RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 TEKT1Q969V4 418 aa26.06■■□□□ 1.76
CDKN3-204ENST00000442975 CCDC102AQ96A19 550 aa26.06■■□□□ 1.76
CDKN3-204ENST00000442975 TDRD3Q9H7E2 651 aaKnown RBP26.06■■□□□ 1.76
CDKN3-204ENST00000442975 MAST3O60307 1309 aa26.06■■□□□ 1.76
CDKN3-204ENST00000442975 POLR2AP24928 1970 aaKnown RBP26.06■■□□□ 1.76
CDKN3-204ENST00000442975 ZBTB7BO15156 539 aaPredicted RBP26.05■■□□□ 1.76
CDKN3-204ENST00000442975 OS9Q13438 667 aaPredicted RBP26.05■■□□□ 1.76
CDKN3-204ENST00000442975 SPDYE2Q495Y8 402 aa26.05■■□□□ 1.76
CDKN3-204ENST00000442975 CCDC102BQ68D86 513 aa26.05■■□□□ 1.76
CDKN3-204ENST00000442975 ZIC5Q96T25 663 aa26.05■■□□□ 1.76
CDKN3-204ENST00000442975 ZNF70Q9UC06 446 aaPredicted RBP26.05■■□□□ 1.76
CDKN3-204ENST00000442975 PPP2R3BQ9Y5P8 575 aa26.05■■□□□ 1.76
CDKN3-204ENST00000442975 FAM155AB1AL88 458 aaPredicted RBP26.04■■□□□ 1.76
CDKN3-204ENST00000442975 SLC10A3P09131 477 aa26.04■■□□□ 1.76
CDKN3-204ENST00000442975 NEUROD6Q96NK8 337 aa26.04■■□□□ 1.76
CDKN3-204ENST00000442975 SUGT1Q9Y2Z0 365 aa26.04■■□□□ 1.76
CDKN3-204ENST00000442975 MS4A1P11836 297 aa26.03■■□□□ 1.76
CDKN3-204ENST00000442975 TNFAIP1Q13829 316 aa26.03■■□□□ 1.76
CDKN3-204ENST00000442975 RASA3Q14644 834 aa26.03■■□□□ 1.76
CDKN3-204ENST00000442975 RASAL3Q86YV0 1011 aa26.03■■□□□ 1.76
CDKN3-204ENST00000442975 XAGE2Q96GT9 111 aa26.03■■□□□ 1.76
CDKN3-204ENST00000442975 DENND2AQ9ULE3 1009 aa26.03■■□□□ 1.76
CDKN3-204ENST00000442975 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP26.03■■□□□ 1.76
CDKN3-204ENST00000442975 SEMA3EO15041 775 aa26.02■■□□□ 1.76
CDKN3-204ENST00000442975 HSPA8P11142 646 aaKnown RBP26.02■■□□□ 1.76
CDKN3-204ENST00000442975 LBX1P52954 281 aa26.02■■□□□ 1.76
CDKN3-204ENST00000442975 HDLBPQ00341 1268 aaKnown RBP26.02■■□□□ 1.76
CDKN3-204ENST00000442975 POLA2Q14181 598 aa26.02■■□□□ 1.76
CDKN3-204ENST00000442975 MVPQ14764 893 aaKnown RBP26.02■■□□□ 1.76
CDKN3-204ENST00000442975 ARMC9Q7Z3E5 817 aa26.02■■□□□ 1.76
CDKN3-204ENST00000442975 FZD1Q9UP38 647 aa26.02■■□□□ 1.76
CDKN3-204ENST00000442975 SSC5DA1L4H1 1573 aa26.01■■□□□ 1.75
CDKN3-204ENST00000442975 TCP10L2B9ZVM9 353 aa26.01■■□□□ 1.75
CDKN3-204ENST00000442975 ATP8B2P98198 1209 aa26.01■■□□□ 1.75
CDKN3-204ENST00000442975 GORABQ5T7V8 394 aa26.01■■□□□ 1.75
CDKN3-204ENST00000442975 SSH3Q8TE77 659 aa26.01■■□□□ 1.75
CDKN3-204ENST00000442975 TSKSQ9UJT2 592 aa26.01■■□□□ 1.75
CDKN3-204ENST00000442975 ANGEL1Q9UNK9 670 aaKnown RBP26.01■■□□□ 1.75
CDKN3-204ENST00000442975 SURF6O75683 361 aaKnown RBP26■■□□□ 1.75
CDKN3-204ENST00000442975 PRDX5P30044 214 aa26■■□□□ 1.75
CDKN3-204ENST00000442975 CACNB3P54284 484 aa26■■□□□ 1.75
CDKN3-204ENST00000442975 KIF23Q02241 960 aaPredicted RBP26■■□□□ 1.75
CDKN3-204ENST00000442975 RASGRF1Q13972 1273 aa26■■□□□ 1.75
CDKN3-204ENST00000442975 ZDHHC15Q96MV8 337 aa26■■□□□ 1.75
CDKN3-204ENST00000442975 TMOD2Q9NZR1 351 aa26■■□□□ 1.75
CDKN3-204ENST00000442975 ZBTB4Q9P1Z0 1013 aaPredicted RBP26■■□□□ 1.75
CDKN3-204ENST00000442975 LDHBP07195 334 aaKnown RBP25.99■■□□□ 1.75
CDKN3-204ENST00000442975 SUPT20HL1Q3ZLR7 823 aa25.99■■□□□ 1.75
CDKN3-204ENST00000442975 NBPF12Q5TAG4 269 aaPredicted RBP25.99■■□□□ 1.75
CDKN3-204ENST00000442975 TNS4Q8IZW8 715 aa25.99■■□□□ 1.75
CDKN3-204ENST00000442975 TNNI2P48788 182 aa25.98■■□□□ 1.75
CDKN3-204ENST00000442975 DIXDC1Q155Q3 683 aa25.98■■□□□ 1.75
CDKN3-204ENST00000442975 CEP85Q6P2H3 762 aa25.98■■□□□ 1.75
CDKN3-204ENST00000442975 COG6Q9Y2V7 657 aa25.98■■□□□ 1.75
CDKN3-204ENST00000442975 PPP1R12BO60237 982 aaPredicted RBP25.97■■□□□ 1.75
CDKN3-204ENST00000442975 MKRN3Q13064 507 aaKnown RBP25.97■■□□□ 1.75
CDKN3-204ENST00000442975 TMEM39BQ9GZU3 492 aa25.97■■□□□ 1.75
CDKN3-204ENST00000442975 PRDM10Q9NQV6 1147 aa25.97■■□□□ 1.75
CDKN3-204ENST00000442975 SALL1Q9NSC2 1324 aa25.96■■□□□ 1.75
CDKN3-204ENST00000442975 CA12O43570 354 aa25.96■■□□□ 1.75
CDKN3-204ENST00000442975 APOBEC3HQ6NTF7 200 aaKnown RBP25.96■■□□□ 1.75
CDKN3-204ENST00000442975 HHIPL2Q6UWX4 724 aa25.96■■□□□ 1.75
CDKN3-204ENST00000442975 CDAN1Q8IWY9 1227 aa25.96■■□□□ 1.75
CDKN3-204ENST00000442975 ZGPATQ8N5A5 531 aaKnown RBP25.96■■□□□ 1.75
CDKN3-204ENST00000442975 ABCF2Q9UG63 623 aa25.96■■□□□ 1.75
CDKN3-204ENST00000442975 DZIP1Q86YF9 867 aaKnown RBP25.95■■□□□ 1.74
CDKN3-204ENST00000442975 MRIQ9BWK5 157 aa25.95■■□□□ 1.74
CDKN3-204ENST00000442975 DDX19BQ9UMR2 479 aa25.95■■□□□ 1.74
CDKN3-204ENST00000442975 DAGLAQ9Y4D2 1042 aa25.95■■□□□ 1.74
CDKN3-204ENST00000442975 ECM29Q5VYK3 1845 aa25.95■■□□□ 1.74
CDKN3-204ENST00000442975 TNNI3KQ59H18 835 aa25.94■■□□□ 1.74
CDKN3-204ENST00000442975 FPGT-TNNI3KV9GXZ4 949 aa25.94■■□□□ 1.74
CDKN3-204ENST00000442975 PDS5AQ29RF7 1337 aaKnown RBP25.93■■□□□ 1.74
CDKN3-204ENST00000442975 IREB2P48200 963 aaKnown RBP25.92■■□□□ 1.74
CDKN3-204ENST00000442975 LDLRAD1Q5T700 205 aa25.92■■□□□ 1.74
CDKN3-204ENST00000442975 IFFO2Q5TF58 517 aa25.92■■□□□ 1.74
CDKN3-204ENST00000442975 PI16Q6UXB8 463 aa25.92■■□□□ 1.74
CDKN3-204ENST00000442975 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.92■■□□□ 1.74
CDKN3-204ENST00000442975 YTHDC1Q96MU7 727 aaKnown RBP25.92■■□□□ 1.74
CDKN3-204ENST00000442975 TEPSINQ96N21 525 aa25.92■■□□□ 1.74
CDKN3-204ENST00000442975 MYH13Q9UKX3 1938 aa25.92■■□□□ 1.74
CDKN3-204ENST00000442975 SPATA5Q8NB90 893 aa25.91■■□□□ 1.74
CDKN3-204ENST00000442975 CLMNQ96JQ2 1002 aa25.91■■□□□ 1.74
CDKN3-204ENST00000442975 CSRNP1Q96S65 589 aa25.91■■□□□ 1.74
CDKN3-204ENST00000442975 DBNDD2Q9BQY9 259 aa25.91■■□□□ 1.74
CDKN3-204ENST00000442975 GPR108Q9NPR9 543 aa25.91■■□□□ 1.74
CDKN3-204ENST00000442975 HMG20BQ9P0W2 317 aa25.91■■□□□ 1.74
CDKN3-204ENST00000442975 EXOC6BQ9Y2D4 811 aa25.91■■□□□ 1.74
CDKN3-204ENST00000442975 NOP58Q9Y2X3 529 aaKnown RBP25.91■■□□□ 1.74
CDKN3-204ENST00000442975 ZBTB22O15209 634 aa25.9■■□□□ 1.74
CDKN3-204ENST00000442975 MAP3K11Q16584 847 aa25.9■■□□□ 1.74
CDKN3-204ENST00000442975 TTC39AQ5SRH9 613 aa25.9■■□□□ 1.74
CDKN3-204ENST00000442975 C20orf194Q5TEA3 1177 aa25.9■■□□□ 1.74
CDKN3-204ENST00000442975 UQCRFS1P1P0C7P4 283 aa25.89■■□□□ 1.74
CDKN3-204ENST00000442975 ARID4AP29374 1257 aaPredicted RBP25.89■■□□□ 1.74
CDKN3-204ENST00000442975 SPTY2D1Q68D10 685 aaPredicted RBP25.89■■□□□ 1.74
CDKN3-204ENST00000442975 CDC42EP5Q6NZY7 148 aa25.89■■□□□ 1.74
CDKN3-204ENST00000442975 SLC10A4Q96EP9 437 aa25.89■■□□□ 1.74
CDKN3-204ENST00000442975 FKBP1CQ5VVH2 108 aa25.88■■□□□ 1.73
CDKN3-204ENST00000442975 FAM83AQ86UY5 434 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms