RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 PUM3Q15397 648 aaKnown RBP11.84□□□□□ -0.51
CTC1-202ENST00000449476 ME3Q16798 604 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 BEND3Q5T5X7 828 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 CTAGE6Q86UF2 777 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 CTAGE4Q8IX94 777 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 SRRTQ9BXP5 876 aaKnown RBP11.84□□□□□ -0.51
CTC1-202ENST00000449476 MYOM2P54296 1465 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 FAM135BQ49AJ0 1406 aa11.84□□□□□ -0.51
CTC1-202ENST00000449476 PICALMQ13492 652 aa11.83□□□□□ -0.51
CTC1-202ENST00000449476 TTC37Q6PGP7 1564 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 ANKRD62A6NC57 917 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 PTH1RQ03431 593 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 SPECC1Q5M775 1068 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 STXBP4Q6ZWJ1 553 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 ZNF804AQ7Z570 1209 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 DNAJC10Q8IXB1 793 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 CCDC113Q9H0I3 377 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 CALCOCO1Q9P1Z2 691 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 JAG2Q9Y219 1238 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 IBTKQ9P2D0 1353 aaPredicted RBP11.83□□□□□ -0.52
CTC1-202ENST00000449476 PDE8AO60658 829 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 TBCAO75347 108 aaKnown RBP11.83□□□□□ -0.52
CTC1-202ENST00000449476 SYT10Q6XYQ8 523 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 ERMNQ8TAM6 284 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 ARMT1Q9H993 441 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 CBX8Q9HC52 389 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 SSH2Q76I76 1423 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 CTR9Q6PD62 1173 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 SYCP3Q8IZU3 236 aa11.83□□□□□ -0.52
CTC1-202ENST00000449476 PRPF4BQ13523 1007 aaKnown RBP11.82□□□□□ -0.52
CTC1-202ENST00000449476 DTHD1Q6ZMT9 781 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 METP08581 1390 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 A0A0D9SFI3 127 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 MMRN2Q9H8L6 949 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 VWA3AA6NCI4 1184 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 LDHBP07195 334 aaKnown RBP11.82□□□□□ -0.52
CTC1-202ENST00000449476 ZAP70P43403 619 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 KARSQ15046 597 aaKnown RBP11.82□□□□□ -0.52
CTC1-202ENST00000449476 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.82□□□□□ -0.52
CTC1-202ENST00000449476 DYDC1Q8WWB3 177 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 RTCBQ9Y3I0 505 aaKnown RBP11.82□□□□□ -0.52
CTC1-202ENST00000449476 SAMM50Q9Y512 469 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 DEXIO95424 95 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 LMAN1P49257 510 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 MCM6Q14566 821 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 PARP10Q53GL7 1025 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 DIS3L2Q8IYB7 885 aaKnown RBP11.82□□□□□ -0.52
CTC1-202ENST00000449476 DRC1Q96MC2 740 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 GOPCQ9HD26 462 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 LZTFL1Q9NQ48 299 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 KCNH3Q9ULD8 1083 aa11.82□□□□□ -0.52
CTC1-202ENST00000449476 MACROD2A1Z1Q3 448 aa11.81□□□□□ -0.52
CTC1-202ENST00000449476 CKAP4Q07065 602 aaKnown RBP11.81□□□□□ -0.52
CTC1-202ENST00000449476 ZNF174Q15697 407 aa11.81□□□□□ -0.52
CTC1-202ENST00000449476 KRT79Q5XKE5 535 aa11.81□□□□□ -0.52
CTC1-202ENST00000449476 TRERF1Q96PN7 1200 aa11.81□□□□□ -0.52
CTC1-202ENST00000449476 ANKRD2Q9GZV1 360 aa11.81□□□□□ -0.52
CTC1-202ENST00000449476 BCCIPQ9P287 314 aaKnown RBP eCLIP11.81□□□□□ -0.52
CTC1-202ENST00000449476 ZHX1Q9UKY1 873 aaPredicted RBP11.81□□□□□ -0.52
CTC1-202ENST00000449476 DENND2AQ9ULE3 1009 aa11.81□□□□□ -0.52
CTC1-202ENST00000449476 GSTTP1A0A1W2PQM5 241 aa11.81□□□□□ -0.52
CTC1-202ENST00000449476 RRP36Q96EU6 259 aaKnown RBP11.81□□□□□ -0.52
CTC1-202ENST00000449476 RBM28Q9NW13 759 aaKnown RBP11.81□□□□□ -0.52
CTC1-202ENST00000449476 CTAGE9A4FU28 777 aa11.81□□□□□ -0.52
CTC1-202ENST00000449476 E7EWF7 191 aa11.81□□□□□ -0.52
CTC1-202ENST00000449476 PLCG2P16885 1265 aa11.81□□□□□ -0.52
CTC1-202ENST00000449476 GNA11P29992 359 aa11.81□□□□□ -0.52
CTC1-202ENST00000449476 DDX17Q92841 729 aaKnown RBP11.81□□□□□ -0.52
CTC1-202ENST00000449476 ZC3H12CQ9C0D7 883 aaKnown RBP11.81□□□□□ -0.52
CTC1-202ENST00000449476 PRDM15P57071 1507 aaPredicted RBP11.81□□□□□ -0.52
CTC1-202ENST00000449476 PRDM1O75626 825 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 DESP17661 470 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 TNNI2P48788 182 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 PPP4R3AQ6IN85 833 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 LPIN2Q92539 896 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 PLIN2Q99541 437 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 DSCC1Q9BVC3 393 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 STAP2Q9UGK3 403 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 TAF5LO75529 589 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 ZNF853P0CG23 659 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 ZNF75DP51815 510 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 UBXN1Q04323 297 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 C8orf37Q96NL8 207 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 MYL10Q9BUA6 226 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 KDRP35968 1356 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 ZNF202O95125 648 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 KIF5AQ12840 1032 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 C17orf53Q8N3J3 647 aaPredicted RBP11.8□□□□□ -0.52
CTC1-202ENST00000449476 PAF1Q8N7H5 531 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 CTNNBL1Q8WYA6 563 aaPredicted RBP11.8□□□□□ -0.52
CTC1-202ENST00000449476 PHKBQ93100 1093 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 GTF3C6Q969F1 213 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 CCDC42Q96M95 316 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 OSBPL3Q9H4L5 887 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 KRT86O43790 486 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 KRT83P78385 493 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 ZSWIM6Q9HCJ5 1215 aa11.8□□□□□ -0.52
CTC1-202ENST00000449476 V9GY48 417 aaPredicted RBP11.8□□□□□ -0.52
CTC1-202ENST00000449476 TACC1O75410 805 aa11.79□□□□□ -0.52
CTC1-202ENST00000449476 GBP2P32456 591 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms