RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 BCAMP50895 628 aa22.57■■□□□ 1.2
SMPD4-210ENST00000441135 CHAF1AQ13111 956 aaPredicted RBP22.57■■□□□ 1.2
SMPD4-210ENST00000441135 MOB2Q70IA6 237 aa22.57■■□□□ 1.2
SMPD4-210ENST00000441135 ARMC9Q7Z3E5 817 aa22.57■■□□□ 1.2
SMPD4-210ENST00000441135 SSH3Q8TE77 659 aa22.57■■□□□ 1.2
SMPD4-210ENST00000441135 CEP126Q9P2H0 1117 aa22.57■■□□□ 1.2
SMPD4-210ENST00000441135 PA2G4Q9UQ80 394 aaKnown RBP22.57■■□□□ 1.2
SMPD4-210ENST00000441135 PCDHAC2Q9Y5I4 1007 aa22.57■■□□□ 1.2
SMPD4-210ENST00000441135 PNMA6EA0A0J9YXQ4 647 aa22.56■■□□□ 1.2
SMPD4-210ENST00000441135 CLRN2A0PK11 232 aa22.56■■□□□ 1.2
SMPD4-210ENST00000441135 UBE2Q2LH0YL09 131 aa22.56■■□□□ 1.2
SMPD4-210ENST00000441135 TNFAIP1Q13829 316 aa22.56■■□□□ 1.2
SMPD4-210ENST00000441135 VEZTQ9HBM0 779 aa22.56■■□□□ 1.2
SMPD4-210ENST00000441135 SAGE1Q9NXZ1 904 aa22.56■■□□□ 1.2
SMPD4-210ENST00000441135 TSKSQ9UJT2 592 aa22.56■■□□□ 1.2
SMPD4-210ENST00000441135 ECM29Q5VYK3 1845 aa22.55■■□□□ 1.2
SMPD4-210ENST00000441135 ZBTB22O15209 634 aa22.55■■□□□ 1.2
SMPD4-210ENST00000441135 HDLBPQ00341 1268 aaKnown RBP22.55■■□□□ 1.2
SMPD4-210ENST00000441135 ATP2B3Q16720 1220 aa22.55■■□□□ 1.2
SMPD4-210ENST00000441135 COG6Q9Y2V7 657 aa22.55■■□□□ 1.2
SMPD4-210ENST00000441135 SUGT1Q9Y2Z0 365 aa22.55■■□□□ 1.2
SMPD4-210ENST00000441135 CRKP46108 304 aa22.54■■□□□ 1.2
SMPD4-210ENST00000441135 SUPT20HL1Q3ZLR7 823 aa22.54■■□□□ 1.2
SMPD4-210ENST00000441135 SPDYE2Q495Y8 402 aa22.54■■□□□ 1.2
SMPD4-210ENST00000441135 ZBTB40Q9NUA8 1239 aa22.54■■□□□ 1.2
SMPD4-210ENST00000441135 MAST3O60307 1309 aa22.54■■□□□ 1.2
SMPD4-210ENST00000441135 AOX1Q06278 1338 aa22.54■■□□□ 1.2
SMPD4-210ENST00000441135 CEP85Q6P2H3 762 aa22.53■■□□□ 1.2
SMPD4-210ENST00000441135 ZNF70Q9UC06 446 aaPredicted RBP22.53■■□□□ 1.2
SMPD4-210ENST00000441135 PPP1R12BO60237 982 aaPredicted RBP22.52■■□□□ 1.2
SMPD4-210ENST00000441135 WDR66Q8TBY9 1149 aa22.52■■□□□ 1.2
SMPD4-210ENST00000441135 TEKT1Q969V4 418 aa22.52■■□□□ 1.2
SMPD4-210ENST00000441135 CSRNP1Q96S65 589 aa22.52■■□□□ 1.2
SMPD4-210ENST00000441135 C1orf115Q9H7X2 142 aa22.52■■□□□ 1.2
SMPD4-210ENST00000441135 GNL3LQ9NVN8 582 aaKnown RBP22.52■■□□□ 1.2
SMPD4-210ENST00000441135 ANGEL1Q9UNK9 670 aaKnown RBP22.52■■□□□ 1.2
SMPD4-210ENST00000441135 SSC5DA1L4H1 1573 aa22.51■■□□□ 1.19
SMPD4-210ENST00000441135 CAPN15O75808 1086 aa22.51■■□□□ 1.19
SMPD4-210ENST00000441135 RASA3Q14644 834 aa22.51■■□□□ 1.19
SMPD4-210ENST00000441135 GRIK5Q16478 980 aa22.51■■□□□ 1.19
SMPD4-210ENST00000441135 LDLRAD1Q5T700 205 aa22.51■■□□□ 1.19
SMPD4-210ENST00000441135 MRIQ9BWK5 157 aa22.51■■□□□ 1.19
SMPD4-210ENST00000441135 TDRD3Q9H7E2 651 aaKnown RBP22.51■■□□□ 1.19
SMPD4-210ENST00000441135 AKAP2Q9Y2D5 859 aa22.51■■□□□ 1.19
SMPD4-210ENST00000441135 NOP58Q9Y2X3 529 aaKnown RBP22.51■■□□□ 1.19
SMPD4-210ENST00000441135 RRP1P56182 461 aaKnown RBP22.5■■□□□ 1.19
SMPD4-210ENST00000441135 G3BP1Q13283 466 aaKnown RBP eCLIP22.5■■□□□ 1.19
SMPD4-210ENST00000441135 PRKG1Q13976 671 aa22.5■■□□□ 1.19
SMPD4-210ENST00000441135 MAP3K11Q16584 847 aa22.5■■□□□ 1.19
SMPD4-210ENST00000441135 C20orf194Q5TEA3 1177 aa22.5■■□□□ 1.19
SMPD4-210ENST00000441135 RPAP2Q8IXW5 612 aaPredicted RBP22.5■■□□□ 1.19
SMPD4-210ENST00000441135 UNCXA6NJT0 531 aa22.49■■□□□ 1.19
SMPD4-210ENST00000441135 SEMA3EO15041 775 aa22.49■■□□□ 1.19
SMPD4-210ENST00000441135 TNNI2P48788 182 aa22.49■■□□□ 1.19
SMPD4-210ENST00000441135 ZDHHC15Q96MV8 337 aa22.49■■□□□ 1.19
SMPD4-210ENST00000441135 RNF186Q9NXI6 227 aa22.49■■□□□ 1.19
SMPD4-210ENST00000441135 GPR108Q9NPR9 543 aa22.48■■□□□ 1.19
SMPD4-210ENST00000441135 TRPA1O75762 1119 aa22.47■■□□□ 1.19
SMPD4-210ENST00000441135 TFCP2Q12800 502 aa22.47■■□□□ 1.19
SMPD4-210ENST00000441135 NBPF12Q5TAG4 269 aaPredicted RBP22.47■■□□□ 1.19
SMPD4-210ENST00000441135 TMOD2Q9NZR1 351 aa22.47■■□□□ 1.19
SMPD4-210ENST00000441135 HMMRO75330 724 aa22.46■■□□□ 1.19
SMPD4-210ENST00000441135 IREB2P48200 963 aaKnown RBP22.46■■□□□ 1.19
SMPD4-210ENST00000441135 SREBF2Q12772 1141 aa22.46■■□□□ 1.19
SMPD4-210ENST00000441135 HHIPL2Q6UWX4 724 aa22.46■■□□□ 1.19
SMPD4-210ENST00000441135 DENND2AQ9ULE3 1009 aa22.46■■□□□ 1.19
SMPD4-210ENST00000441135 TCP10L2B9ZVM9 353 aa22.45■■□□□ 1.18
SMPD4-210ENST00000441135 SURF6O75683 361 aaKnown RBP22.45■■□□□ 1.18
SMPD4-210ENST00000441135 PHKA1P46020 1223 aa22.45■■□□□ 1.18
SMPD4-210ENST00000441135 SPRYD7Q5W111 196 aa22.45■■□□□ 1.18
SMPD4-210ENST00000441135 SLC10A4Q96EP9 437 aa22.45■■□□□ 1.18
SMPD4-210ENST00000441135 FZD1Q9UP38 647 aa22.45■■□□□ 1.18
SMPD4-210ENST00000441135 SALL1Q9NSC2 1324 aa22.45■■□□□ 1.18
SMPD4-210ENST00000441135 A0A1B0GUL7 405 aa22.44■■□□□ 1.18
SMPD4-210ENST00000441135 HSP90AB4PQ58FF6 505 aa22.44■■□□□ 1.18
SMPD4-210ENST00000441135 FKBP1CQ5VVH2 108 aa22.44■■□□□ 1.18
SMPD4-210ENST00000441135 APOBEC3HQ6NTF7 200 aaKnown RBP22.44■■□□□ 1.18
SMPD4-210ENST00000441135 TEPSINQ96N21 525 aa22.44■■□□□ 1.18
SMPD4-210ENST00000441135 MYH13Q9UKX3 1938 aa22.43■■□□□ 1.18
SMPD4-210ENST00000441135 PDS5AQ29RF7 1337 aaKnown RBP22.43■■□□□ 1.18
SMPD4-210ENST00000441135 ZBTB48P10074 688 aaPredicted RBP22.43■■□□□ 1.18
SMPD4-210ENST00000441135 ADORA1P30542 326 aa22.43■■□□□ 1.18
SMPD4-210ENST00000441135 TM4SF4P48230 202 aa22.43■■□□□ 1.18
SMPD4-210ENST00000441135 MKRN3Q13064 507 aaKnown RBP22.43■■□□□ 1.18
SMPD4-210ENST00000441135 CCDC102BQ68D86 513 aa22.43■■□□□ 1.18
SMPD4-210ENST00000441135 ERC1Q8IUD2 1116 aa22.43■■□□□ 1.18
SMPD4-210ENST00000441135 ZGPATQ8N5A5 531 aaKnown RBP22.43■■□□□ 1.18
SMPD4-210ENST00000441135 ABHD8Q96I13 439 aa22.43■■□□□ 1.18
SMPD4-210ENST00000441135 AKAP11Q9UKA4 1901 aa22.42■■□□□ 1.18
SMPD4-210ENST00000441135 LDHBP07195 334 aaKnown RBP22.42■■□□□ 1.18
SMPD4-210ENST00000441135 OS9Q13438 667 aaPredicted RBP22.42■■□□□ 1.18
SMPD4-210ENST00000441135 FAM83AQ86UY5 434 aa22.42■■□□□ 1.18
SMPD4-210ENST00000441135 ANKRD13AQ8IZ07 590 aa22.42■■□□□ 1.18
SMPD4-210ENST00000441135 TMEM39BQ9GZU3 492 aa22.42■■□□□ 1.18
SMPD4-210ENST00000441135 USP2O75604 605 aaPredicted RBP22.41■■□□□ 1.18
SMPD4-210ENST00000441135 TIMM10P62072 90 aa22.41■■□□□ 1.18
SMPD4-210ENST00000441135 XAGE2Q96GT9 111 aa22.41■■□□□ 1.18
SMPD4-210ENST00000441135 CLMNQ96JQ2 1002 aa22.41■■□□□ 1.18
SMPD4-210ENST00000441135 RPAP1Q9BWH6 1393 aaPredicted RBP22.4■■□□□ 1.18
SMPD4-210ENST00000441135 MANSC4A6NHS7 340 aaPredicted RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms