00000459979 MAST3O60307 1309 aa22.84■■□□□ 1.25
HOXD3-204ENST00000459979 PDS5AQ29RF7 1337 aaKnown RBP22.84■■□□□ 1.25
HOXD3-204ENST00000459979 SALL1Q9NSC2 1324 aa22.84■■□□□ 1.25
HOXD3-204ENST00000459979 USP2O75604 605 aaPredicted RBP22.84■■□□□ 1.25
HOXD3-204ENST00000459979 SURF6O75683 361 aaKnown RBP22.84■■□□□ 1.25
HOXD3-204ENST00000459979 CRKP46108 304 aa22.84■■□□□ 1.25
HOXD3-204ENST00000459979 SUPT20HL1Q3ZLR7 823 aa22.84■■□□□ 1.25
HOXD3-204ENST00000459979 ALDH1A1P00352 501 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms