RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 PHIPQ8WWQ0 1821 aa8.87□□□□□ -0.99
BRAFP1-201ENST00000445336 PRKG1Q13976 671 aa8.87□□□□□ -0.99
BRAFP1-201ENST00000445336 HFE2Q6ZVN8 426 aa8.87□□□□□ -0.99
BRAFP1-201ENST00000445336 ATOH1Q92858 354 aaPredicted RBP8.87□□□□□ -0.99
BRAFP1-201ENST00000445336 WNT10BO00744 389 aa8.87□□□□□ -0.99
BRAFP1-201ENST00000445336 FLT3LGP49771 235 aa8.87□□□□□ -0.99
BRAFP1-201ENST00000445336 ZDBF2Q9HCK1 2354 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 CEMIPQ8WUJ3 1361 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 KIAA0355O15063 1070 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 FYB1O15117 783 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 RNMTO43148 476 aaKnown RBP8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 MSCO60682 206 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 EPHA10Q5JZY3 1008 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 ASCL5Q7RTU5 278 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 PODNQ7Z5L7 613 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 ERO1BQ86YB8 467 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 SUGP1Q8IWZ8 645 aaKnown RBP8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 ZNF521Q96K83 1311 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 TTC5Q8N0Z6 440 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 PPM1EQ8WY54 764 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 COA7Q96BR5 231 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 UNC80Q8N2C7 3258 aa8.86□□□□□ -0.99
BRAFP1-201ENST00000445336 COL4A6Q14031 1691 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 RTP1P59025 263 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 OGFOD1Q8N543 542 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 GABRQQ9UN88 632 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 USP17L3A6NCW0 530 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 USP17L4A6NCW7 530 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 MAP3K9P80192 1104 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 TFF2Q03403 129 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 KIAA0319Q5VV43 1072 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 USP17L1Q7RTZ2 530 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 PPP1R42Q7Z4L9 355 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 HOOK2Q96ED9 719 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 CD320Q9NPF0 282 aa8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 COL11A1P12107 1806 aaPredicted RBP8.85□□□□□ -0.99
BRAFP1-201ENST00000445336 FBXL6Q8N531 539 aa8.84□□□□□ -0.99
BRAFP1-201ENST00000445336 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.84□□□□□ -0.99
BRAFP1-201ENST00000445336 DNM1LO00429 736 aa8.84□□□□□ -0.99
BRAFP1-201ENST00000445336 XRCC5P13010 732 aaKnown RBP8.84□□□□□ -0.99
BRAFP1-201ENST00000445336 TMEFF1Q8IYR6 380 aa8.84□□□□□ -0.99
BRAFP1-201ENST00000445336 FMNL2Q96PY5 1086 aa8.84□□□□□ -0.99
BRAFP1-201ENST00000445336 SLC12A5Q9H2X9 1139 aa8.84□□□□□ -0.99
BRAFP1-201ENST00000445336 A0A1B0GUL7 405 aa8.83□□□□□ -1
BRAFP1-201ENST00000445336 EDAQ92838 391 aa8.83□□□□□ -1
BRAFP1-201ENST00000445336 BADQ92934 168 aa8.83□□□□□ -1
BRAFP1-201ENST00000445336 RMDN1Q96DB5 314 aa8.83□□□□□ -1
BRAFP1-201ENST00000445336 DEFB129Q9H1M3 183 aa8.83□□□□□ -1
BRAFP1-201ENST00000445336 MTIF3Q9H2K0 278 aaKnown RBP8.83□□□□□ -1
BRAFP1-201ENST00000445336 MTCH2Q9Y6C9 303 aa8.83□□□□□ -1
BRAFP1-201ENST00000445336 HTTP42858 3142 aa8.83□□□□□ -1
BRAFP1-201ENST00000445336 PLXNB2O15031 1838 aa8.83□□□□□ -1
BRAFP1-201ENST00000445336 GALR2O43603 387 aaPredicted RBP8.83□□□□□ -1
BRAFP1-201ENST00000445336 ECM2O94769 699 aaPredicted RBP8.83□□□□□ -1
BRAFP1-201ENST00000445336 NTSR2O95665 410 aa8.83□□□□□ -1
BRAFP1-201ENST00000445336 NKD2Q969F2 451 aaPredicted RBP8.83□□□□□ -1
BRAFP1-201ENST00000445336 DBNDD1Q9H9R9 158 aa8.83□□□□□ -1
BRAFP1-201ENST00000445336 TMC1Q8TDI8 760 aa8.82□□□□□ -1
BRAFP1-201ENST00000445336 FSD1Q9BTV5 496 aa8.82□□□□□ -1
BRAFP1-201ENST00000445336 PBX4Q9BYU1 374 aa8.82□□□□□ -1
BRAFP1-201ENST00000445336 PDLIM7Q9NR12 457 aa8.82□□□□□ -1
BRAFP1-201ENST00000445336 ANKFY1Q9P2R3 1169 aa8.82□□□□□ -1
BRAFP1-201ENST00000445336 CSADQ9Y600 493 aa8.82□□□□□ -1
BRAFP1-201ENST00000445336 NBPF26B4DH59 902 aa8.82□□□□□ -1
BRAFP1-201ENST00000445336 IGFBP4P22692 258 aa8.82□□□□□ -1
BRAFP1-201ENST00000445336 FPGSQ05932 587 aa8.82□□□□□ -1
BRAFP1-201ENST00000445336 PPATQ06203 517 aa8.82□□□□□ -1
BRAFP1-201ENST00000445336 ADSSL1Q8N142 457 aa8.82□□□□□ -1
BRAFP1-201ENST00000445336 CCDC85BQ15834 202 aaPredicted RBP8.82□□□□□ -1
BRAFP1-201ENST00000445336 DDX46Q7L014 1031 aaKnown RBP8.82□□□□□ -1
BRAFP1-201ENST00000445336 ZGPATQ8N5A5 531 aaKnown RBP8.82□□□□□ -1
BRAFP1-201ENST00000445336 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.82□□□□□ -1
BRAFP1-201ENST00000445336 POP1Q99575 1024 aaKnown RBP8.82□□□□□ -1
BRAFP1-201ENST00000445336 SALL1Q9NSC2 1324 aa8.81□□□□□ -1
BRAFP1-201ENST00000445336 MAP2K5Q13163 448 aa8.81□□□□□ -1
BRAFP1-201ENST00000445336 TNFAIP1Q13829 316 aa8.81□□□□□ -1
BRAFP1-201ENST00000445336 GPR161Q8N6U8 529 aaKnown RBP8.81□□□□□ -1
BRAFP1-201ENST00000445336 ELNP15502 786 aa8.81□□□□□ -1
BRAFP1-201ENST00000445336 ZNF34Q8IZ26 560 aa8.81□□□□□ -1
BRAFP1-201ENST00000445336 ZC3H12CQ9C0D7 883 aaKnown RBP8.81□□□□□ -1
BRAFP1-201ENST00000445336 ELP3Q9H9T3 547 aa8.81□□□□□ -1
BRAFP1-201ENST00000445336 CPA4Q9UI42 421 aa8.81□□□□□ -1
BRAFP1-201ENST00000445336 PCDHA11Q9Y5I1 949 aa8.81□□□□□ -1
BRAFP1-201ENST00000445336 TNPO2O14787 897 aaKnown RBP8.8□□□□□ -1
BRAFP1-201ENST00000445336 FKBP1AP62942 108 aaKnown RBP8.8□□□□□ -1
BRAFP1-201ENST00000445336 PPIGQ13427 754 aaKnown RBP eCLIP8.8□□□□□ -1
BRAFP1-201ENST00000445336 PSRC1Q6PGN9 363 aaPredicted RBP8.8□□□□□ -1
BRAFP1-201ENST00000445336 DCDC2CA8MYV0 355 aa8.8□□□□□ -1
BRAFP1-201ENST00000445336 DMWDQ09019 674 aa8.8□□□□□ -1
BRAFP1-201ENST00000445336 EIF4A2Q14240 407 aaKnown RBP8.8□□□□□ -1
BRAFP1-201ENST00000445336 STRIP1Q5VSL9 837 aa8.8□□□□□ -1
BRAFP1-201ENST00000445336 LHX8Q68G74 356 aa8.8□□□□□ -1
BRAFP1-201ENST00000445336 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.8□□□□□ -1
BRAFP1-201ENST00000445336 TACC3Q9Y6A5 838 aa8.8□□□□□ -1
BRAFP1-201ENST00000445336 GBF1Q92538 1859 aa8.79□□□□□ -1
BRAFP1-201ENST00000445336 GRXCR2A6NFK2 248 aa8.79□□□□□ -1
BRAFP1-201ENST00000445336 TMEM8BA6NDV4 472 aa8.79□□□□□ -1
BRAFP1-201ENST00000445336 TMEM221A6NGB7 291 aa8.79□□□□□ -1
BRAFP1-201ENST00000445336 M0R296 226 aa8.79□□□□□ -1
BRAFP1-201ENST00000445336 SLC4A2P04920 1241 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms