RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 RBM6P78332 1123 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 KAT14Q9H8E8 782 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 NCOA5Q9HCD5 579 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 SEC31BQ9NQW1 1179 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 DDX19AQ9NUU7 478 aaKnown RBP13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 PALLDQ8WX93 1383 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 TTLL5Q6EMB2 1281 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 MAP4K1Q92918 833 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 PCMTD1Q96MG8 357 aaPredicted RBP13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 ZKSCAN3Q9BRR0 538 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 DSCC1Q9BVC3 393 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 CEP131Q9UPN4 1083 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 BCAMP50895 628 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 NLRP5P59047 1200 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 TTLL11Q8NHH1 800 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 PARP3Q9Y6F1 533 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 ERICH4A6NGS2 130 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 UFL1O94874 794 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 ADCK5Q3MIX3 580 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 CDK5RAP3Q96JB5 506 aa13.39□□□□□ -0.27
TRAPPC9-202ENST00000438773 HSPD1P10809 573 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-202ENST00000438773 KIF5BP33176 963 aa13.38□□□□□ -0.27
TRAPPC9-202ENST00000438773 GYG1P46976 350 aa13.38□□□□□ -0.27
TRAPPC9-202ENST00000438773 GIMAP6Q6P9H5 292 aa13.38□□□□□ -0.27
TRAPPC9-202ENST00000438773 ZNF589Q86UQ0 364 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC9-202ENST00000438773 SEC63Q9UGP8 760 aaKnown RBP13.38□□□□□ -0.27
TRAPPC9-202ENST00000438773 CYP19A1P11511 503 aaPredicted RBP13.38□□□□□ -0.27
TRAPPC9-202ENST00000438773 HS1BP3Q53T59 392 aa13.38□□□□□ -0.27
TRAPPC9-202ENST00000438773 FAM173BQ6P4H8 233 aa13.38□□□□□ -0.27
TRAPPC9-202ENST00000438773 PI16Q6UXB8 463 aa13.38□□□□□ -0.27
TRAPPC9-202ENST00000438773 SEPT12Q8IYM1 358 aa13.38□□□□□ -0.27
TRAPPC9-202ENST00000438773 C3P01024 1663 aa13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 E7EWF7 191 aa13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 CHRNDQ07001 517 aa13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 ME3Q16798 604 aa13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 DCCP43146 1447 aa13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 KCNQ2O43526 872 aa13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 PDE6AP16499 860 aa13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 SUSD4Q5VX71 490 aa13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 ZSWIM6Q9HCJ5 1215 aa13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 CCAR1Q8IX12 1150 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 FBXO41Q8TF61 875 aa13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 RBM17Q96I25 401 aaKnown RBP13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 VAT1LQ9HCJ6 419 aa13.37□□□□□ -0.27
TRAPPC9-202ENST00000438773 TSPY3P0CV98 308 aa13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 TSPY8P0CW00 308 aa13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 RGS12O14924 1447 aa13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 SERPINC1P01008 464 aa13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 CCDC96Q2M329 555 aa13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 PDILTQ8N807 584 aa13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 DACT1Q9NYF0 836 aa13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 WWC3Q9ULE0 1092 aa13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 ANGEL1Q9UNK9 670 aaKnown RBP13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 PRDM1O75626 825 aa13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 PICALMQ13492 652 aa13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 PDIA6Q15084 440 aa13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 MAP7D2Q96T17 732 aa13.36□□□□□ -0.27
TRAPPC9-202ENST00000438773 CCDC194A0A1B0GVG4 234 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 TRIM37O94972 964 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 BRD1O95696 1058 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 FGAP02671 866 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 ISCA1Q9BUE6 129 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 IL25Q9H293 177 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 GGA1Q9UJY5 639 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 CPDO75976 1380 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 JAK2O60674 1132 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 CTAGE5O15320 804 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 HLA-DOAP06340 250 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 ZMYM1Q5SVZ6 1142 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 CCDC43Q96MW1 224 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 TTC12Q9H892 705 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 ANO10Q9NW15 660 aa13.35□□□□□ -0.27
TRAPPC9-202ENST00000438773 AATFQ9NY61 560 aaKnown RBP eCLIP13.34□□□□□ -0.27
TRAPPC9-202ENST00000438773 SRP68Q9UHB9 627 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-202ENST00000438773 TPCN1Q9ULQ1 816 aa13.34□□□□□ -0.27
TRAPPC9-202ENST00000438773 CYP21A2P08686 494 aa13.34□□□□□ -0.27
TRAPPC9-202ENST00000438773 CTDSPL2Q05D32 466 aa13.34□□□□□ -0.27
TRAPPC9-202ENST00000438773 ERFEQ4G0M1 354 aa13.34□□□□□ -0.27
TRAPPC9-202ENST00000438773 TMEM87BQ96K49 555 aa13.34□□□□□ -0.27
TRAPPC9-202ENST00000438773 ANKRD26Q9UPS8 1709 aa13.34□□□□□ -0.27
TRAPPC9-202ENST00000438773 BIN1O00499 593 aa13.34□□□□□ -0.27
TRAPPC9-202ENST00000438773 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-202ENST00000438773 WDR66Q8TBY9 1149 aa13.33□□□□□ -0.27
TRAPPC9-202ENST00000438773 SPATA31A6Q5VVP1 1343 aa13.33□□□□□ -0.27
TRAPPC9-202ENST00000438773 SNAP23O00161 211 aa13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 TRIM28Q13263 835 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 CNNM3Q8NE01 707 aa13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 IPO7O95373 1038 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 PLCG2P16885 1265 aa13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 MARCKSP29966 332 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 ZNF165P49910 485 aa13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 DACH1Q9UI36 760 aa13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 MEGF6O75095 1541 aa13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 TERF1P54274 439 aa13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 KCNG4Q8TDN1 519 aa13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 LLPHQ9BRT6 129 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 MAST3O60307 1309 aa13.33□□□□□ -0.28
TRAPPC9-202ENST00000438773 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms