RNA–Protein interactions for RNA: ENST00000439974.3

ITGB1-207, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-207ENST00000439974 KLHDC4Q8TBB5 520 aa20.04■□□□□ 0.8
ITGB1-207ENST00000439974 UNCXA6NJT0 531 aa20.03■□□□□ 0.8
ITGB1-207ENST00000439974 FRAT2O75474 233 aaPredicted RBP20.03■□□□□ 0.8
ITGB1-207ENST00000439974 TBC1D8O95759 1140 aa20.03■□□□□ 0.8
ITGB1-207ENST00000439974 RASA3Q14644 834 aa20.03■□□□□ 0.8
ITGB1-207ENST00000439974 NBPF12Q5TAG4 269 aaPredicted RBP20.03■□□□□ 0.8
ITGB1-207ENST00000439974 PANK1Q8TE04 598 aa20.03■□□□□ 0.8
ITGB1-207ENST00000439974 TBC1D22AQ8WUA7 517 aa20.03■□□□□ 0.8
ITGB1-207ENST00000439974 SLC10A4Q96EP9 437 aa20.03■□□□□ 0.8
ITGB1-207ENST00000439974 ZNF70Q9UC06 446 aaPredicted RBP20.03■□□□□ 0.8
ITGB1-207ENST00000439974 IQSEC3Q9UPP2 1182 aaPredicted RBP20.03■□□□□ 0.8
ITGB1-207ENST00000439974 LRRFIP2Q9Y608 721 aaKnown RBP20.03■□□□□ 0.8
ITGB1-207ENST00000439974 CRKP46108 304 aa20.02■□□□□ 0.8
ITGB1-207ENST00000439974 CHAF1AQ13111 956 aaPredicted RBP20.02■□□□□ 0.8
ITGB1-207ENST00000439974 PUM3Q15397 648 aaKnown RBP20.02■□□□□ 0.8
ITGB1-207ENST00000439974 FTSJ3Q8IY81 847 aaKnown RBP20.02■□□□□ 0.8
ITGB1-207ENST00000439974 DZIP1LQ8IYY4 767 aaKnown RBP20.02■□□□□ 0.8
ITGB1-207ENST00000439974 TDRD3Q9H7E2 651 aaKnown RBP20.02■□□□□ 0.8
ITGB1-207ENST00000439974 IFIT1P09914 478 aaKnown RBP20.01■□□□□ 0.79
ITGB1-207ENST00000439974 ZBTB48P10074 688 aaPredicted RBP20.01■□□□□ 0.79
ITGB1-207ENST00000439974 IREB2P48200 963 aaKnown RBP20.01■□□□□ 0.79
ITGB1-207ENST00000439974 RFX5P48382 616 aaPredicted RBP20.01■□□□□ 0.79
ITGB1-207ENST00000439974 MLLT1Q03111 559 aaPredicted RBP20.01■□□□□ 0.79
ITGB1-207ENST00000439974 NOM1Q5C9Z4 860 aaKnown RBP20.01■□□□□ 0.79
ITGB1-207ENST00000439974 ZNF296Q8WUU4 475 aaPredicted RBP20.01■□□□□ 0.79
ITGB1-207ENST00000439974 MANSC4A6NHS7 340 aaPredicted RBP20■□□□□ 0.79
ITGB1-207ENST00000439974 EYA2O00167 538 aa20■□□□□ 0.79
ITGB1-207ENST00000439974 FGFR2P21802 821 aa20■□□□□ 0.79
ITGB1-207ENST00000439974 BCAMP50895 628 aa20■□□□□ 0.79
ITGB1-207ENST00000439974 ITPRIPQ8IWB1 547 aa20■□□□□ 0.79
ITGB1-207ENST00000439974 WNK4Q96J92 1243 aa20■□□□□ 0.79
ITGB1-207ENST00000439974 CLMNQ96JQ2 1002 aa20■□□□□ 0.79
ITGB1-207ENST00000439974 CFHR5Q9BXR6 569 aa20■□□□□ 0.79
ITGB1-207ENST00000439974 ZBTB4Q9P1Z0 1013 aaPredicted RBP20■□□□□ 0.79
ITGB1-207ENST00000439974 GPR25O00155 361 aa19.99■□□□□ 0.79
ITGB1-207ENST00000439974 USP2O75604 605 aaPredicted RBP19.99■□□□□ 0.79
ITGB1-207ENST00000439974 ALDH1A1P00352 501 aa19.99■□□□□ 0.79
ITGB1-207ENST00000439974 INHBEP58166 350 aa19.99■□□□□ 0.79
ITGB1-207ENST00000439974 HDLBPQ00341 1268 aaKnown RBP19.99■□□□□ 0.79
ITGB1-207ENST00000439974 GRIK5Q16478 980 aa19.99■□□□□ 0.79
ITGB1-207ENST00000439974 TNNI2P48788 182 aa19.98■□□□□ 0.79
ITGB1-207ENST00000439974 PKN2Q16513 984 aaKnown RBP19.98■□□□□ 0.79
ITGB1-207ENST00000439974 ANKRD13AQ8IZ07 590 aa19.98■□□□□ 0.79
ITGB1-207ENST00000439974 LAMB1P07942 1786 aa19.98■□□□□ 0.79
ITGB1-207ENST00000439974 TCP10L2B9ZVM9 353 aa19.97■□□□□ 0.79
ITGB1-207ENST00000439974 SLC5A1P13866 664 aa19.97■□□□□ 0.79
ITGB1-207ENST00000439974 LPIN2Q92539 896 aa19.97■□□□□ 0.79
ITGB1-207ENST00000439974 TEKT1Q969V4 418 aa19.97■□□□□ 0.79
ITGB1-207ENST00000439974 C1orf115Q9H7X2 142 aa19.97■□□□□ 0.79
ITGB1-207ENST00000439974 FBXO3Q9UK99 471 aa19.97■□□□□ 0.79
ITGB1-207ENST00000439974 SUGT1Q9Y2Z0 365 aa19.97■□□□□ 0.79
ITGB1-207ENST00000439974 MAST3O60307 1309 aa19.97■□□□□ 0.79
ITGB1-207ENST00000439974 OTOFQ9HC10 1997 aa19.96■□□□□ 0.79
ITGB1-207ENST00000439974 ATG9AQ7Z3C6 839 aa19.96■□□□□ 0.79
ITGB1-207ENST00000439974 IFNL1Q8IU54 200 aa19.96■□□□□ 0.79
ITGB1-207ENST00000439974 TEPSINQ96N21 525 aa19.96■□□□□ 0.79
ITGB1-207ENST00000439974 MRIQ9BWK5 157 aa19.96■□□□□ 0.79
ITGB1-207ENST00000439974 HDAC5Q9UQL6 1122 aa19.96■□□□□ 0.79
ITGB1-207ENST00000439974 MYH13Q9UKX3 1938 aa19.96■□□□□ 0.79
ITGB1-207ENST00000439974 FKTNO75072 461 aa19.95■□□□□ 0.78
ITGB1-207ENST00000439974 GNAI3P08754 354 aa19.95■□□□□ 0.78
ITGB1-207ENST00000439974 C20orf194Q5TEA3 1177 aa19.95■□□□□ 0.78
ITGB1-207ENST00000439974 ZDHHC15Q96MV8 337 aa19.95■□□□□ 0.78
ITGB1-207ENST00000439974 TMEM39BQ9GZU3 492 aa19.95■□□□□ 0.78
ITGB1-207ENST00000439974 CIAO1O76071 339 aa19.94■□□□□ 0.78
ITGB1-207ENST00000439974 CDAN1Q8IWY9 1227 aa19.94■□□□□ 0.78
ITGB1-207ENST00000439974 SIL1Q9H173 461 aa19.94■□□□□ 0.78
ITGB1-207ENST00000439974 R3HDMLQ9H3Y0 253 aa19.94■□□□□ 0.78
ITGB1-207ENST00000439974 TMOD2Q9NZR1 351 aa19.94■□□□□ 0.78
ITGB1-207ENST00000439974 HPS5Q9UPZ3 1129 aa19.94■□□□□ 0.78
ITGB1-207ENST00000439974 PA2G4Q9UQ80 394 aaKnown RBP19.94■□□□□ 0.78
ITGB1-207ENST00000439974 IGF2BP3O00425 579 aaKnown RBP eCLIP19.93■□□□□ 0.78
ITGB1-207ENST00000439974 GJA5P36382 358 aa19.93■□□□□ 0.78
ITGB1-207ENST00000439974 WDR66Q8TBY9 1149 aa19.93■□□□□ 0.78
ITGB1-207ENST00000439974 CEP126Q9P2H0 1117 aa19.93■□□□□ 0.78
ITGB1-207ENST00000439974 COG6Q9Y2V7 657 aa19.93■□□□□ 0.78
ITGB1-207ENST00000439974 GNAI2P04899 355 aa19.92■□□□□ 0.78
ITGB1-207ENST00000439974 SOX10P56693 466 aa19.92■□□□□ 0.78
ITGB1-207ENST00000439974 ATP2B3Q16720 1220 aa19.92■□□□□ 0.78
ITGB1-207ENST00000439974 OTUD7BQ6GQQ9 843 aa19.92■□□□□ 0.78
ITGB1-207ENST00000439974 HHIPL2Q6UWX4 724 aa19.92■□□□□ 0.78
ITGB1-207ENST00000439974 ELP3Q9H9T3 547 aa19.92■□□□□ 0.78
ITGB1-207ENST00000439974 IL15P40933 162 aaPredicted RBP19.91■□□□□ 0.78
ITGB1-207ENST00000439974 CACNB3P54284 484 aa19.91■□□□□ 0.78
ITGB1-207ENST00000439974 MAP3K9P80192 1104 aa19.91■□□□□ 0.78
ITGB1-207ENST00000439974 FKBP1CQ5VVH2 108 aa19.91■□□□□ 0.78
ITGB1-207ENST00000439974 APOBEC3HQ6NTF7 200 aaKnown RBP19.91■□□□□ 0.78
ITGB1-207ENST00000439974 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.91■□□□□ 0.78
ITGB1-207ENST00000439974 FAM83AQ86UY5 434 aa19.91■□□□□ 0.78
ITGB1-207ENST00000439974 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.91■□□□□ 0.78
ITGB1-207ENST00000439974 OPTNQ96CV9 577 aa19.91■□□□□ 0.78
ITGB1-207ENST00000439974 TESPA1A2RU30 521 aaPredicted RBP19.9■□□□□ 0.78
ITGB1-207ENST00000439974 ZBTB7BO15156 539 aaPredicted RBP19.9■□□□□ 0.78
ITGB1-207ENST00000439974 SRGAP3O43295 1099 aa19.9■□□□□ 0.78
ITGB1-207ENST00000439974 FBXO46Q6PJ61 603 aaPredicted RBP19.9■□□□□ 0.78
ITGB1-207ENST00000439974 GNL3LQ9NVN8 582 aaKnown RBP19.9■□□□□ 0.78
ITGB1-207ENST00000439974 CSADQ9Y600 493 aa19.9■□□□□ 0.78
ITGB1-207ENST00000439974 PNMA6EA0A0J9YXQ4 647 aa19.89■□□□□ 0.77
ITGB1-207ENST00000439974 VGLL4Q14135 290 aa19.89■□□□□ 0.77
ITGB1-207ENST00000439974 COPRSQ9NQ92 184 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms