RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 OGFOD1Q8N543 542 aa12.81□□□□□ -0.36
HLA-DMB-259ENST00000438510 DPF2Q92785 391 aa12.81□□□□□ -0.36
HLA-DMB-259ENST00000438510 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.81□□□□□ -0.36
HLA-DMB-259ENST00000438510 HDAC9Q9UKV0 1011 aa12.81□□□□□ -0.36
HLA-DMB-259ENST00000438510 NDUFB9Q9Y6M9 179 aa12.81□□□□□ -0.36
HLA-DMB-259ENST00000438510 RFX7Q2KHR2 1363 aa12.81□□□□□ -0.36
HLA-DMB-259ENST00000438510 IDH1O75874 414 aaKnown RBP12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 LMOD1P29536 600 aaPredicted RBP12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 PRDX5P30044 214 aa12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 GMPSP49915 693 aaPredicted RBP12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 ZSCAN25Q6NSZ9 544 aa12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 TBC1D9Q6ZT07 1266 aa12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 KIAA0825Q8IV33 1275 aa12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 SLF2Q8IX21 1173 aa12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 CERS5Q8N5B7 392 aa12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 KBTBD3Q8NAB2 608 aa12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 EVI5LQ96CN4 794 aa12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 MXD3Q9BW11 206 aa12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 RAI14Q9P0K7 980 aa12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 TTF2Q9UNY4 1162 aaKnown RBP12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 ZBTB12Q9Y330 459 aaPredicted RBP12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 CDK5RAP2Q96SN8 1893 aa12.8□□□□□ -0.36
HLA-DMB-259ENST00000438510 FOCADQ5VW36 1801 aa12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 DDNO94850 711 aaPredicted RBP12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 MAP4K4O95819 1239 aaPredicted RBP12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 USP17L8P0C7I0 530 aa12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 GSTO1P78417 241 aa12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 HDLBPQ00341 1268 aaKnown RBP12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 SKAP1Q86WV1 359 aa12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 TICAM2Q86XR7 235 aa12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 L3MBTL3Q96JM7 780 aaPredicted RBP12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 GMLQ99445 158 aa12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 FSD1Q9BTV5 496 aa12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 ANTXR1Q9H6X2 564 aa12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 PIH1D3Q9NQM4 214 aaKnown RBP12.79□□□□□ -0.36
HLA-DMB-259ENST00000438510 IQCA1LA6NCM1 817 aa12.78□□□□□ -0.36
HLA-DMB-259ENST00000438510 F8W031 263 aaPredicted RBP12.78□□□□□ -0.36
HLA-DMB-259ENST00000438510 GSPT1P15170 499 aaKnown RBP12.78□□□□□ -0.36
HLA-DMB-259ENST00000438510 MECOMQ03112 1051 aa12.78□□□□□ -0.36
HLA-DMB-259ENST00000438510 BMP2KLQ5H9B9 411 aa12.78□□□□□ -0.36
HLA-DMB-259ENST00000438510 TEKT1Q969V4 418 aa12.78□□□□□ -0.36
HLA-DMB-259ENST00000438510 RILPL2Q969X0 211 aa12.78□□□□□ -0.36
HLA-DMB-259ENST00000438510 EDC3Q96F86 508 aaKnown RBP12.78□□□□□ -0.36
HLA-DMB-259ENST00000438510 GPRC5DQ9NZD1 345 aa12.78□□□□□ -0.36
HLA-DMB-259ENST00000438510 SERPINA10Q9UK55 444 aa12.78□□□□□ -0.36
HLA-DMB-259ENST00000438510 H7C1D1 291 aa12.77□□□□□ -0.37
HLA-DMB-259ENST00000438510 LDHCP07864 332 aa12.77□□□□□ -0.37
HLA-DMB-259ENST00000438510 ZFYP08048 801 aaPredicted RBP12.77□□□□□ -0.37
HLA-DMB-259ENST00000438510 SCNN1DP51172 638 aa12.77□□□□□ -0.37
HLA-DMB-259ENST00000438510 ZNF280AP59817 542 aaPredicted RBP12.77□□□□□ -0.37
HLA-DMB-259ENST00000438510 NAA16Q6N069 864 aaPredicted RBP12.77□□□□□ -0.37
HLA-DMB-259ENST00000438510 MICALL2Q8IY33 904 aa12.77□□□□□ -0.37
HLA-DMB-259ENST00000438510 MAGEB6Q8N7X4 407 aa12.77□□□□□ -0.37
HLA-DMB-259ENST00000438510 NSUN4Q96CB9 384 aaKnown RBP12.77□□□□□ -0.37
HLA-DMB-259ENST00000438510 MRIQ9BWK5 157 aa12.77□□□□□ -0.37
HLA-DMB-259ENST00000438510 CNOT7Q9UIV1 285 aaKnown RBP12.77□□□□□ -0.37
HLA-DMB-259ENST00000438510 HIP1O00291 1037 aa12.76□□□□□ -0.37
HLA-DMB-259ENST00000438510 PDE6AP16499 860 aa12.76□□□□□ -0.37
HLA-DMB-259ENST00000438510 SDSP20132 328 aa12.76□□□□□ -0.37
HLA-DMB-259ENST00000438510 ADD2P35612 726 aa12.76□□□□□ -0.37
HLA-DMB-259ENST00000438510 CRKP46108 304 aa12.76□□□□□ -0.37
HLA-DMB-259ENST00000438510 GRIK5Q16478 980 aa12.76□□□□□ -0.37
HLA-DMB-259ENST00000438510 SLC9C2Q5TAH2 1124 aa12.76□□□□□ -0.37
HLA-DMB-259ENST00000438510 HHIPL2Q6UWX4 724 aa12.76□□□□□ -0.37
HLA-DMB-259ENST00000438510 NOL10Q9BSC4 688 aaKnown RBP12.76□□□□□ -0.37
HLA-DMB-259ENST00000438510 HACL1Q9UJ83 578 aa12.76□□□□□ -0.37
HLA-DMB-259ENST00000438510 MROH7-TTC4A0A0A0MT08 1334 aa12.76□□□□□ -0.37
HLA-DMB-259ENST00000438510 NAV1Q8NEY1 1877 aa12.76□□□□□ -0.37
HLA-DMB-259ENST00000438510 GAKO14976 1311 aa12.75□□□□□ -0.37
HLA-DMB-259ENST00000438510 CYP7A1P22680 504 aa12.75□□□□□ -0.37
HLA-DMB-259ENST00000438510 RBM5P52756 815 aaKnown RBP eCLIP12.75□□□□□ -0.37
HLA-DMB-259ENST00000438510 UBE3CQ15386 1083 aa12.75□□□□□ -0.37
HLA-DMB-259ENST00000438510 CERS3Q8IU89 383 aa12.75□□□□□ -0.37
HLA-DMB-259ENST00000438510 MTMR14Q8NCE2 650 aa12.75□□□□□ -0.37
HLA-DMB-259ENST00000438510 MYOZ2Q9NPC6 264 aa12.75□□□□□ -0.37
HLA-DMB-259ENST00000438510 ADARB2Q9NS39 739 aaKnown RBP12.75□□□□□ -0.37
HLA-DMB-259ENST00000438510 ZNF532Q9HCE3 1301 aa12.74□□□□□ -0.37
HLA-DMB-259ENST00000438510 RNF113AO15541 343 aaKnown RBP12.74□□□□□ -0.37
HLA-DMB-259ENST00000438510 BAG3O95817 575 aa12.74□□□□□ -0.37
HLA-DMB-259ENST00000438510 DLGAP5Q15398 846 aa12.74□□□□□ -0.37
HLA-DMB-259ENST00000438510 DIXDC1Q155Q3 683 aa12.74□□□□□ -0.37
HLA-DMB-259ENST00000438510 KIF4BQ2VIQ3 1234 aa12.74□□□□□ -0.37
HLA-DMB-259ENST00000438510 CFAP100Q494V2 611 aa12.74□□□□□ -0.37
HLA-DMB-259ENST00000438510 FAM163AQ96GL9 167 aaPredicted RBP12.74□□□□□ -0.37
HLA-DMB-259ENST00000438510 ZDHHC15Q96MV8 337 aa12.74□□□□□ -0.37
HLA-DMB-259ENST00000438510 DIAPH3Q9NSV4 1193 aa12.74□□□□□ -0.37
HLA-DMB-259ENST00000438510 MYH1P12882 1939 aa12.73□□□□□ -0.37
HLA-DMB-259ENST00000438510 TCRBV5S4A2TA0A5A2 114 aa12.73□□□□□ -0.37
HLA-DMB-259ENST00000438510 MYO1BO43795 1136 aa12.73□□□□□ -0.37
HLA-DMB-259ENST00000438510 VEGFAP15692 232 aaPredicted RBP12.73□□□□□ -0.37
HLA-DMB-259ENST00000438510 PLCG2P16885 1265 aa12.73□□□□□ -0.37
HLA-DMB-259ENST00000438510 EPHX2P34913 555 aa12.73□□□□□ -0.37
HLA-DMB-259ENST00000438510 CASC1Q6TDU7 716 aa12.73□□□□□ -0.37
HLA-DMB-259ENST00000438510 USP50Q70EL3 339 aaPredicted RBP12.73□□□□□ -0.37
HLA-DMB-259ENST00000438510 ZNF384Q8TF68 577 aa12.73□□□□□ -0.37
HLA-DMB-259ENST00000438510 APPBP2Q92624 585 aa12.73□□□□□ -0.37
HLA-DMB-259ENST00000438510 DAGLAQ9Y4D2 1042 aa12.73□□□□□ -0.37
HLA-DMB-259ENST00000438510 POLR2AP24928 1970 aaKnown RBP12.72□□□□□ -0.37
HLA-DMB-259ENST00000438510 LAMB1P07942 1786 aa12.72□□□□□ -0.37
HLA-DMB-259ENST00000438510 GPR75-ASB3A0A0A6YYF3 556 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms