RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 FOXO3O43524 673 aa9.06□□□□□ -0.96
LMO3-208ENST00000441439 SHOX2O60902 331 aaPredicted RBP9.06□□□□□ -0.96
LMO3-208ENST00000441439 URI1O94763 535 aaPredicted RBP9.06□□□□□ -0.96
LMO3-208ENST00000441439 CT47A1Q5JQC4 288 aaPredicted RBP9.06□□□□□ -0.96
LMO3-208ENST00000441439 WDR93Q6P2C0 686 aa9.06□□□□□ -0.96
LMO3-208ENST00000441439 THEMISQ8N1K5 641 aaPredicted RBP9.06□□□□□ -0.96
LMO3-208ENST00000441439 GBP3Q9H0R5 595 aa9.06□□□□□ -0.96
LMO3-208ENST00000441439 AHDC1Q5TGY3 1603 aaPredicted RBP9.06□□□□□ -0.96
LMO3-208ENST00000441439 NAA15Q9BXJ9 866 aaKnown RBP9.06□□□□□ -0.96
LMO3-208ENST00000441439 A0A1B0GUL6 1792 aa9.06□□□□□ -0.96
LMO3-208ENST00000441439 EIF3CLB5ME19 914 aaKnown RBP9.06□□□□□ -0.96
LMO3-208ENST00000441439 CUTAO60888 179 aa9.06□□□□□ -0.96
LMO3-208ENST00000441439 Q6ZUG5 572 aa9.06□□□□□ -0.96
LMO3-208ENST00000441439 IL17REQ8NFR9 667 aa9.06□□□□□ -0.96
LMO3-208ENST00000441439 EIF3CQ99613 913 aaKnown RBP9.06□□□□□ -0.96
LMO3-208ENST00000441439 ZCCHC17Q9NP64 241 aaKnown RBP9.06□□□□□ -0.96
LMO3-208ENST00000441439 A1CFQ9NQ94 594 aaKnown RBP9.06□□□□□ -0.96
LMO3-208ENST00000441439 ACEP12821 1306 aa9.06□□□□□ -0.96
LMO3-208ENST00000441439 MYO5AQ9Y4I1 1855 aaKnown RBP9.06□□□□□ -0.96
LMO3-208ENST00000441439 ZNF609O15014 1411 aa9.06□□□□□ -0.96
LMO3-208ENST00000441439 PPFIA4O75335 1185 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 ERLIN1O75477 346 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 SASH1O94885 1247 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 ATP5JP18859 108 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 NDUFA8P51970 172 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 MYL5Q02045 173 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 HDGFL1Q5TGJ6 251 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 ARHGEF25Q86VW2 580 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 TAF6LQ9Y6J9 622 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 MMS22LQ6ZRQ5 1243 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 DHX32Q7L7V1 743 aaKnown RBP9.05□□□□□ -0.96
LMO3-208ENST00000441439 PANX2Q96RD6 677 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 EYA1Q99502 592 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 BCL9LQ86UU0 1499 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 A0A087WUV0 522 aaPredicted RBP9.05□□□□□ -0.96
LMO3-208ENST00000441439 PTPDC1A2A3K4 754 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 SLC3A2P08195 630 aaKnown RBP9.05□□□□□ -0.96
LMO3-208ENST00000441439 EIF5P55010 431 aaKnown RBP9.05□□□□□ -0.96
LMO3-208ENST00000441439 EIF4A1P60842 406 aaKnown RBP9.05□□□□□ -0.96
LMO3-208ENST00000441439 LRRC31Q6UY01 552 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 WDR24Q96S15 920 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 PHAXQ9H814 394 aaKnown RBP9.05□□□□□ -0.96
LMO3-208ENST00000441439 WDR19Q8NEZ3 1342 aa9.05□□□□□ -0.96
LMO3-208ENST00000441439 PPP6R2O75170 966 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 ZNF18P17022 549 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 LMAN1P49257 510 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 TPRNQ4KMQ1 711 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 MCTP2Q6DN12 878 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 ZNF589Q86UQ0 364 aaPredicted RBP9.04□□□□□ -0.96
LMO3-208ENST00000441439 CTCFLQ8NI51 663 aaPredicted RBP9.04□□□□□ -0.96
LMO3-208ENST00000441439 DSCC1Q9BVC3 393 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 ACBD3Q9H3P7 528 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 C19orf44Q9H6X5 657 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 MYO1AQ9UBC5 1043 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 CDC23Q9UJX2 597 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 C1orf167Q5SNV9 1468 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 CPDO75976 1380 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 COL16A1Q07092 1604 aaPredicted RBP9.04□□□□□ -0.96
LMO3-208ENST00000441439 NT5DC1Q5TFE4 455 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 TC2NQ8N9U0 490 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 ANKRD24Q8TF21 1146 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 EAF2Q96CJ1 260 aaPredicted RBP9.04□□□□□ -0.96
LMO3-208ENST00000441439 INTS13Q9NVM9 706 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 AFDNP55196 1824 aaKnown RBP9.04□□□□□ -0.96
LMO3-208ENST00000441439 KIF1CO43896 1103 aaKnown RBP9.04□□□□□ -0.96
LMO3-208ENST00000441439 UBASH3AP57075 661 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 CCDC91Q7Z6B0 441 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 AACSQ86V21 672 aa9.04□□□□□ -0.96
LMO3-208ENST00000441439 BAG1Q99933 345 aaPredicted RBP9.04□□□□□ -0.96
LMO3-208ENST00000441439 WDR17Q8IZU2 1322 aa9.03□□□□□ -0.96
LMO3-208ENST00000441439 NPHP1O15259 732 aa9.03□□□□□ -0.96
LMO3-208ENST00000441439 PRPF6O94906 941 aaKnown RBP9.03□□□□□ -0.96
LMO3-208ENST00000441439 ZNF202O95125 648 aa9.03□□□□□ -0.96
LMO3-208ENST00000441439 CHMP4BP1P59074 171 aa9.03□□□□□ -0.96
LMO3-208ENST00000441439 AKAP2Q9Y2D5 859 aa9.03□□□□□ -0.96
LMO3-208ENST00000441439 CYP21A2P08686 494 aa9.03□□□□□ -0.96
LMO3-208ENST00000441439 ME1P48163 572 aa9.03□□□□□ -0.96
LMO3-208ENST00000441439 AMPHP49418 695 aa9.03□□□□□ -0.96
LMO3-208ENST00000441439 WHAMMP3Q1A5X7 153 aa9.03□□□□□ -0.96
LMO3-208ENST00000441439 RUBCNQ92622 972 aa9.03□□□□□ -0.96
LMO3-208ENST00000441439 SDF4Q9BRK5 362 aa9.03□□□□□ -0.96
LMO3-208ENST00000441439 ROBO1Q9Y6N7 1651 aa9.03□□□□□ -0.96
LMO3-208ENST00000441439 MYH7P12883 1935 aa9.02□□□□□ -0.96
LMO3-208ENST00000441439 TOP1P11387 765 aaKnown RBP9.02□□□□□ -0.96
LMO3-208ENST00000441439 TADA2BQ86TJ2 420 aa9.02□□□□□ -0.96
LMO3-208ENST00000441439 DHX58Q96C10 678 aa9.02□□□□□ -0.96
LMO3-208ENST00000441439 TRERF1Q96PN7 1200 aa9.02□□□□□ -0.96
LMO3-208ENST00000441439 LRP5O75197 1615 aa9.02□□□□□ -0.97
LMO3-208ENST00000441439 CLGNO14967 610 aa9.02□□□□□ -0.97
LMO3-208ENST00000441439 SPTLC2O15270 562 aa9.02□□□□□ -0.97
LMO3-208ENST00000441439 FDPSP14324 419 aaKnown RBP9.02□□□□□ -0.97
LMO3-208ENST00000441439 GYS2P54840 703 aa9.02□□□□□ -0.97
LMO3-208ENST00000441439 ZRSR1Q15695 479 aaKnown RBP9.02□□□□□ -0.97
LMO3-208ENST00000441439 NBPF6Q5VWK0 638 aa9.02□□□□□ -0.97
LMO3-208ENST00000441439 CCDC34Q96HJ3 373 aa9.02□□□□□ -0.97
LMO3-208ENST00000441439 KAZALD1Q96I82 304 aa9.02□□□□□ -0.97
LMO3-208ENST00000441439 NBPF4Q96M43 638 aa9.02□□□□□ -0.97
LMO3-208ENST00000441439 FSD1Q9BTV5 496 aa9.02□□□□□ -0.97
LMO3-208ENST00000441439 PDE11AQ9HCR9 933 aa9.02□□□□□ -0.97
LMO3-208ENST00000441439 COL14A1Q05707 1796 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms