RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 SREBF2Q12772 1141 aa20.46■□□□□ 0.87
TTC28-202ENST00000431039 POLA2Q14181 598 aa20.46■□□□□ 0.87
TTC28-202ENST00000431039 LMBR1LQ6UX01 489 aa20.46■□□□□ 0.87
TTC28-202ENST00000431039 SSH3Q8TE77 659 aa20.46■□□□□ 0.87
TTC28-202ENST00000431039 ZNF594Q96JF6 807 aaPredicted RBP20.46■□□□□ 0.87
TTC28-202ENST00000431039 PNMA6EA0A0J9YXQ4 647 aa20.45■□□□□ 0.86
TTC28-202ENST00000431039 CLRN2A0PK11 232 aa20.45■□□□□ 0.86
TTC28-202ENST00000431039 GPR25O00155 361 aa20.45■□□□□ 0.86
TTC28-202ENST00000431039 SRGAP3O43295 1099 aa20.45■□□□□ 0.86
TTC28-202ENST00000431039 TAF7LQ5H9L4 462 aa20.45■□□□□ 0.86
TTC28-202ENST00000431039 C15orf52Q6ZUT6 534 aaKnown RBP20.45■□□□□ 0.86
TTC28-202ENST00000431039 ZNF804AQ7Z570 1209 aa20.45■□□□□ 0.86
TTC28-202ENST00000431039 DEFB129Q9H1M3 183 aa20.45■□□□□ 0.86
TTC28-202ENST00000431039 SSC5DA1L4H1 1573 aa20.45■□□□□ 0.86
TTC28-202ENST00000431039 LAMB1P07942 1786 aa20.44■□□□□ 0.86
TTC28-202ENST00000431039 CFAP100Q494V2 611 aa20.44■□□□□ 0.86
TTC28-202ENST00000431039 LDLRAD1Q5T700 205 aa20.44■□□□□ 0.86
TTC28-202ENST00000431039 SPRYD7Q5W111 196 aa20.44■□□□□ 0.86
TTC28-202ENST00000431039 CENPQQ7L2Z9 268 aaPredicted RBP20.44■□□□□ 0.86
TTC28-202ENST00000431039 ARAP2Q8WZ64 1704 aa20.44■□□□□ 0.86
TTC28-202ENST00000431039 OTOFQ9HC10 1997 aa20.43■□□□□ 0.86
TTC28-202ENST00000431039 IL1R1P14778 569 aa20.43■□□□□ 0.86
TTC28-202ENST00000431039 CCDC57Q2TAC2 916 aa20.43■□□□□ 0.86
TTC28-202ENST00000431039 R3HDMLQ9H3Y0 253 aa20.43■□□□□ 0.86
TTC28-202ENST00000431039 VEZTQ9HBM0 779 aa20.43■□□□□ 0.86
TTC28-202ENST00000431039 CNNM1Q9NRU3 951 aa20.43■□□□□ 0.86
TTC28-202ENST00000431039 AOX1Q06278 1338 aa20.43■□□□□ 0.86
TTC28-202ENST00000431039 PKN2Q16513 984 aaKnown RBP20.42■□□□□ 0.86
TTC28-202ENST00000431039 LDHAL6AQ6ZMR3 332 aa20.42■□□□□ 0.86
TTC28-202ENST00000431039 MTMR14Q8NCE2 650 aa20.42■□□□□ 0.86
TTC28-202ENST00000431039 DCTPP1Q9H773 170 aa20.42■□□□□ 0.86
TTC28-202ENST00000431039 SPDYE2BA6NHP3 402 aa20.41■□□□□ 0.86
TTC28-202ENST00000431039 MYO1BO43795 1136 aa20.41■□□□□ 0.86
TTC28-202ENST00000431039 SPDYE6P0CI01 402 aa20.41■□□□□ 0.86
TTC28-202ENST00000431039 RBM5P52756 815 aaKnown RBP eCLIP20.41■□□□□ 0.86
TTC28-202ENST00000431039 SMC5Q8IY18 1101 aa20.41■□□□□ 0.86
TTC28-202ENST00000431039 GCC1Q96CN9 775 aa20.41■□□□□ 0.86
TTC28-202ENST00000431039 SLC10A4Q96EP9 437 aa20.41■□□□□ 0.86
TTC28-202ENST00000431039 CLMNQ96JQ2 1002 aa20.41■□□□□ 0.86
TTC28-202ENST00000431039 PRMT6Q96LA8 375 aaPredicted RBP20.41■□□□□ 0.86
TTC28-202ENST00000431039 FKTNO75072 461 aa20.4■□□□□ 0.86
TTC28-202ENST00000431039 RFX5P48382 616 aaPredicted RBP20.4■□□□□ 0.86
TTC28-202ENST00000431039 PPP2R3BQ9Y5P8 575 aa20.4■□□□□ 0.86
TTC28-202ENST00000431039 PPP1R12BO60237 982 aaPredicted RBP20.39■□□□□ 0.85
TTC28-202ENST00000431039 FKBP1AP62942 108 aaKnown RBP20.39■□□□□ 0.85
TTC28-202ENST00000431039 NOM1Q5C9Z4 860 aaKnown RBP20.39■□□□□ 0.85
TTC28-202ENST00000431039 WNK4Q96J92 1243 aa20.39■□□□□ 0.85
TTC28-202ENST00000431039 NOP58Q9Y2X3 529 aaKnown RBP20.39■□□□□ 0.85
TTC28-202ENST00000431039 MANSC4A6NHS7 340 aaPredicted RBP20.38■□□□□ 0.85
TTC28-202ENST00000431039 MAP3K11Q16584 847 aa20.38■□□□□ 0.85
TTC28-202ENST00000431039 NBPF12Q5TAG4 269 aaPredicted RBP20.38■□□□□ 0.85
TTC28-202ENST00000431039 FBXO46Q6PJ61 603 aaPredicted RBP20.38■□□□□ 0.85
TTC28-202ENST00000431039 CFHR5Q9BXR6 569 aa20.38■□□□□ 0.85
TTC28-202ENST00000431039 COPRSQ9NQ92 184 aa20.38■□□□□ 0.85
TTC28-202ENST00000431039 GYG1P46976 350 aa20.37■□□□□ 0.85
TTC28-202ENST00000431039 SUPT20HL1Q3ZLR7 823 aa20.37■□□□□ 0.85
TTC28-202ENST00000431039 IFNL1Q8IU54 200 aa20.37■□□□□ 0.85
TTC28-202ENST00000431039 SURF6O75683 361 aaKnown RBP20.36■□□□□ 0.85
TTC28-202ENST00000431039 ALDH1A1P00352 501 aa20.36■□□□□ 0.85
TTC28-202ENST00000431039 ZBTB48P10074 688 aaPredicted RBP20.36■□□□□ 0.85
TTC28-202ENST00000431039 RASA3Q14644 834 aa20.36■□□□□ 0.85
TTC28-202ENST00000431039 HSP90AB4PQ58FF6 505 aa20.36■□□□□ 0.85
TTC28-202ENST00000431039 MFSD14BQ5SR56 506 aa20.36■□□□□ 0.85
TTC28-202ENST00000431039 PUS3Q9BZE2 481 aaKnown RBP20.36■□□□□ 0.85
TTC28-202ENST00000431039 FAM205AQ6ZU69 1335 aa20.35■□□□□ 0.85
TTC28-202ENST00000431039 IGF2BP3O00425 579 aaKnown RBP eCLIP20.35■□□□□ 0.85
TTC28-202ENST00000431039 RAB11FIP3O75154 756 aa20.35■□□□□ 0.85
TTC28-202ENST00000431039 TTF2Q9UNY4 1162 aaKnown RBP20.35■□□□□ 0.85
TTC28-202ENST00000431039 USP2O75604 605 aaPredicted RBP20.34■□□□□ 0.85
TTC28-202ENST00000431039 HIBADHP31937 336 aaKnown RBP20.34■□□□□ 0.85
TTC28-202ENST00000431039 GJA5P36382 358 aa20.34■□□□□ 0.85
TTC28-202ENST00000431039 IREB2P48200 963 aaKnown RBP20.34■□□□□ 0.85
TTC28-202ENST00000431039 UBE4AQ14139 1066 aa20.34■□□□□ 0.85
TTC28-202ENST00000431039 TDRD7Q8NHU6 1098 aaKnown RBP20.34■□□□□ 0.85
TTC28-202ENST00000431039 FBXO3Q9UK99 471 aa20.34■□□□□ 0.85
TTC28-202ENST00000431039 PA2G4Q9UQ80 394 aaKnown RBP20.34■□□□□ 0.85
TTC28-202ENST00000431039 MYH13Q9UKX3 1938 aa20.33■□□□□ 0.85
TTC28-202ENST00000431039 INHBEP58166 350 aa20.33■□□□□ 0.85
TTC28-202ENST00000431039 G3BP1Q13283 466 aaKnown RBP eCLIP20.33■□□□□ 0.85
TTC28-202ENST00000431039 SPDYE2Q495Y8 402 aa20.33■□□□□ 0.85
TTC28-202ENST00000431039 FAM84BQ96KN1 310 aaPredicted RBP20.33■□□□□ 0.85
TTC28-202ENST00000431039 TDRD3Q9H7E2 651 aaKnown RBP20.33■□□□□ 0.85
TTC28-202ENST00000431039 ZNF70Q9UC06 446 aaPredicted RBP20.33■□□□□ 0.85
TTC28-202ENST00000431039 EXOC6BQ9Y2D4 811 aa20.33■□□□□ 0.85
TTC28-202ENST00000431039 TRIM17Q9Y577 477 aa20.33■□□□□ 0.85
TTC28-202ENST00000431039 CIAO1O76071 339 aa20.32■□□□□ 0.84
TTC28-202ENST00000431039 ERC1Q8IUD2 1116 aa20.32■□□□□ 0.84
TTC28-202ENST00000431039 CDAN1Q8IWY9 1227 aa20.32■□□□□ 0.84
TTC28-202ENST00000431039 KLHDC4Q8TBB5 520 aa20.32■□□□□ 0.84
TTC28-202ENST00000431039 IQSEC3Q9UPP2 1182 aaPredicted RBP20.32■□□□□ 0.84
TTC28-202ENST00000431039 NUCB1Q02818 461 aa20.31■□□□□ 0.84
TTC28-202ENST00000431039 TNFAIP1Q13829 316 aa20.31■□□□□ 0.84
TTC28-202ENST00000431039 ANKRD13AQ8IZ07 590 aa20.31■□□□□ 0.84
TTC28-202ENST00000431039 ELP3Q9H9T3 547 aa20.31■□□□□ 0.84
TTC28-202ENST00000431039 SERPINA10Q9UK55 444 aa20.31■□□□□ 0.84
TTC28-202ENST00000431039 HTTP42858 3142 aa20.31■□□□□ 0.84
TTC28-202ENST00000431039 UNCXA6NJT0 531 aa20.3■□□□□ 0.84
TTC28-202ENST00000431039 TCP10L2B9ZVM9 353 aa20.3■□□□□ 0.84
TTC28-202ENST00000431039 EYA2O00167 538 aa20.3■□□□□ 0.84
TTC28-202ENST00000431039 CRKP46108 304 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms