RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 REM2Q8IYK8 340 aaPredicted RBP13.55□□□□□ -0.24
HMGCL-204ENST00000436439 PRMT6Q96LA8 375 aaPredicted RBP13.55□□□□□ -0.24
HMGCL-204ENST00000436439 DEFB129Q9H1M3 183 aa13.55□□□□□ -0.24
HMGCL-204ENST00000436439 RBM19Q9Y4C8 960 aaKnown RBP13.55□□□□□ -0.24
HMGCL-204ENST00000436439 SPDYE2BA6NHP3 402 aa13.54□□□□□ -0.24
HMGCL-204ENST00000436439 SPDYE6P0CI01 402 aa13.54□□□□□ -0.24
HMGCL-204ENST00000436439 GYG1P46976 350 aa13.54□□□□□ -0.24
HMGCL-204ENST00000436439 TM4SF4P48230 202 aa13.54□□□□□ -0.24
HMGCL-204ENST00000436439 LDLRAD1Q5T700 205 aa13.54□□□□□ -0.24
HMGCL-204ENST00000436439 SIRT2Q8IXJ6 389 aa13.54□□□□□ -0.24
HMGCL-204ENST00000436439 BICC1Q9H694 974 aaKnown RBP13.54□□□□□ -0.24
HMGCL-204ENST00000436439 C1orf115Q9H7X2 142 aa13.54□□□□□ -0.24
HMGCL-204ENST00000436439 ANGEL1Q9UNK9 670 aaKnown RBP13.54□□□□□ -0.24
HMGCL-204ENST00000436439 MYH13Q9UKX3 1938 aa13.53□□□□□ -0.24
HMGCL-204ENST00000436439 MLLT1Q03111 559 aaPredicted RBP13.53□□□□□ -0.24
HMGCL-204ENST00000436439 UBE4AQ14139 1066 aa13.53□□□□□ -0.24
HMGCL-204ENST00000436439 ARMC9Q7Z3E5 817 aa13.53□□□□□ -0.24
HMGCL-204ENST00000436439 SMC5Q8IY18 1101 aa13.53□□□□□ -0.24
HMGCL-204ENST00000436439 TDRD7Q8NHU6 1098 aaKnown RBP13.53□□□□□ -0.24
HMGCL-204ENST00000436439 FAM84BQ96KN1 310 aaPredicted RBP13.53□□□□□ -0.24
HMGCL-204ENST00000436439 RIPOR2Q9Y4F9 1068 aa13.53□□□□□ -0.24
HMGCL-204ENST00000436439 FAM205AQ6ZU69 1335 aa13.53□□□□□ -0.24
HMGCL-204ENST00000436439 TNRC18O15417 2968 aaPredicted RBP13.52□□□□□ -0.25
HMGCL-204ENST00000436439 HMMRO75330 724 aa13.52□□□□□ -0.25
HMGCL-204ENST00000436439 ATP8B2P98198 1209 aa13.52□□□□□ -0.25
HMGCL-204ENST00000436439 MTX1Q13505 466 aa13.52□□□□□ -0.25
HMGCL-204ENST00000436439 RABL6Q3YEC7 729 aaPredicted RBP13.52□□□□□ -0.25
HMGCL-204ENST00000436439 LRRC24Q50LG9 513 aa13.52□□□□□ -0.25
HMGCL-204ENST00000436439 ZNF296Q8WUU4 475 aaPredicted RBP13.52□□□□□ -0.25
HMGCL-204ENST00000436439 GCC1Q96CN9 775 aa13.52□□□□□ -0.25
HMGCL-204ENST00000436439 R3HDMLQ9H3Y0 253 aa13.52□□□□□ -0.25
HMGCL-204ENST00000436439 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.52□□□□□ -0.25
HMGCL-204ENST00000436439 LRRFIP2Q9Y608 721 aaKnown RBP13.52□□□□□ -0.25
HMGCL-204ENST00000436439 HIBADHP31937 336 aaKnown RBP13.51□□□□□ -0.25
HMGCL-204ENST00000436439 GRIK5Q16478 980 aa13.51□□□□□ -0.25
HMGCL-204ENST00000436439 MAP3K11Q16584 847 aa13.51□□□□□ -0.25
HMGCL-204ENST00000436439 MFSD14BQ5SR56 506 aa13.51□□□□□ -0.25
HMGCL-204ENST00000436439 NBPF12Q5TAG4 269 aaPredicted RBP13.51□□□□□ -0.25
HMGCL-204ENST00000436439 SPRYD7Q5W111 196 aa13.51□□□□□ -0.25
HMGCL-204ENST00000436439 CTU1Q7Z7A3 348 aaKnown RBP13.51□□□□□ -0.25
HMGCL-204ENST00000436439 KLHDC4Q8TBB5 520 aa13.51□□□□□ -0.25
HMGCL-204ENST00000436439 CLMNQ96JQ2 1002 aa13.51□□□□□ -0.25
HMGCL-204ENST00000436439 VEZTQ9HBM0 779 aa13.51□□□□□ -0.25
HMGCL-204ENST00000436439 RBM5P52756 815 aaKnown RBP eCLIP13.5□□□□□ -0.25
HMGCL-204ENST00000436439 SSH3Q8TE77 659 aa13.5□□□□□ -0.25
HMGCL-204ENST00000436439 IQSEC3Q9UPP2 1182 aaPredicted RBP13.5□□□□□ -0.25
HMGCL-204ENST00000436439 PPP2R3BQ9Y5P8 575 aa13.5□□□□□ -0.25
HMGCL-204ENST00000436439 GPR25O00155 361 aa13.49□□□□□ -0.25
HMGCL-204ENST00000436439 MYO1BO43795 1136 aa13.49□□□□□ -0.25
HMGCL-204ENST00000436439 SOX10P56693 466 aa13.49□□□□□ -0.25
HMGCL-204ENST00000436439 SREBF2Q12772 1141 aa13.49□□□□□ -0.25
HMGCL-204ENST00000436439 CDAN1Q8IWY9 1227 aa13.49□□□□□ -0.25
HMGCL-204ENST00000436439 VGLL2Q8N8G2 317 aa13.49□□□□□ -0.25
HMGCL-204ENST00000436439 DCTPP1Q9H773 170 aa13.49□□□□□ -0.25
HMGCL-204ENST00000436439 TDRD3Q9H7E2 651 aaKnown RBP13.49□□□□□ -0.25
HMGCL-204ENST00000436439 TTF2Q9UNY4 1162 aaKnown RBP13.49□□□□□ -0.25
HMGCL-204ENST00000436439 MROH5Q6ZUA9 1318 aa13.49□□□□□ -0.25
HMGCL-204ENST00000436439 USP2O75604 605 aaPredicted RBP13.48□□□□□ -0.25
HMGCL-204ENST00000436439 GJA5P36382 358 aa13.48□□□□□ -0.25
HMGCL-204ENST00000436439 POLA2Q14181 598 aa13.48□□□□□ -0.25
HMGCL-204ENST00000436439 RASA3Q14644 834 aa13.48□□□□□ -0.25
HMGCL-204ENST00000436439 SPDYE2Q495Y8 402 aa13.48□□□□□ -0.25
HMGCL-204ENST00000436439 FBXO33Q7Z6M2 555 aa13.48□□□□□ -0.25
HMGCL-204ENST00000436439 SLC10A4Q96EP9 437 aa13.48□□□□□ -0.25
HMGCL-204ENST00000436439 WNK4Q96J92 1243 aa13.48□□□□□ -0.25
HMGCL-204ENST00000436439 ZNF70Q9UC06 446 aaPredicted RBP13.48□□□□□ -0.25
HMGCL-204ENST00000436439 PNMA6EA0A0J9YXQ4 647 aa13.47□□□□□ -0.25
HMGCL-204ENST00000436439 PPP1R12BO60237 982 aaPredicted RBP13.47□□□□□ -0.25
HMGCL-204ENST00000436439 PDE8BO95263 885 aa13.47□□□□□ -0.25
HMGCL-204ENST00000436439 METTL24Q5JXM2 366 aa13.47□□□□□ -0.25
HMGCL-204ENST00000436439 CFHR5Q9BXR6 569 aa13.47□□□□□ -0.25
HMGCL-204ENST00000436439 SERPINA10Q9UK55 444 aa13.47□□□□□ -0.25
HMGCL-204ENST00000436439 HPS5Q9UPZ3 1129 aa13.47□□□□□ -0.25
HMGCL-204ENST00000436439 IGF2BP3O00425 579 aaKnown RBP eCLIP13.46□□□□□ -0.25
HMGCL-204ENST00000436439 CRKP46108 304 aa13.46□□□□□ -0.25
HMGCL-204ENST00000436439 RFX5P48382 616 aaPredicted RBP13.46□□□□□ -0.25
HMGCL-204ENST00000436439 CHAF1AQ13111 956 aaPredicted RBP13.46□□□□□ -0.25
HMGCL-204ENST00000436439 SUPT20HL1Q3ZLR7 823 aa13.46□□□□□ -0.25
HMGCL-204ENST00000436439 NOM1Q5C9Z4 860 aaKnown RBP13.46□□□□□ -0.25
HMGCL-204ENST00000436439 IFNL1Q8IU54 200 aa13.46□□□□□ -0.25
HMGCL-204ENST00000436439 TEPSINQ96N21 525 aa13.46□□□□□ -0.25
HMGCL-204ENST00000436439 MANSC4A6NHS7 340 aaPredicted RBP13.45□□□□□ -0.26
HMGCL-204ENST00000436439 TCP10L2B9ZVM9 353 aa13.45□□□□□ -0.26
HMGCL-204ENST00000436439 ZBTB48P10074 688 aaPredicted RBP13.45□□□□□ -0.26
HMGCL-204ENST00000436439 FGFR2P21802 821 aa13.45□□□□□ -0.26
HMGCL-204ENST00000436439 BCAMP50895 628 aa13.45□□□□□ -0.26
HMGCL-204ENST00000436439 NUCB1Q02818 461 aa13.45□□□□□ -0.26
HMGCL-204ENST00000436439 SRGAP3O43295 1099 aa13.45□□□□□ -0.26
HMGCL-204ENST00000436439 FKTNO75072 461 aa13.45□□□□□ -0.26
HMGCL-204ENST00000436439 IREB2P48200 963 aaKnown RBP13.45□□□□□ -0.26
HMGCL-204ENST00000436439 CAVIN4Q5BKX8 364 aa13.45□□□□□ -0.26
HMGCL-204ENST00000436439 VPS37DQ86XT2 251 aa13.45□□□□□ -0.26
HMGCL-204ENST00000436439 ANKRD13AQ8IZ07 590 aa13.45□□□□□ -0.26
HMGCL-204ENST00000436439 TMEM39BQ9GZU3 492 aa13.45□□□□□ -0.26
HMGCL-204ENST00000436439 NOP58Q9Y2X3 529 aaKnown RBP13.45□□□□□ -0.26
HMGCL-204ENST00000436439 UNCXA6NJT0 531 aa13.44□□□□□ -0.26
HMGCL-204ENST00000436439 CACNB3P54284 484 aa13.44□□□□□ -0.26
HMGCL-204ENST00000436439 INHBEP58166 350 aa13.44□□□□□ -0.26
HMGCL-204ENST00000436439 TNFAIP1Q13829 316 aa13.44□□□□□ -0.26
HMGCL-204ENST00000436439 PKN2Q16513 984 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms