RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 GRIK5Q16478 980 aa24.93■■□□□ 1.58
LRCH3-208ENST00000443727 AOX1Q06278 1338 aa24.92■■□□□ 1.58
LRCH3-208ENST00000443727 SUPT20HL1Q3ZLR7 823 aa24.92■■□□□ 1.58
LRCH3-208ENST00000443727 TEKT1Q969V4 418 aa24.92■■□□□ 1.58
LRCH3-208ENST00000443727 TDRD3Q9H7E2 651 aaKnown RBP24.92■■□□□ 1.58
LRCH3-208ENST00000443727 ZNF70Q9UC06 446 aaPredicted RBP24.92■■□□□ 1.58
LRCH3-208ENST00000443727 ANGEL1Q9UNK9 670 aaKnown RBP24.92■■□□□ 1.58
LRCH3-208ENST00000443727 MTX1Q13505 466 aa24.91■■□□□ 1.58
LRCH3-208ENST00000443727 RASA3Q14644 834 aa24.91■■□□□ 1.58
LRCH3-208ENST00000443727 SPDYE2Q495Y8 402 aa24.91■■□□□ 1.58
LRCH3-208ENST00000443727 WDR66Q8TBY9 1149 aa24.91■■□□□ 1.58
LRCH3-208ENST00000443727 SUGT1Q9Y2Z0 365 aa24.91■■□□□ 1.58
LRCH3-208ENST00000443727 MAST3O60307 1309 aa24.9■■□□□ 1.58
LRCH3-208ENST00000443727 PPP1R12BO60237 982 aaPredicted RBP24.9■■□□□ 1.58
LRCH3-208ENST00000443727 HDLBPQ00341 1268 aaKnown RBP24.9■■□□□ 1.58
LRCH3-208ENST00000443727 REM2Q8IYK8 340 aaPredicted RBP24.89■■□□□ 1.58
LRCH3-208ENST00000443727 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.89■■□□□ 1.58
LRCH3-208ENST00000443727 TCP10L2B9ZVM9 353 aa24.88■■□□□ 1.57
LRCH3-208ENST00000443727 TNNI2P48788 182 aa24.88■■□□□ 1.57
LRCH3-208ENST00000443727 ITPRIPQ8IWB1 547 aa24.88■■□□□ 1.57
LRCH3-208ENST00000443727 CSRNP1Q96S65 589 aa24.88■■□□□ 1.57
LRCH3-208ENST00000443727 FZD1Q9UP38 647 aa24.88■■□□□ 1.57
LRCH3-208ENST00000443727 AKAP2Q9Y2D5 859 aa24.88■■□□□ 1.57
LRCH3-208ENST00000443727 ARAP2Q8WZ64 1704 aa24.88■■□□□ 1.57
LRCH3-208ENST00000443727 ECM29Q5VYK3 1845 aa24.87■■□□□ 1.57
LRCH3-208ENST00000443727 TFCP2Q12800 502 aa24.87■■□□□ 1.57
LRCH3-208ENST00000443727 NBPF12Q5TAG4 269 aaPredicted RBP24.87■■□□□ 1.57
LRCH3-208ENST00000443727 SAGE1Q9NXZ1 904 aa24.87■■□□□ 1.57
LRCH3-208ENST00000443727 TMOD2Q9NZR1 351 aa24.87■■□□□ 1.57
LRCH3-208ENST00000443727 TRPA1O75762 1119 aa24.86■■□□□ 1.57
LRCH3-208ENST00000443727 ADORA1P30542 326 aa24.86■■□□□ 1.57
LRCH3-208ENST00000443727 PHKA1P46020 1223 aa24.86■■□□□ 1.57
LRCH3-208ENST00000443727 TIMM10P62072 90 aa24.86■■□□□ 1.57
LRCH3-208ENST00000443727 MKRN3Q13064 507 aaKnown RBP24.86■■□□□ 1.57
LRCH3-208ENST00000443727 G3BP1Q13283 466 aaKnown RBP eCLIP24.86■■□□□ 1.57
LRCH3-208ENST00000443727 MRIQ9BWK5 157 aa24.86■■□□□ 1.57
LRCH3-208ENST00000443727 RNF186Q9NXI6 227 aa24.86■■□□□ 1.57
LRCH3-208ENST00000443727 DENND2AQ9ULE3 1009 aa24.86■■□□□ 1.57
LRCH3-208ENST00000443727 PNMA6EA0A0J9YXQ4 647 aa24.85■■□□□ 1.57
LRCH3-208ENST00000443727 SEMA3EO15041 775 aa24.85■■□□□ 1.57
LRCH3-208ENST00000443727 LDLRAD1Q5T700 205 aa24.85■■□□□ 1.57
LRCH3-208ENST00000443727 SLC10A4Q96EP9 437 aa24.85■■□□□ 1.57
LRCH3-208ENST00000443727 ZDHHC15Q96MV8 337 aa24.85■■□□□ 1.57
LRCH3-208ENST00000443727 IREB2P48200 963 aaKnown RBP24.84■■□□□ 1.57
LRCH3-208ENST00000443727 CCDC102BQ68D86 513 aa24.84■■□□□ 1.57
LRCH3-208ENST00000443727 HHIPL2Q6UWX4 724 aa24.84■■□□□ 1.57
LRCH3-208ENST00000443727 NEUROD6Q96NK8 337 aa24.84■■□□□ 1.57
LRCH3-208ENST00000443727 A0A1B0GUL7 405 aa24.83■■□□□ 1.57
LRCH3-208ENST00000443727 LDHBP07195 334 aaKnown RBP24.83■■□□□ 1.57
LRCH3-208ENST00000443727 GORABQ5T7V8 394 aa24.83■■□□□ 1.57
LRCH3-208ENST00000443727 SSC5DA1L4H1 1573 aa24.82■■□□□ 1.56
LRCH3-208ENST00000443727 RLBP1P12271 317 aa24.82■■□□□ 1.56
LRCH3-208ENST00000443727 CACNB3P54284 484 aa24.82■■□□□ 1.56
LRCH3-208ENST00000443727 OS9Q13438 667 aaPredicted RBP24.82■■□□□ 1.56
LRCH3-208ENST00000443727 MVPQ14764 893 aaKnown RBP24.82■■□□□ 1.56
LRCH3-208ENST00000443727 MAP3K11Q16584 847 aa24.82■■□□□ 1.56
LRCH3-208ENST00000443727 XAGE2Q96GT9 111 aa24.82■■□□□ 1.56
LRCH3-208ENST00000443727 TMEM39BQ9GZU3 492 aa24.82■■□□□ 1.56
LRCH3-208ENST00000443727 C1orf115Q9H7X2 142 aa24.82■■□□□ 1.56
LRCH3-208ENST00000443727 APOBEC3HQ6NTF7 200 aaKnown RBP24.81■■□□□ 1.56
LRCH3-208ENST00000443727 PRDX5P30044 214 aa24.8■■□□□ 1.56
LRCH3-208ENST00000443727 SREBF2Q12772 1141 aa24.8■■□□□ 1.56
LRCH3-208ENST00000443727 SPRYD7Q5W111 196 aa24.8■■□□□ 1.56
LRCH3-208ENST00000443727 ZGPATQ8N5A5 531 aaKnown RBP24.8■■□□□ 1.56
LRCH3-208ENST00000443727 CLMNQ96JQ2 1002 aa24.8■■□□□ 1.56
LRCH3-208ENST00000443727 MYH13Q9UKX3 1938 aa24.8■■□□□ 1.56
LRCH3-208ENST00000443727 UNCXA6NJT0 531 aa24.79■■□□□ 1.56
LRCH3-208ENST00000443727 USP2O75604 605 aaPredicted RBP24.79■■□□□ 1.56
LRCH3-208ENST00000443727 ATP8B2P98198 1209 aa24.79■■□□□ 1.56
LRCH3-208ENST00000443727 DIXDC1Q155Q3 683 aa24.79■■□□□ 1.56
LRCH3-208ENST00000443727 SALL1Q9NSC2 1324 aa24.79■■□□□ 1.56
LRCH3-208ENST00000443727 ZBTB7BO15156 539 aaPredicted RBP24.78■■□□□ 1.56
LRCH3-208ENST00000443727 MS4A1P11836 297 aa24.78■■□□□ 1.56
LRCH3-208ENST00000443727 RASGRF1Q13972 1273 aa24.78■■□□□ 1.56
LRCH3-208ENST00000443727 FKBP1CQ5VVH2 108 aa24.78■■□□□ 1.56
LRCH3-208ENST00000443727 CDAN1Q8IWY9 1227 aa24.78■■□□□ 1.56
LRCH3-208ENST00000443727 ANKRD13AQ8IZ07 590 aa24.78■■□□□ 1.56
LRCH3-208ENST00000443727 TEPSINQ96N21 525 aa24.78■■□□□ 1.56
LRCH3-208ENST00000443727 ABCF2Q9UG63 623 aa24.78■■□□□ 1.56
LRCH3-208ENST00000443727 DAGLAQ9Y4D2 1042 aa24.78■■□□□ 1.56
LRCH3-208ENST00000443727 AKAP11Q9UKA4 1901 aa24.77■■□□□ 1.56
LRCH3-208ENST00000443727 POLA2Q14181 598 aa24.77■■□□□ 1.56
LRCH3-208ENST00000443727 PANK1Q8TE04 598 aa24.77■■□□□ 1.56
LRCH3-208ENST00000443727 SURF6O75683 361 aaKnown RBP24.76■■□□□ 1.55
LRCH3-208ENST00000443727 TM4SF4P48230 202 aa24.76■■□□□ 1.55
LRCH3-208ENST00000443727 SPTY2D1Q68D10 685 aaPredicted RBP24.76■■□□□ 1.55
LRCH3-208ENST00000443727 FAM83AQ86UY5 434 aa24.76■■□□□ 1.55
LRCH3-208ENST00000443727 DZIP1Q86YF9 867 aaKnown RBP24.76■■□□□ 1.55
LRCH3-208ENST00000443727 SSH3Q8TE77 659 aa24.76■■□□□ 1.55
LRCH3-208ENST00000443727 WNK4Q96J92 1243 aa24.76■■□□□ 1.55
LRCH3-208ENST00000443727 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.76■■□□□ 1.55
LRCH3-208ENST00000443727 ZBTB48P10074 688 aaPredicted RBP24.75■■□□□ 1.55
LRCH3-208ENST00000443727 HOOK2Q96ED9 719 aa24.75■■□□□ 1.55
LRCH3-208ENST00000443727 ABHD8Q96I13 439 aa24.75■■□□□ 1.55
LRCH3-208ENST00000443727 PDS5AQ29RF7 1337 aaKnown RBP24.75■■□□□ 1.55
LRCH3-208ENST00000443727 MANSC4A6NHS7 340 aaPredicted RBP24.74■■□□□ 1.55
LRCH3-208ENST00000443727 ZBTB22O15209 634 aa24.74■■□□□ 1.55
LRCH3-208ENST00000443727 SLF2Q8IX21 1173 aa24.74■■□□□ 1.55
LRCH3-208ENST00000443727 ELP3Q9H9T3 547 aa24.74■■□□□ 1.55
LRCH3-208ENST00000443727 CASP8AP2Q9UKL3 1982 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms