RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 DZIP1Q86YF9 867 aaKnown RBP21.79■■□□□ 1.08
TRAPPC4-203ENST00000447216 AGBL3Q8NEM8 1001 aa21.79■■□□□ 1.08
TRAPPC4-203ENST00000447216 ZNF384Q8TF68 577 aa21.79■■□□□ 1.08
TRAPPC4-203ENST00000447216 TTF2Q9UNY4 1162 aaKnown RBP21.79■■□□□ 1.08
TRAPPC4-203ENST00000447216 MYO3BQ8WXR4 1341 aa21.79■■□□□ 1.08
TRAPPC4-203ENST00000447216 ZC3H4Q9UPT8 1303 aaKnown RBP21.79■■□□□ 1.08
TRAPPC4-203ENST00000447216 MAP3K12Q12852 859 aa21.78■■□□□ 1.08
TRAPPC4-203ENST00000447216 GPC2Q8N158 579 aa21.78■■□□□ 1.08
TRAPPC4-203ENST00000447216 MAGEB6Q8N7X4 407 aa21.78■■□□□ 1.08
TRAPPC4-203ENST00000447216 PDE6AP16499 860 aa21.77■■□□□ 1.08
TRAPPC4-203ENST00000447216 DIXDC1Q155Q3 683 aa21.77■■□□□ 1.08
TRAPPC4-203ENST00000447216 SLC9C2Q5TAH2 1124 aa21.77■■□□□ 1.08
TRAPPC4-203ENST00000447216 NSUN4Q96CB9 384 aaKnown RBP21.77■■□□□ 1.08
TRAPPC4-203ENST00000447216 SUGT1Q9Y2Z0 365 aa21.77■■□□□ 1.08
TRAPPC4-203ENST00000447216 NAA16Q6N069 864 aaPredicted RBP21.76■■□□□ 1.07
TRAPPC4-203ENST00000447216 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.76■■□□□ 1.07
TRAPPC4-203ENST00000447216 CYP7A1P22680 504 aa21.75■■□□□ 1.07
TRAPPC4-203ENST00000447216 RPS12P25398 132 aaKnown RBP21.75■■□□□ 1.07
TRAPPC4-203ENST00000447216 ADD2P35612 726 aa21.75■■□□□ 1.07
TRAPPC4-203ENST00000447216 DPY19L2Q6NUT2 758 aa21.75■■□□□ 1.07
TRAPPC4-203ENST00000447216 ZNF532Q9HCE3 1301 aa21.75■■□□□ 1.07
TRAPPC4-203ENST00000447216 ECM29Q5VYK3 1845 aa21.74■■□□□ 1.07
TRAPPC4-203ENST00000447216 TCRBV5S4A2TA0A5A2 114 aa21.74■■□□□ 1.07
TRAPPC4-203ENST00000447216 GLTPD2A6NH11 291 aa21.74■■□□□ 1.07
TRAPPC4-203ENST00000447216 RNF113AO15541 343 aaKnown RBP21.74■■□□□ 1.07
TRAPPC4-203ENST00000447216 USP17L8P0C7I0 530 aa21.74■■□□□ 1.07
TRAPPC4-203ENST00000447216 ZSCAN25Q6NSZ9 544 aa21.74■■□□□ 1.07
TRAPPC4-203ENST00000447216 ADGRA1Q86SQ6 560 aa21.74■■□□□ 1.07
TRAPPC4-203ENST00000447216 MICALL2Q8IY33 904 aa21.74■■□□□ 1.07
TRAPPC4-203ENST00000447216 CNOT7Q9UIV1 285 aaKnown RBP21.74■■□□□ 1.07
TRAPPC4-203ENST00000447216 PCDHAC2Q9Y5I4 1007 aa21.74■■□□□ 1.07
TRAPPC4-203ENST00000447216 CDK5RAP2Q96SN8 1893 aa21.74■■□□□ 1.07
TRAPPC4-203ENST00000447216 MAST3O60307 1309 aa21.74■■□□□ 1.07
TRAPPC4-203ENST00000447216 CRKP46108 304 aa21.73■■□□□ 1.07
TRAPPC4-203ENST00000447216 DPF2Q92785 391 aa21.73■■□□□ 1.07
TRAPPC4-203ENST00000447216 RFX7Q2KHR2 1363 aa21.73■■□□□ 1.07
TRAPPC4-203ENST00000447216 WDR90Q96KV7 1748 aa21.72■■□□□ 1.07
TRAPPC4-203ENST00000447216 SCN4AP35499 1836 aa21.72■■□□□ 1.07
TRAPPC4-203ENST00000447216 GSTO1P78417 241 aa21.72■■□□□ 1.07
TRAPPC4-203ENST00000447216 NMIQ13287 307 aaPredicted RBP21.72■■□□□ 1.07
TRAPPC4-203ENST00000447216 FAM227BQ96M60 508 aa21.72■■□□□ 1.07
TRAPPC4-203ENST00000447216 DIAPH3Q9NSV4 1193 aa21.72■■□□□ 1.07
TRAPPC4-203ENST00000447216 GPRC5DQ9NZD1 345 aa21.72■■□□□ 1.07
TRAPPC4-203ENST00000447216 HDAC9Q9UKV0 1011 aa21.72■■□□□ 1.07
TRAPPC4-203ENST00000447216 DAGLAQ9Y4D2 1042 aa21.72■■□□□ 1.07
TRAPPC4-203ENST00000447216 MROH7-TTC4A0A0A0MT08 1334 aa21.72■■□□□ 1.07
TRAPPC4-203ENST00000447216 A0A0D9SFI3 127 aa21.71■■□□□ 1.07
TRAPPC4-203ENST00000447216 ZFYP08048 801 aaPredicted RBP21.71■■□□□ 1.07
TRAPPC4-203ENST00000447216 CHMLP26374 656 aa21.71■■□□□ 1.07
TRAPPC4-203ENST00000447216 EPS15P42566 896 aa21.71■■□□□ 1.07
TRAPPC4-203ENST00000447216 RBM5P52756 815 aaKnown RBP eCLIP21.71■■□□□ 1.07
TRAPPC4-203ENST00000447216 UBE3CQ15386 1083 aa21.71■■□□□ 1.07
TRAPPC4-203ENST00000447216 LRRFIP1Q32MZ4 808 aaKnown RBP21.71■■□□□ 1.07
TRAPPC4-203ENST00000447216 CFAP100Q494V2 611 aa21.71■■□□□ 1.07
TRAPPC4-203ENST00000447216 OGFOD1Q8N543 542 aa21.71■■□□□ 1.07
TRAPPC4-203ENST00000447216 MIGA1Q8NAN2 632 aa21.71■■□□□ 1.07
TRAPPC4-203ENST00000447216 TEKT1Q969V4 418 aa21.71■■□□□ 1.07
TRAPPC4-203ENST00000447216 SEC62Q99442 399 aaKnown RBP21.71■■□□□ 1.07
TRAPPC4-203ENST00000447216 CDC45O75419 566 aa21.7■■□□□ 1.06
TRAPPC4-203ENST00000447216 LDHCP07864 332 aa21.7■■□□□ 1.06
TRAPPC4-203ENST00000447216 ZNF280AP59817 542 aaPredicted RBP21.7■■□□□ 1.06
TRAPPC4-203ENST00000447216 ZMYM1Q5SVZ6 1142 aa21.7■■□□□ 1.06
TRAPPC4-203ENST00000447216 RBM26Q5T8P6 1007 aaKnown RBP21.7■■□□□ 1.06
TRAPPC4-203ENST00000447216 SLF2Q8IX21 1173 aa21.7■■□□□ 1.06
TRAPPC4-203ENST00000447216 OSBP2Q969R2 916 aa21.7■■□□□ 1.06
TRAPPC4-203ENST00000447216 SERPINA10Q9UK55 444 aa21.7■■□□□ 1.06
TRAPPC4-203ENST00000447216 GAKO14976 1311 aa21.7■■□□□ 1.06
TRAPPC4-203ENST00000447216 POLR2AP24928 1970 aaKnown RBP21.7■■□□□ 1.06
TRAPPC4-203ENST00000447216 M0R2C6 588 aa21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 EGFRP00533 1210 aa21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 LMOD1P29536 600 aaPredicted RBP21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 DYNLL1P63167 89 aaKnown RBP21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 HDLBPQ00341 1268 aaKnown RBP21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 TBC1D10BQ4KMP7 808 aaPredicted RBP21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 HHIPL2Q6UWX4 724 aa21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 CWC27Q6UX04 472 aaKnown RBP21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 SAMD7Q7Z3H4 446 aa21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 APPBP2Q92624 585 aa21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 L3MBTL3Q96JM7 780 aaPredicted RBP21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 PUS7LQ9H0K6 701 aaKnown RBP21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 MYOZ2Q9NPC6 264 aa21.69■■□□□ 1.06
TRAPPC4-203ENST00000447216 H7C1D1 291 aa21.68■■□□□ 1.06
TRAPPC4-203ENST00000447216 HIP1O00291 1037 aa21.68■■□□□ 1.06
TRAPPC4-203ENST00000447216 IGSF3O75054 1194 aa21.68■■□□□ 1.06
TRAPPC4-203ENST00000447216 BTDP43251 543 aa21.68■■□□□ 1.06
TRAPPC4-203ENST00000447216 CCDC129Q6ZRS4 1044 aa21.68■■□□□ 1.06
TRAPPC4-203ENST00000447216 TRPM4Q8TD43 1214 aa21.68■■□□□ 1.06
TRAPPC4-203ENST00000447216 ZNF526Q8TF50 670 aaPredicted RBP21.68■■□□□ 1.06
TRAPPC4-203ENST00000447216 FAM163AQ96GL9 167 aaPredicted RBP21.68■■□□□ 1.06
TRAPPC4-203ENST00000447216 MRIQ9BWK5 157 aa21.68■■□□□ 1.06
TRAPPC4-203ENST00000447216 AATFQ9NY61 560 aaKnown RBP eCLIP21.68■■□□□ 1.06
TRAPPC4-203ENST00000447216 FOCADQ5VW36 1801 aa21.67■■□□□ 1.06
TRAPPC4-203ENST00000447216 DLGAP5Q15398 846 aa21.67■■□□□ 1.06
TRAPPC4-203ENST00000447216 ZDHHC15Q96MV8 337 aa21.67■■□□□ 1.06
TRAPPC4-203ENST00000447216 IL25Q9H293 177 aa21.67■■□□□ 1.06
TRAPPC4-203ENST00000447216 GPR75-ASB3A0A0A6YYF3 556 aa21.66■■□□□ 1.06
TRAPPC4-203ENST00000447216 MAGEB6P1A0A0J9YX57 407 aa21.66■■□□□ 1.06
TRAPPC4-203ENST00000447216 POTECB2RU33 542 aa21.66■■□□□ 1.06
TRAPPC4-203ENST00000447216 MBD4O95243 580 aa21.66■■□□□ 1.06
TRAPPC4-203ENST00000447216 APOBEC3HQ6NTF7 200 aaKnown RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms