RNA–Protein interactions for RNA: ENST00000431116.2

HMGN1P38-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 38, humanhuman

BASIC

Gene HMGN1P38, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P38-201ENST00000431116 SPDYE2Q495Y8 402 aa12.69□□□□□ -0.38
HMGN1P38-201ENST00000431116 TBC1D22AQ8WUA7 517 aa12.69□□□□□ -0.38
HMGN1P38-201ENST00000431116 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.69□□□□□ -0.38
HMGN1P38-201ENST00000431116 PPP1R12BO60237 982 aaPredicted RBP12.68□□□□□ -0.38
HMGN1P38-201ENST00000431116 IFIT1P09914 478 aaKnown RBP12.68□□□□□ -0.38
HMGN1P38-201ENST00000431116 CRKP46108 304 aa12.68□□□□□ -0.38
HMGN1P38-201ENST00000431116 BCAMP50895 628 aa12.68□□□□□ -0.38
HMGN1P38-201ENST00000431116 RARSP54136 660 aaKnown RBP12.68□□□□□ -0.38
HMGN1P38-201ENST00000431116 TNFAIP1Q13829 316 aa12.68□□□□□ -0.38
HMGN1P38-201ENST00000431116 GRIK5Q16478 980 aa12.68□□□□□ -0.38
HMGN1P38-201ENST00000431116 SUPT20HL1Q3ZLR7 823 aa12.68□□□□□ -0.38
HMGN1P38-201ENST00000431116 LDLRAD1Q5T700 205 aa12.68□□□□□ -0.38
HMGN1P38-201ENST00000431116 SIL1Q9H173 461 aa12.68□□□□□ -0.38
HMGN1P38-201ENST00000431116 ZNF70Q9UC06 446 aaPredicted RBP12.68□□□□□ -0.38
HMGN1P38-201ENST00000431116 LRRFIP2Q9Y608 721 aaKnown RBP12.68□□□□□ -0.38
HMGN1P38-201ENST00000431116 SLC5A1P13866 664 aa12.67□□□□□ -0.38
HMGN1P38-201ENST00000431116 FGFR2P21802 821 aa12.67□□□□□ -0.38
HMGN1P38-201ENST00000431116 SREBF2Q12772 1141 aa12.67□□□□□ -0.38
HMGN1P38-201ENST00000431116 RASA3Q14644 834 aa12.67□□□□□ -0.38
HMGN1P38-201ENST00000431116 MAP3K11Q16584 847 aa12.67□□□□□ -0.38
HMGN1P38-201ENST00000431116 NBPF12Q5TAG4 269 aaPredicted RBP12.67□□□□□ -0.38
HMGN1P38-201ENST00000431116 SPRYD7Q5W111 196 aa12.67□□□□□ -0.38
HMGN1P38-201ENST00000431116 ATG9AQ7Z3C6 839 aa12.67□□□□□ -0.38
HMGN1P38-201ENST00000431116 DZIP1LQ8IYY4 767 aaKnown RBP12.67□□□□□ -0.38
HMGN1P38-201ENST00000431116 TDRD3Q9H7E2 651 aaKnown RBP12.67□□□□□ -0.38
HMGN1P38-201ENST00000431116 TCP10L2B9ZVM9 353 aa12.66□□□□□ -0.38
HMGN1P38-201ENST00000431116 IREB2P48200 963 aaKnown RBP12.66□□□□□ -0.38
HMGN1P38-201ENST00000431116 LPIN2Q92539 896 aa12.66□□□□□ -0.38
HMGN1P38-201ENST00000431116 TEKT1Q969V4 418 aa12.66□□□□□ -0.38
HMGN1P38-201ENST00000431116 CLMNQ96JQ2 1002 aa12.66□□□□□ -0.38
HMGN1P38-201ENST00000431116 MEIS3Q99687 375 aa12.66□□□□□ -0.38
HMGN1P38-201ENST00000431116 HDAC5Q9UQL6 1122 aa12.66□□□□□ -0.38
HMGN1P38-201ENST00000431116 MAST3O60307 1309 aa12.65□□□□□ -0.38
HMGN1P38-201ENST00000431116 CIAO1O76071 339 aa12.65□□□□□ -0.38
HMGN1P38-201ENST00000431116 TBC1D8O95759 1140 aa12.65□□□□□ -0.38
HMGN1P38-201ENST00000431116 TM4SF4P48230 202 aa12.65□□□□□ -0.38
HMGN1P38-201ENST00000431116 TNNI2P48788 182 aa12.65□□□□□ -0.38
HMGN1P38-201ENST00000431116 HDLBPQ00341 1268 aaKnown RBP12.65□□□□□ -0.38
HMGN1P38-201ENST00000431116 ATP2B3Q16720 1220 aa12.65□□□□□ -0.38
HMGN1P38-201ENST00000431116 CDAN1Q8IWY9 1227 aa12.65□□□□□ -0.38
HMGN1P38-201ENST00000431116 ARHGAP45Q92619 1136 aa12.65□□□□□ -0.38
HMGN1P38-201ENST00000431116 SLC10A4Q96EP9 437 aa12.65□□□□□ -0.38
HMGN1P38-201ENST00000431116 WNK4Q96J92 1243 aa12.65□□□□□ -0.38
HMGN1P38-201ENST00000431116 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
HMGN1P38-201ENST00000431116 ZBTB48P10074 688 aaPredicted RBP12.64□□□□□ -0.39
HMGN1P38-201ENST00000431116 IL15P40933 162 aaPredicted RBP12.64□□□□□ -0.39
HMGN1P38-201ENST00000431116 CACNB3P54284 484 aa12.64□□□□□ -0.39
HMGN1P38-201ENST00000431116 INTS3Q68E01 1043 aaKnown RBP12.64□□□□□ -0.39
HMGN1P38-201ENST00000431116 CTU1Q7Z7A3 348 aaKnown RBP12.64□□□□□ -0.39
HMGN1P38-201ENST00000431116 TEPSINQ96N21 525 aa12.64□□□□□ -0.39
HMGN1P38-201ENST00000431116 TMEM39BQ9GZU3 492 aa12.64□□□□□ -0.39
HMGN1P38-201ENST00000431116 TMOD2Q9NZR1 351 aa12.64□□□□□ -0.39
HMGN1P38-201ENST00000431116 CEP126Q9P2H0 1117 aa12.64□□□□□ -0.39
HMGN1P38-201ENST00000431116 PA2G4Q9UQ80 394 aaKnown RBP12.64□□□□□ -0.39
HMGN1P38-201ENST00000431116 AK9Q5TCS8 1911 aa12.64□□□□□ -0.39
HMGN1P38-201ENST00000431116 MANSC4A6NHS7 340 aaPredicted RBP12.63□□□□□ -0.39
HMGN1P38-201ENST00000431116 UNCXA6NJT0 531 aa12.63□□□□□ -0.39
HMGN1P38-201ENST00000431116 USP2O75604 605 aaPredicted RBP12.63□□□□□ -0.39
HMGN1P38-201ENST00000431116 TRIM27P14373 513 aa12.63□□□□□ -0.39
HMGN1P38-201ENST00000431116 ANKRD13AQ8IZ07 590 aa12.63□□□□□ -0.39
HMGN1P38-201ENST00000431116 WDR66Q8TBY9 1149 aa12.63□□□□□ -0.39
HMGN1P38-201ENST00000431116 ZNF296Q8WUU4 475 aaPredicted RBP12.63□□□□□ -0.39
HMGN1P38-201ENST00000431116 FRAT1Q92837 279 aaPredicted RBP12.63□□□□□ -0.39
HMGN1P38-201ENST00000431116 ZDHHC15Q96MV8 337 aa12.63□□□□□ -0.39
HMGN1P38-201ENST00000431116 COPRSQ9NQ92 184 aa12.63□□□□□ -0.39
HMGN1P38-201ENST00000431116 SUGT1Q9Y2Z0 365 aa12.63□□□□□ -0.39
HMGN1P38-201ENST00000431116 MYH2Q9UKX2 1941 aa12.62□□□□□ -0.39
HMGN1P38-201ENST00000431116 IPO8O15397 1037 aaKnown RBP12.62□□□□□ -0.39
HMGN1P38-201ENST00000431116 SRGAP3O43295 1099 aa12.62□□□□□ -0.39
HMGN1P38-201ENST00000431116 BCAR3O75815 825 aa12.62□□□□□ -0.39
HMGN1P38-201ENST00000431116 GNAI3P08754 354 aa12.62□□□□□ -0.39
HMGN1P38-201ENST00000431116 ELP3Q9H9T3 547 aa12.62□□□□□ -0.39
HMGN1P38-201ENST00000431116 GNL3LQ9NVN8 582 aaKnown RBP12.62□□□□□ -0.39
HMGN1P38-201ENST00000431116 TNNQ9UQP3 1299 aa12.62□□□□□ -0.39
HMGN1P38-201ENST00000431116 DOCK2Q92608 1830 aa12.61□□□□□ -0.39
HMGN1P38-201ENST00000431116 GPR25O00155 361 aa12.61□□□□□ -0.39
HMGN1P38-201ENST00000431116 ALDH1A1P00352 501 aa12.61□□□□□ -0.39
HMGN1P38-201ENST00000431116 HNRNPUQ00839 825 aaKnown RBP eCLIP12.61□□□□□ -0.39
HMGN1P38-201ENST00000431116 DIXDC1Q155Q3 683 aa12.61□□□□□ -0.39
HMGN1P38-201ENST00000431116 APOBEC3HQ6NTF7 200 aaKnown RBP12.61□□□□□ -0.39
HMGN1P38-201ENST00000431116 HHIPL2Q6UWX4 724 aa12.61□□□□□ -0.39
HMGN1P38-201ENST00000431116 ATF7IPQ6VMQ6 1270 aa12.61□□□□□ -0.39
HMGN1P38-201ENST00000431116 IFNL1Q8IU54 200 aa12.61□□□□□ -0.39
HMGN1P38-201ENST00000431116 MIER1Q8N108 512 aa12.61□□□□□ -0.39
HMGN1P38-201ENST00000431116 CLUAP1Q96AJ1 413 aa12.61□□□□□ -0.39
HMGN1P38-201ENST00000431116 CFHR5Q9BXR6 569 aa12.61□□□□□ -0.39
HMGN1P38-201ENST00000431116 RPAP1Q9BWH6 1393 aaPredicted RBP12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 IGF2BP3O00425 579 aaKnown RBP eCLIP12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 SEMA3EO15041 775 aa12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 PRDX5P30044 214 aa12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 ADORA1P30542 326 aa12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 GJA5P36382 358 aa12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 PHKA1P46020 1223 aa12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 INHBEP58166 350 aa12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 MTX1Q13505 466 aa12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 NOM1Q5C9Z4 860 aaKnown RBP12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 DIEXFQ68CQ4 756 aaKnown RBP12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 OPTNQ96CV9 577 aa12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 MRIQ9BWK5 157 aa12.6□□□□□ -0.39
HMGN1P38-201ENST00000431116 R3HDMLQ9H3Y0 253 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms