RNA–Protein interactions for RNA: ENST00000436461.6

CALD1-209, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 1,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-209ENST00000436461 GPC2Q8N158 579 aa20.35■□□□□ 0.85
CALD1-209ENST00000436461 FKBP1AP62942 108 aaKnown RBP20.35■□□□□ 0.85
CALD1-209ENST00000436461 DZIP1Q86YF9 867 aaKnown RBP20.35■□□□□ 0.85
CALD1-209ENST00000436461 MAGEB6Q8N7X4 407 aa20.35■□□□□ 0.85
CALD1-209ENST00000436461 PCDHAC2Q9Y5I4 1007 aa20.35■□□□□ 0.85
CALD1-209ENST00000436461 BMP2KLQ5H9B9 411 aa20.34■□□□□ 0.85
CALD1-209ENST00000436461 NSUN4Q96CB9 384 aaKnown RBP20.34■□□□□ 0.85
CALD1-209ENST00000436461 MYO3BQ8WXR4 1341 aa20.33■□□□□ 0.85
CALD1-209ENST00000436461 ZC3H4Q9UPT8 1303 aaKnown RBP20.33■□□□□ 0.85
CALD1-209ENST00000436461 MAP3K12Q12852 859 aa20.33■□□□□ 0.84
CALD1-209ENST00000436461 SLC9C2Q5TAH2 1124 aa20.33■□□□□ 0.84
CALD1-209ENST00000436461 SPTY2D1Q68D10 685 aaPredicted RBP20.33■□□□□ 0.84
CALD1-209ENST00000436461 ADGRA1Q86SQ6 560 aa20.33■□□□□ 0.84
CALD1-209ENST00000436461 AGBL3Q8NEM8 1001 aa20.33■□□□□ 0.84
CALD1-209ENST00000436461 GLTPD2A6NH11 291 aa20.32■□□□□ 0.84
CALD1-209ENST00000436461 PDE6AP16499 860 aa20.32■□□□□ 0.84
CALD1-209ENST00000436461 DPY19L2Q6NUT2 758 aa20.32■□□□□ 0.84
CALD1-209ENST00000436461 NAA16Q6N069 864 aaPredicted RBP20.31■□□□□ 0.84
CALD1-209ENST00000436461 MICALL2Q8IY33 904 aa20.31■□□□□ 0.84
CALD1-209ENST00000436461 ZNF532Q9HCE3 1301 aa20.31■□□□□ 0.84
CALD1-209ENST00000436461 EGFRP00533 1210 aa20.31■□□□□ 0.84
CALD1-209ENST00000436461 USP17L8P0C7I0 530 aa20.31■□□□□ 0.84
CALD1-209ENST00000436461 ADD2P35612 726 aa20.31■□□□□ 0.84
CALD1-209ENST00000436461 ZNF526Q8TF50 670 aaPredicted RBP20.31■□□□□ 0.84
CALD1-209ENST00000436461 CNOT7Q9UIV1 285 aaKnown RBP20.31■□□□□ 0.84
CALD1-209ENST00000436461 SUGT1Q9Y2Z0 365 aa20.31■□□□□ 0.84
CALD1-209ENST00000436461 TCRBV5S4A2TA0A5A2 114 aa20.3■□□□□ 0.84
CALD1-209ENST00000436461 CYP7A1P22680 504 aa20.3■□□□□ 0.84
CALD1-209ENST00000436461 RPS12P25398 132 aaKnown RBP20.3■□□□□ 0.84
CALD1-209ENST00000436461 EPS15P42566 896 aa20.3■□□□□ 0.84
CALD1-209ENST00000436461 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.3■□□□□ 0.84
CALD1-209ENST00000436461 CRKP46108 304 aa20.29■□□□□ 0.84
CALD1-209ENST00000436461 RBM5P52756 815 aaKnown RBP eCLIP20.29■□□□□ 0.84
CALD1-209ENST00000436461 RBM26Q5T8P6 1007 aaKnown RBP20.29■□□□□ 0.84
CALD1-209ENST00000436461 SAMD7Q7Z3H4 446 aa20.29■□□□□ 0.84
CALD1-209ENST00000436461 MIGA1Q8NAN2 632 aa20.29■□□□□ 0.84
CALD1-209ENST00000436461 DPF2Q92785 391 aa20.29■□□□□ 0.84
CALD1-209ENST00000436461 FAM227BQ96M60 508 aa20.29■□□□□ 0.84
CALD1-209ENST00000436461 SEC62Q99442 399 aaKnown RBP20.29■□□□□ 0.84
CALD1-209ENST00000436461 GPRC5DQ9NZD1 345 aa20.29■□□□□ 0.84
CALD1-209ENST00000436461 RNF113AO15541 343 aaKnown RBP20.28■□□□□ 0.84
CALD1-209ENST00000436461 OGFOD1Q8N543 542 aa20.28■□□□□ 0.84
CALD1-209ENST00000436461 HDAC9Q9UKV0 1011 aa20.28■□□□□ 0.84
CALD1-209ENST00000436461 DAGLAQ9Y4D2 1042 aa20.28■□□□□ 0.84
CALD1-209ENST00000436461 CFAP100Q494V2 611 aa20.27■□□□□ 0.84
CALD1-209ENST00000436461 TBC1D10BQ4KMP7 808 aaPredicted RBP20.27■□□□□ 0.84
CALD1-209ENST00000436461 TEKT1Q969V4 418 aa20.27■□□□□ 0.84
CALD1-209ENST00000436461 PUS7LQ9H0K6 701 aaKnown RBP20.27■□□□□ 0.84
CALD1-209ENST00000436461 MROH7-TTC4A0A0A0MT08 1334 aa20.27■□□□□ 0.84
CALD1-209ENST00000436461 MAST3O60307 1309 aa20.27■□□□□ 0.84
CALD1-209ENST00000436461 WDR90Q96KV7 1748 aa20.27■□□□□ 0.84
CALD1-209ENST00000436461 A0A0D9SFI3 127 aa20.27■□□□□ 0.83
CALD1-209ENST00000436461 NMIQ13287 307 aaPredicted RBP20.27■□□□□ 0.83
CALD1-209ENST00000436461 ZSCAN25Q6NSZ9 544 aa20.27■□□□□ 0.83
CALD1-209ENST00000436461 CWC27Q6UX04 472 aaKnown RBP20.27■□□□□ 0.83
CALD1-209ENST00000436461 OSBP2Q969R2 916 aa20.27■□□□□ 0.83
CALD1-209ENST00000436461 MYOZ2Q9NPC6 264 aa20.27■□□□□ 0.83
CALD1-209ENST00000436461 AATFQ9NY61 560 aaKnown RBP eCLIP20.27■□□□□ 0.83
CALD1-209ENST00000436461 POTECB2RU33 542 aa20.26■□□□□ 0.83
CALD1-209ENST00000436461 ZNF280AP59817 542 aaPredicted RBP20.26■□□□□ 0.83
CALD1-209ENST00000436461 DYNLL1P63167 89 aaKnown RBP20.26■□□□□ 0.83
CALD1-209ENST00000436461 UBE3CQ15386 1083 aa20.26■□□□□ 0.83
CALD1-209ENST00000436461 TRPM4Q8TD43 1214 aa20.26■□□□□ 0.83
CALD1-209ENST00000436461 L3MBTL3Q96JM7 780 aaPredicted RBP20.26■□□□□ 0.83
CALD1-209ENST00000436461 IL25Q9H293 177 aa20.26■□□□□ 0.83
CALD1-209ENST00000436461 SERPINA10Q9UK55 444 aa20.26■□□□□ 0.83
CALD1-209ENST00000436461 M0R2C6 588 aa20.25■□□□□ 0.83
CALD1-209ENST00000436461 CHMLP26374 656 aa20.25■□□□□ 0.83
CALD1-209ENST00000436461 LMOD1P29536 600 aaPredicted RBP20.25■□□□□ 0.83
CALD1-209ENST00000436461 BTDP43251 543 aa20.25■□□□□ 0.83
CALD1-209ENST00000436461 GSTO1P78417 241 aa20.25■□□□□ 0.83
CALD1-209ENST00000436461 CCDC129Q6ZRS4 1044 aa20.25■□□□□ 0.83
CALD1-209ENST00000436461 PRMT6Q96LA8 375 aaPredicted RBP20.25■□□□□ 0.83
CALD1-209ENST00000436461 DIAPH3Q9NSV4 1193 aa20.25■□□□□ 0.83
CALD1-209ENST00000436461 GAKO14976 1311 aa20.25■□□□□ 0.83
CALD1-209ENST00000436461 SCN4AP35499 1836 aa20.25■□□□□ 0.83
CALD1-209ENST00000436461 RFX7Q2KHR2 1363 aa20.25■□□□□ 0.83
CALD1-209ENST00000436461 H7C1D1 291 aa20.24■□□□□ 0.83
CALD1-209ENST00000436461 ZFYP08048 801 aaPredicted RBP20.24■□□□□ 0.83
CALD1-209ENST00000436461 NBPF9Q3BBW0 867 aa20.24■□□□□ 0.83
CALD1-209ENST00000436461 ZMYM1Q5SVZ6 1142 aa20.24■□□□□ 0.83
CALD1-209ENST00000436461 APOBEC3HQ6NTF7 200 aaKnown RBP20.24■□□□□ 0.83
CALD1-209ENST00000436461 HHIPL2Q6UWX4 724 aa20.24■□□□□ 0.83
CALD1-209ENST00000436461 APPBP2Q92624 585 aa20.24■□□□□ 0.83
CALD1-209ENST00000436461 HDLBPQ00341 1268 aaKnown RBP20.24■□□□□ 0.83
CALD1-209ENST00000436461 DLGAP5Q15398 846 aa20.24■□□□□ 0.83
CALD1-209ENST00000436461 KIF4BQ2VIQ3 1234 aa20.24■□□□□ 0.83
CALD1-209ENST00000436461 ZDHHC15Q96MV8 337 aa20.24■□□□□ 0.83
CALD1-209ENST00000436461 ASTN2O75129 1339 aaPredicted RBP20.23■□□□□ 0.83
CALD1-209ENST00000436461 ECM29Q5VYK3 1845 aa20.23■□□□□ 0.83
CALD1-209ENST00000436461 CDK5RAP2Q96SN8 1893 aa20.23■□□□□ 0.83
CALD1-209ENST00000436461 WNT10BO00744 389 aa20.23■□□□□ 0.83
CALD1-209ENST00000436461 CDC45O75419 566 aa20.23■□□□□ 0.83
CALD1-209ENST00000436461 LDHCP07864 332 aa20.23■□□□□ 0.83
CALD1-209ENST00000436461 LRRFIP1Q32MZ4 808 aaKnown RBP20.23■□□□□ 0.83
CALD1-209ENST00000436461 SLF2Q8IX21 1173 aa20.23■□□□□ 0.83
CALD1-209ENST00000436461 LCORLQ8N3X6 602 aa20.23■□□□□ 0.83
CALD1-209ENST00000436461 FAM163AQ96GL9 167 aaPredicted RBP20.23■□□□□ 0.83
CALD1-209ENST00000436461 TDRD3Q9H7E2 651 aaKnown RBP20.23■□□□□ 0.83
CALD1-209ENST00000436461 ARMT1Q9H993 441 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms