RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 PCDHAC2Q9Y5I4 1007 aa17.27■□□□□ 0.36
SMPD4-215ENST00000457039 MAST3O60307 1309 aa17.26■□□□□ 0.35
SMPD4-215ENST00000457039 WNT10BO00744 389 aa17.26■□□□□ 0.35
SMPD4-215ENST00000457039 LDHBP07195 334 aaKnown RBP17.26■□□□□ 0.35
SMPD4-215ENST00000457039 CRKP46108 304 aa17.26■□□□□ 0.35
SMPD4-215ENST00000457039 CFAP100Q494V2 611 aa17.26■□□□□ 0.35
SMPD4-215ENST00000457039 B4GALNT3Q6L9W6 998 aa17.26■□□□□ 0.35
SMPD4-215ENST00000457039 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
SMPD4-215ENST00000457039 ABCF2Q9UG63 623 aa17.26■□□□□ 0.35
SMPD4-215ENST00000457039 NDUFB9Q9Y6M9 179 aa17.26■□□□□ 0.35
SMPD4-215ENST00000457039 ASTN2O75129 1339 aaPredicted RBP17.25■□□□□ 0.35
SMPD4-215ENST00000457039 SPDYE2BA6NHP3 402 aa17.25■□□□□ 0.35
SMPD4-215ENST00000457039 SPDYE6P0CI01 402 aa17.25■□□□□ 0.35
SMPD4-215ENST00000457039 NBPF9Q3BBW0 867 aa17.25■□□□□ 0.35
SMPD4-215ENST00000457039 SPTY2D1Q68D10 685 aaPredicted RBP17.25■□□□□ 0.35
SMPD4-215ENST00000457039 CHD1LQ86WJ1 897 aa17.25■□□□□ 0.35
SMPD4-215ENST00000457039 SMC1BQ8NDV3 1235 aa17.25■□□□□ 0.35
SMPD4-215ENST00000457039 ZNF384Q8TF68 577 aa17.25■□□□□ 0.35
SMPD4-215ENST00000457039 LNPKQ9C0E8 428 aa17.25■□□□□ 0.35
SMPD4-215ENST00000457039 AOX1Q06278 1338 aa17.24■□□□□ 0.35
SMPD4-215ENST00000457039 TTC41PQ6P2S7 1318 aa17.24■□□□□ 0.35
SMPD4-215ENST00000457039 IGSF3O75054 1194 aa17.24■□□□□ 0.35
SMPD4-215ENST00000457039 DLGAP5Q15398 846 aa17.24■□□□□ 0.35
SMPD4-215ENST00000457039 HHIPL2Q6UWX4 724 aa17.24■□□□□ 0.35
SMPD4-215ENST00000457039 ERICH6Q7L0X2 663 aa17.24■□□□□ 0.35
SMPD4-215ENST00000457039 TEKT1Q969V4 418 aa17.24■□□□□ 0.35
SMPD4-215ENST00000457039 PRMT6Q96LA8 375 aaPredicted RBP17.24■□□□□ 0.35
SMPD4-215ENST00000457039 HAUS7Q99871 368 aa17.24■□□□□ 0.35
SMPD4-215ENST00000457039 ANTXR1Q9H6X2 564 aa17.24■□□□□ 0.35
SMPD4-215ENST00000457039 PIH1D3Q9NQM4 214 aaKnown RBP17.24■□□□□ 0.35
SMPD4-215ENST00000457039 ZBTB47Q9UFB7 747 aaPredicted RBP17.24■□□□□ 0.35
SMPD4-215ENST00000457039 CLEC11AQ9Y240 323 aa17.24■□□□□ 0.35
SMPD4-215ENST00000457039 MX1P20591 662 aa17.23■□□□□ 0.35
SMPD4-215ENST00000457039 FSTL1Q12841 308 aa17.23■□□□□ 0.35
SMPD4-215ENST00000457039 DIXDC1Q155Q3 683 aa17.23■□□□□ 0.35
SMPD4-215ENST00000457039 TSHZ3Q63HK5 1081 aa17.23■□□□□ 0.35
SMPD4-215ENST00000457039 MAP1SQ66K74 1059 aaPredicted RBP17.23■□□□□ 0.35
SMPD4-215ENST00000457039 PI4K2BQ8TCG2 481 aa17.23■□□□□ 0.35
SMPD4-215ENST00000457039 NSUN4Q96CB9 384 aaKnown RBP17.23■□□□□ 0.35
SMPD4-215ENST00000457039 GPATCH3Q96I76 525 aa17.23■□□□□ 0.35
SMPD4-215ENST00000457039 ZDHHC15Q96MV8 337 aa17.23■□□□□ 0.35
SMPD4-215ENST00000457039 BOLA2Q9H3K6 86 aa17.23■□□□□ 0.35
SMPD4-215ENST00000457039 STAP2Q9UGK3 403 aa17.23■□□□□ 0.35
SMPD4-215ENST00000457039 GAKO14976 1311 aa17.22■□□□□ 0.35
SMPD4-215ENST00000457039 DOCK2Q92608 1830 aa17.22■□□□□ 0.35
SMPD4-215ENST00000457039 MECOMQ03112 1051 aa17.22■□□□□ 0.35
SMPD4-215ENST00000457039 ERICH6BQ5W0A0 696 aa17.22■□□□□ 0.35
SMPD4-215ENST00000457039 APOBEC3HQ6NTF7 200 aaKnown RBP17.22■□□□□ 0.35
SMPD4-215ENST00000457039 DZIP1Q86YF9 867 aaKnown RBP17.22■□□□□ 0.35
SMPD4-215ENST00000457039 FAM163AQ96GL9 167 aaPredicted RBP17.22■□□□□ 0.35
SMPD4-215ENST00000457039 GGA3Q9NZ52 723 aa17.22■□□□□ 0.35
SMPD4-215ENST00000457039 DAGLAQ9Y4D2 1042 aa17.22■□□□□ 0.35
SMPD4-215ENST00000457039 PITPNM2Q9BZ72 1349 aa17.21■□□□□ 0.35
SMPD4-215ENST00000457039 MAST2Q6P0Q8 1798 aa17.21■□□□□ 0.35
SMPD4-215ENST00000457039 ITGBL1O95965 494 aaPredicted RBP17.21■□□□□ 0.35
SMPD4-215ENST00000457039 RBM5P52756 815 aaKnown RBP eCLIP17.21■□□□□ 0.35
SMPD4-215ENST00000457039 ANGEL2Q5VTE6 544 aaKnown RBP17.21■□□□□ 0.35
SMPD4-215ENST00000457039 CNTROBQ8N137 903 aa17.21■□□□□ 0.35
SMPD4-215ENST00000457039 EDC3Q96F86 508 aaKnown RBP17.21■□□□□ 0.35
SMPD4-215ENST00000457039 DNAJC2Q99543 621 aaKnown RBP17.21■□□□□ 0.35
SMPD4-215ENST00000457039 RAI14Q9P0K7 980 aa17.21■□□□□ 0.35
SMPD4-215ENST00000457039 LRP2BPQ9P2M1 347 aa17.21■□□□□ 0.35
SMPD4-215ENST00000457039 MYO5AQ9Y4I1 1855 aaKnown RBP17.2■□□□□ 0.34
SMPD4-215ENST00000457039 ECM29Q5VYK3 1845 aa17.2■□□□□ 0.34
SMPD4-215ENST00000457039 GOLIM4O00461 696 aa17.2■□□□□ 0.34
SMPD4-215ENST00000457039 PDE1AP54750 535 aa17.2■□□□□ 0.34
SMPD4-215ENST00000457039 TTF1Q15361 905 aaPredicted RBP17.2■□□□□ 0.34
SMPD4-215ENST00000457039 PAG1Q9NWQ8 432 aa17.2■□□□□ 0.34
SMPD4-215ENST00000457039 MROH7-TTC4A0A0A0MT08 1334 aa17.2■□□□□ 0.34
SMPD4-215ENST00000457039 PASKQ96RG2 1323 aa17.2■□□□□ 0.34
SMPD4-215ENST00000457039 GLRX3O76003 335 aaKnown RBP17.19■□□□□ 0.34
SMPD4-215ENST00000457039 SPDYE2Q495Y8 402 aa17.19■□□□□ 0.34
SMPD4-215ENST00000457039 DCPSQ96C86 337 aaKnown RBP17.19■□□□□ 0.34
SMPD4-215ENST00000457039 TDRD3Q9H7E2 651 aaKnown RBP17.19■□□□□ 0.34
SMPD4-215ENST00000457039 MYH2Q9UKX2 1941 aa17.19■□□□□ 0.34
SMPD4-215ENST00000457039 GPR75-ASB3A0A0A6YYF3 556 aa17.18■□□□□ 0.34
SMPD4-215ENST00000457039 CLRN2A0PK11 232 aa17.18■□□□□ 0.34
SMPD4-215ENST00000457039 ERC2O15083 957 aa17.18■□□□□ 0.34
SMPD4-215ENST00000457039 MYO1BO43795 1136 aa17.18■□□□□ 0.34
SMPD4-215ENST00000457039 IDH1O75874 414 aaKnown RBP17.18■□□□□ 0.34
SMPD4-215ENST00000457039 PDE4AP27815 886 aa17.18■□□□□ 0.34
SMPD4-215ENST00000457039 C1QTNF8P60827 252 aa17.18■□□□□ 0.34
SMPD4-215ENST00000457039 GSTO1P78417 241 aa17.18■□□□□ 0.34
SMPD4-215ENST00000457039 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
SMPD4-215ENST00000457039 CDC37L1Q7L3B6 337 aa17.18■□□□□ 0.34
SMPD4-215ENST00000457039 PLEKHM2Q8IWE5 1019 aa17.18■□□□□ 0.34
SMPD4-215ENST00000457039 SLF2Q8IX21 1173 aa17.18■□□□□ 0.34
SMPD4-215ENST00000457039 GLIS2Q9BZE0 524 aaPredicted RBP17.18■□□□□ 0.34
SMPD4-215ENST00000457039 OSBPL3Q9H4L5 887 aa17.18■□□□□ 0.34
SMPD4-215ENST00000457039 ZNF70Q9UC06 446 aaPredicted RBP17.18■□□□□ 0.34
SMPD4-215ENST00000457039 LDHCP07864 332 aa17.17■□□□□ 0.34
SMPD4-215ENST00000457039 MAP3K12Q12852 859 aa17.17■□□□□ 0.34
SMPD4-215ENST00000457039 NAA16Q6N069 864 aaPredicted RBP17.17■□□□□ 0.34
SMPD4-215ENST00000457039 CDC42EP5Q6NZY7 148 aa17.17■□□□□ 0.34
SMPD4-215ENST00000457039 TMED8Q6PL24 325 aaPredicted RBP17.17■□□□□ 0.34
SMPD4-215ENST00000457039 KRT26Q7Z3Y9 468 aa17.17■□□□□ 0.34
SMPD4-215ENST00000457039 ADGRA1Q86SQ6 560 aa17.17■□□□□ 0.34
SMPD4-215ENST00000457039 USP48Q86UV5 1035 aa17.17■□□□□ 0.34
SMPD4-215ENST00000457039 SCAF8Q9UPN6 1271 aaKnown RBP17.17■□□□□ 0.34
SMPD4-215ENST00000457039 POLR2AP24928 1970 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms