RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 LBX1P52954 281 aa21.44■■□□□ 1.02
USP39-208ENST00000455732 GRIK5Q16478 980 aa21.44■■□□□ 1.02
USP39-208ENST00000455732 C20orf194Q5TEA3 1177 aa21.44■■□□□ 1.02
USP39-208ENST00000455732 GNL3LQ9NVN8 582 aaKnown RBP21.44■■□□□ 1.02
USP39-208ENST00000455732 SERPINA10Q9UK55 444 aa21.44■■□□□ 1.02
USP39-208ENST00000455732 AOX1Q06278 1338 aa21.44■■□□□ 1.02
USP39-208ENST00000455732 COL1A1P02452 1464 aaPredicted RBP21.44■■□□□ 1.02
USP39-208ENST00000455732 SEMA3EO15041 775 aa21.43■■□□□ 1.02
USP39-208ENST00000455732 CHAF1AQ13111 956 aaPredicted RBP21.43■■□□□ 1.02
USP39-208ENST00000455732 SUGT1Q9Y2Z0 365 aa21.43■■□□□ 1.02
USP39-208ENST00000455732 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.43■■□□□ 1.02
USP39-208ENST00000455732 ADORA1P30542 326 aa21.42■■□□□ 1.02
USP39-208ENST00000455732 NOGQ13253 232 aa21.42■■□□□ 1.02
USP39-208ENST00000455732 ZIC5Q96T25 663 aa21.42■■□□□ 1.02
USP39-208ENST00000455732 BEGAINQ9BUH8 593 aa21.42■■□□□ 1.02
USP39-208ENST00000455732 GPR108Q9NPR9 543 aa21.42■■□□□ 1.02
USP39-208ENST00000455732 MYO1BO43795 1136 aa21.41■■□□□ 1.02
USP39-208ENST00000455732 SURF6O75683 361 aaKnown RBP21.41■■□□□ 1.02
USP39-208ENST00000455732 HSPA8P11142 646 aaKnown RBP21.41■■□□□ 1.02
USP39-208ENST00000455732 PHKA1P46020 1223 aa21.41■■□□□ 1.02
USP39-208ENST00000455732 RBM5P52756 815 aaKnown RBP eCLIP21.41■■□□□ 1.02
USP39-208ENST00000455732 TIMM10P62072 90 aa21.41■■□□□ 1.02
USP39-208ENST00000455732 CCDC102BQ68D86 513 aa21.41■■□□□ 1.02
USP39-208ENST00000455732 RPAP2Q8IXW5 612 aaPredicted RBP21.41■■□□□ 1.02
USP39-208ENST00000455732 WDR66Q8TBY9 1149 aa21.41■■□□□ 1.02
USP39-208ENST00000455732 CCDC102AQ96A19 550 aa21.41■■□□□ 1.02
USP39-208ENST00000455732 XAGE2Q96GT9 111 aa21.41■■□□□ 1.02
USP39-208ENST00000455732 DEFB129Q9H1M3 183 aa21.41■■□□□ 1.02
USP39-208ENST00000455732 AKAP11Q9UKA4 1901 aa21.41■■□□□ 1.02
USP39-208ENST00000455732 PDS5AQ29RF7 1337 aaKnown RBP21.4■■□□□ 1.02
USP39-208ENST00000455732 CLRN2A0PK11 232 aa21.4■■□□□ 1.02
USP39-208ENST00000455732 ZNF157P51786 506 aaPredicted RBP21.4■■□□□ 1.02
USP39-208ENST00000455732 HDLBPQ00341 1268 aaKnown RBP21.4■■□□□ 1.02
USP39-208ENST00000455732 MOB2Q70IA6 237 aa21.4■■□□□ 1.02
USP39-208ENST00000455732 DENND2AQ9ULE3 1009 aa21.4■■□□□ 1.02
USP39-208ENST00000455732 SALL1Q9NSC2 1324 aa21.39■■□□□ 1.01
USP39-208ENST00000455732 SLC10A3P09131 477 aa21.39■■□□□ 1.01
USP39-208ENST00000455732 CRKP46108 304 aa21.39■■□□□ 1.01
USP39-208ENST00000455732 SPDYE2Q495Y8 402 aa21.39■■□□□ 1.01
USP39-208ENST00000455732 MAST3O60307 1309 aa21.38■■□□□ 1.01
USP39-208ENST00000455732 NF2P35240 595 aa21.38■■□□□ 1.01
USP39-208ENST00000455732 OS9Q13438 667 aaPredicted RBP21.38■■□□□ 1.01
USP39-208ENST00000455732 MRIQ9BWK5 157 aa21.38■■□□□ 1.01
USP39-208ENST00000455732 PPP2R3BQ9Y5P8 575 aa21.38■■□□□ 1.01
USP39-208ENST00000455732 SSC5DA1L4H1 1573 aa21.38■■□□□ 1.01
USP39-208ENST00000455732 UBE2Q2LH0YL09 131 aa21.37■■□□□ 1.01
USP39-208ENST00000455732 RRP1P56182 461 aaKnown RBP21.37■■□□□ 1.01
USP39-208ENST00000455732 TNNI3KQ59H18 835 aa21.37■■□□□ 1.01
USP39-208ENST00000455732 RASAL3Q86YV0 1011 aa21.37■■□□□ 1.01
USP39-208ENST00000455732 TDRD3Q9H7E2 651 aaKnown RBP21.37■■□□□ 1.01
USP39-208ENST00000455732 VEZTQ9HBM0 779 aa21.37■■□□□ 1.01
USP39-208ENST00000455732 ZNF70Q9UC06 446 aaPredicted RBP21.37■■□□□ 1.01
USP39-208ENST00000455732 FPGT-TNNI3KV9GXZ4 949 aa21.37■■□□□ 1.01
USP39-208ENST00000455732 HMMRO75330 724 aa21.36■■□□□ 1.01
USP39-208ENST00000455732 RASGRF1Q13972 1273 aa21.36■■□□□ 1.01
USP39-208ENST00000455732 HSP90AB4PQ58FF6 505 aa21.36■■□□□ 1.01
USP39-208ENST00000455732 SIRT2Q8IXJ6 389 aa21.36■■□□□ 1.01
USP39-208ENST00000455732 NEUROD6Q96NK8 337 aa21.36■■□□□ 1.01
USP39-208ENST00000455732 KIF23Q02241 960 aaPredicted RBP21.35■■□□□ 1.01
USP39-208ENST00000455732 TTLL12Q14166 644 aaPredicted RBP21.35■■□□□ 1.01
USP39-208ENST00000455732 ERC1Q8IUD2 1116 aa21.35■■□□□ 1.01
USP39-208ENST00000455732 TEKT1Q969V4 418 aa21.35■■□□□ 1.01
USP39-208ENST00000455732 MYH2Q9UKX2 1941 aa21.35■■□□□ 1.01
USP39-208ENST00000455732 CASP8AP2Q9UKL3 1982 aa21.34■■□□□ 1.01
USP39-208ENST00000455732 ARID4AP29374 1257 aaPredicted RBP21.34■■□□□ 1.01
USP39-208ENST00000455732 RASA3Q14644 834 aa21.34■■□□□ 1.01
USP39-208ENST00000455732 ZGPATQ8N5A5 531 aaKnown RBP21.34■■□□□ 1.01
USP39-208ENST00000455732 ZDHHC15Q96MV8 337 aa21.34■■□□□ 1.01
USP39-208ENST00000455732 CA12O43570 354 aa21.33■■□□□ 1.01
USP39-208ENST00000455732 TNFAIP1Q13829 316 aa21.33■■□□□ 1.01
USP39-208ENST00000455732 PRKG1Q13976 671 aa21.33■■□□□ 1.01
USP39-208ENST00000455732 MAP3K11Q16584 847 aa21.33■■□□□ 1.01
USP39-208ENST00000455732 LDLRAD1Q5T700 205 aa21.33■■□□□ 1.01
USP39-208ENST00000455732 GORABQ5T7V8 394 aa21.33■■□□□ 1.01
USP39-208ENST00000455732 APOBEC3HQ6NTF7 200 aaKnown RBP21.33■■□□□ 1.01
USP39-208ENST00000455732 HHIPL2Q6UWX4 724 aa21.33■■□□□ 1.01
USP39-208ENST00000455732 ARMC9Q7Z3E5 817 aa21.33■■□□□ 1.01
USP39-208ENST00000455732 FZD1Q9UP38 647 aa21.33■■□□□ 1.01
USP39-208ENST00000455732 EXOC6BQ9Y2D4 811 aa21.33■■□□□ 1.01
USP39-208ENST00000455732 OTOFQ9HC10 1997 aa21.33■■□□□ 1.01
USP39-208ENST00000455732 LAMB1P07942 1786 aa21.33■■□□□ 1
USP39-208ENST00000455732 PRDX5P30044 214 aa21.32■■□□□ 1
USP39-208ENST00000455732 NBPF12Q5TAG4 269 aaPredicted RBP21.32■■□□□ 1
USP39-208ENST00000455732 ANGEL1Q9UNK9 670 aaKnown RBP21.32■■□□□ 1
USP39-208ENST00000455732 LDHBP07195 334 aaKnown RBP21.31■■□□□ 1
USP39-208ENST00000455732 UQCRFS1P1P0C7P4 283 aa21.31■■□□□ 1
USP39-208ENST00000455732 SUPT20HL1Q3ZLR7 823 aa21.31■■□□□ 1
USP39-208ENST00000455732 TEPSINQ96N21 525 aa21.31■■□□□ 1
USP39-208ENST00000455732 CSRNP1Q96S65 589 aa21.31■■□□□ 1
USP39-208ENST00000455732 TSKSQ9UJT2 592 aa21.31■■□□□ 1
USP39-208ENST00000455732 ZNF512BQ96KM6 892 aaPredicted RBP21.3■■□□□ 1
USP39-208ENST00000455732 DBNDD2Q9BQY9 259 aa21.3■■□□□ 1
USP39-208ENST00000455732 HMG20BQ9P0W2 317 aa21.3■■□□□ 1
USP39-208ENST00000455732 TCP10L2B9ZVM9 353 aa21.29■■□□□ 1
USP39-208ENST00000455732 PPP1R12BO60237 982 aaPredicted RBP21.29■■□□□ 1
USP39-208ENST00000455732 CDAN1Q8IWY9 1227 aa21.29■■□□□ 1
USP39-208ENST00000455732 SPATA5Q8NB90 893 aa21.29■■□□□ 1
USP39-208ENST00000455732 EAF2Q96CJ1 260 aaPredicted RBP21.29■■□□□ 1
USP39-208ENST00000455732 DBNLQ9UJU6 430 aaKnown RBP21.29■■□□□ 1
USP39-208ENST00000455732 RAB11FIP3O75154 756 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms