RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 VEGFBP49765 207 aa10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 CAMK2BQ13554 666 aa10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 SCARF1Q14162 830 aa10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 NBPF9Q3BBW0 867 aa10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 METTL24Q5JXM2 366 aa10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 ZKSCAN2Q63HK3 967 aa10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 CDC37L1Q7L3B6 337 aa10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 ZNF804AQ7Z570 1209 aa10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 KIAA0825Q8IV33 1275 aa10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 TDRD7Q8NHU6 1098 aaKnown RBP10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 ZBED3Q96IU2 234 aaPredicted RBP10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 SIL1Q9H173 461 aa10.68□□□□□ -0.7
HERPUD2-206ENST00000438224 FAM205AQ6ZU69 1335 aa10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 MYO3BQ8WXR4 1341 aa10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 WNT10BO00744 389 aa10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 IPO8O15397 1037 aaKnown RBP10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 SASH1O94885 1247 aa10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 CELF2O95319 508 aaKnown RBP10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 MTX1Q13505 466 aa10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 GRIK5Q16478 980 aa10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 ANGEL2Q5VTE6 544 aaKnown RBP10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 KRT26Q7Z3Y9 468 aa10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 FBXO33Q7Z6M2 555 aa10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 CRISPLD2Q9H0B8 497 aa10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 IQSEC3Q9UPP2 1182 aaPredicted RBP10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 MYO5AQ9Y4I1 1855 aaKnown RBP10.67□□□□□ -0.7
HERPUD2-206ENST00000438224 PNMA6EA0A0J9YXQ4 647 aa10.66□□□□□ -0.7
HERPUD2-206ENST00000438224 GNAI3P08754 354 aa10.66□□□□□ -0.7
HERPUD2-206ENST00000438224 HIBADHP31937 336 aaKnown RBP10.66□□□□□ -0.7
HERPUD2-206ENST00000438224 BCAMP50895 628 aa10.66□□□□□ -0.7
HERPUD2-206ENST00000438224 ZNF408Q9H9D4 720 aa10.66□□□□□ -0.7
HERPUD2-206ENST00000438224 COPRSQ9NQ92 184 aa10.66□□□□□ -0.7
HERPUD2-206ENST00000438224 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
HERPUD2-206ENST00000438224 TLL2Q9Y6L7 1015 aa10.66□□□□□ -0.7
HERPUD2-206ENST00000438224 MYH2Q9UKX2 1941 aa10.66□□□□□ -0.7
HERPUD2-206ENST00000438224 PAPPA2Q9BXP8 1791 aa10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 OTOFQ9HC10 1997 aa10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 AKAP11Q9UKA4 1901 aa10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 F8W031 263 aaPredicted RBP10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 APBB1O00213 710 aa10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 CIAO1O76071 339 aa10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 MLLT3P42568 568 aaPredicted RBP10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 PUM3Q15397 648 aaKnown RBP10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 CYP4F22Q6NT55 531 aa10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 SAPCD2Q86UD0 394 aa10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 PANK1Q8TE04 598 aa10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 DCPSQ96C86 337 aaKnown RBP10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 CDCA5Q96FF9 252 aa10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 ABT1Q9ULW3 272 aaKnown RBP10.65□□□□□ -0.7
HERPUD2-206ENST00000438224 PITPNM2Q9BZ72 1349 aa10.64□□□□□ -0.71
HERPUD2-206ENST00000438224 SRGAP3O43295 1099 aa10.64□□□□□ -0.71
HERPUD2-206ENST00000438224 HSPA1AP0DMV8 641 aaKnown RBP10.64□□□□□ -0.71
HERPUD2-206ENST00000438224 HSPA1BP0DMV9 641 aaKnown RBP10.64□□□□□ -0.71
HERPUD2-206ENST00000438224 FKBP1AP62942 108 aaKnown RBP10.64□□□□□ -0.71
HERPUD2-206ENST00000438224 DEFB115Q30KQ5 88 aa10.64□□□□□ -0.71
HERPUD2-206ENST00000438224 PRAMEF18Q5VWM3 479 aa10.64□□□□□ -0.71
HERPUD2-206ENST00000438224 DZIP1LQ8IYY4 767 aaKnown RBP10.64□□□□□ -0.71
HERPUD2-206ENST00000438224 SSC5DA1L4H1 1573 aa10.64□□□□□ -0.71
HERPUD2-206ENST00000438224 WDR33Q9C0J8 1336 aaKnown RBP10.63□□□□□ -0.71
HERPUD2-206ENST00000438224 GNAI2P04899 355 aa10.63□□□□□ -0.71
HERPUD2-206ENST00000438224 PDIA4P13667 645 aaKnown RBP10.63□□□□□ -0.71
HERPUD2-206ENST00000438224 ADORA1P30542 326 aa10.63□□□□□ -0.71
HERPUD2-206ENST00000438224 ATP2B3Q16720 1220 aa10.63□□□□□ -0.71
HERPUD2-206ENST00000438224 MFSD14BQ5SR56 506 aa10.63□□□□□ -0.71
HERPUD2-206ENST00000438224 SULF1Q8IWU6 871 aa10.63□□□□□ -0.71
HERPUD2-206ENST00000438224 OGFOD1Q8N543 542 aa10.63□□□□□ -0.71
HERPUD2-206ENST00000438224 CAPNS2Q96L46 248 aa10.63□□□□□ -0.71
HERPUD2-206ENST00000438224 ZIC5Q96T25 663 aa10.63□□□□□ -0.71
HERPUD2-206ENST00000438224 ZBTB7BO15156 539 aaPredicted RBP10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 AOC2O75106 756 aa10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 IFIT1P09914 478 aaKnown RBP10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 CD44P16070 742 aaKnown RBP10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 IL15P40933 162 aaPredicted RBP10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 PHKA1P46020 1223 aa10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 CHAF1AQ13111 956 aaPredicted RBP10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 CFAP100Q494V2 611 aa10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 MOB2Q70IA6 237 aa10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 ITPRIPQ8IWB1 547 aa10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 MTMR14Q8NCE2 650 aa10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 LPIN2Q92539 896 aa10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 PRMT6Q96LA8 375 aaPredicted RBP10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 FAM117AQ9C073 453 aa10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 GBA2Q9HCG7 927 aaPredicted RBP10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 CEP126Q9P2H0 1117 aa10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 LAMB1P07942 1786 aa10.62□□□□□ -0.71
HERPUD2-206ENST00000438224 CASP8AP2Q9UKL3 1982 aa10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 AK9Q5TCS8 1911 aa10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 CLRN2A0PK11 232 aa10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 FOXN1O15353 648 aa10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 SLC5A1P13866 664 aa10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 HUNKP57058 714 aa10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 TFCP2Q12800 502 aa10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 GRM1Q13255 1194 aa10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 DLGAP5Q15398 846 aa10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 FTSJ3Q8IY81 847 aaKnown RBP10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 HDAC9Q9UKV0 1011 aa10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 TTF2Q9UNY4 1162 aaKnown RBP10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 HDAC5Q9UQL6 1122 aa10.61□□□□□ -0.71
HERPUD2-206ENST00000438224 CDK5RAP2Q96SN8 1893 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms