RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SKAP1Q86WV1 359 aa13.33□□□□□ -0.28
CHD4-202ENST00000430771 OGFOD1Q8N543 542 aa13.33□□□□□ -0.28
CHD4-202ENST00000430771 CERS5Q8N5B7 392 aa13.33□□□□□ -0.28
CHD4-202ENST00000430771 ANTXR1Q9H6X2 564 aa13.33□□□□□ -0.28
CHD4-202ENST00000430771 PIH1D3Q9NQM4 214 aaKnown RBP13.33□□□□□ -0.28
CHD4-202ENST00000430771 TTF2Q9UNY4 1162 aaKnown RBP13.33□□□□□ -0.28
CHD4-202ENST00000430771 ECM29Q5VYK3 1845 aa13.33□□□□□ -0.28
CHD4-202ENST00000430771 ADAMTSL1Q8N6G6 1762 aa13.32□□□□□ -0.28
CHD4-202ENST00000430771 GLTPD2A6NH11 291 aa13.32□□□□□ -0.28
CHD4-202ENST00000430771 MAP4K4O95819 1239 aaPredicted RBP13.32□□□□□ -0.28
CHD4-202ENST00000430771 GMPSP49915 693 aaPredicted RBP13.32□□□□□ -0.28
CHD4-202ENST00000430771 TBC1D9Q6ZT07 1266 aa13.32□□□□□ -0.28
CHD4-202ENST00000430771 TICAM2Q86XR7 235 aa13.32□□□□□ -0.28
CHD4-202ENST00000430771 KIAA0825Q8IV33 1275 aa13.32□□□□□ -0.28
CHD4-202ENST00000430771 DPF2Q92785 391 aa13.32□□□□□ -0.28
CHD4-202ENST00000430771 RILPL2Q969X0 211 aa13.32□□□□□ -0.28
CHD4-202ENST00000430771 EDC3Q96F86 508 aaKnown RBP13.32□□□□□ -0.28
CHD4-202ENST00000430771 L3MBTL3Q96JM7 780 aaPredicted RBP13.32□□□□□ -0.28
CHD4-202ENST00000430771 MXD3Q9BW11 206 aa13.32□□□□□ -0.28
CHD4-202ENST00000430771 F8W031 263 aaPredicted RBP13.31□□□□□ -0.28
CHD4-202ENST00000430771 HIP1O00291 1037 aa13.31□□□□□ -0.28
CHD4-202ENST00000430771 ZFYP08048 801 aaPredicted RBP13.31□□□□□ -0.28
CHD4-202ENST00000430771 USP17L8P0C7I0 530 aa13.31□□□□□ -0.28
CHD4-202ENST00000430771 HDLBPQ00341 1268 aaKnown RBP13.31□□□□□ -0.28
CHD4-202ENST00000430771 NAA16Q6N069 864 aaPredicted RBP13.31□□□□□ -0.28
CHD4-202ENST00000430771 GMLQ99445 158 aa13.31□□□□□ -0.28
CHD4-202ENST00000430771 ZBTB12Q9Y330 459 aaPredicted RBP13.31□□□□□ -0.28
CHD4-202ENST00000430771 IQCA1LA6NCM1 817 aa13.3□□□□□ -0.28
CHD4-202ENST00000430771 DDNO94850 711 aaPredicted RBP13.3□□□□□ -0.28
CHD4-202ENST00000430771 LDHCP07864 332 aa13.3□□□□□ -0.28
CHD4-202ENST00000430771 SCNN1DP51172 638 aa13.3□□□□□ -0.28
CHD4-202ENST00000430771 MECOMQ03112 1051 aa13.3□□□□□ -0.28
CHD4-202ENST00000430771 MICALL2Q8IY33 904 aa13.3□□□□□ -0.28
CHD4-202ENST00000430771 MAGEB6Q8N7X4 407 aa13.3□□□□□ -0.28
CHD4-202ENST00000430771 TEKT1Q969V4 418 aa13.3□□□□□ -0.28
CHD4-202ENST00000430771 NSUN4Q96CB9 384 aaKnown RBP13.3□□□□□ -0.28
CHD4-202ENST00000430771 NOL10Q9BSC4 688 aaKnown RBP13.3□□□□□ -0.28
CHD4-202ENST00000430771 GPRC5DQ9NZD1 345 aa13.3□□□□□ -0.28
CHD4-202ENST00000430771 SERPINA10Q9UK55 444 aa13.3□□□□□ -0.28
CHD4-202ENST00000430771 MROH7-TTC4A0A0A0MT08 1334 aa13.3□□□□□ -0.28
CHD4-202ENST00000430771 H7C1D1 291 aa13.29□□□□□ -0.28
CHD4-202ENST00000430771 PDE6AP16499 860 aa13.29□□□□□ -0.28
CHD4-202ENST00000430771 SDSP20132 328 aa13.29□□□□□ -0.28
CHD4-202ENST00000430771 ADD2P35612 726 aa13.29□□□□□ -0.28
CHD4-202ENST00000430771 UBE3CQ15386 1083 aa13.29□□□□□ -0.28
CHD4-202ENST00000430771 SLC9C2Q5TAH2 1124 aa13.29□□□□□ -0.28
CHD4-202ENST00000430771 CERS3Q8IU89 383 aa13.29□□□□□ -0.28
CHD4-202ENST00000430771 DIAPH3Q9NSV4 1193 aa13.29□□□□□ -0.28
CHD4-202ENST00000430771 HACL1Q9UJ83 578 aa13.29□□□□□ -0.28
CHD4-202ENST00000430771 GAKO14976 1311 aa13.29□□□□□ -0.28
CHD4-202ENST00000430771 RNF113AO15541 343 aaKnown RBP13.28□□□□□ -0.28
CHD4-202ENST00000430771 CRKP46108 304 aa13.28□□□□□ -0.28
CHD4-202ENST00000430771 RBM5P52756 815 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHD4-202ENST00000430771 ZNF280AP59817 542 aaPredicted RBP13.28□□□□□ -0.28
CHD4-202ENST00000430771 DIXDC1Q155Q3 683 aa13.28□□□□□ -0.28
CHD4-202ENST00000430771 GRIK5Q16478 980 aa13.28□□□□□ -0.28
CHD4-202ENST00000430771 CASC1Q6TDU7 716 aa13.28□□□□□ -0.28
CHD4-202ENST00000430771 HHIPL2Q6UWX4 724 aa13.28□□□□□ -0.28
CHD4-202ENST00000430771 APPBP2Q92624 585 aa13.28□□□□□ -0.28
CHD4-202ENST00000430771 MRIQ9BWK5 157 aa13.28□□□□□ -0.28
CHD4-202ENST00000430771 CNOT7Q9UIV1 285 aaKnown RBP13.28□□□□□ -0.28
CHD4-202ENST00000430771 ZNF532Q9HCE3 1301 aa13.28□□□□□ -0.28
CHD4-202ENST00000430771 CDC45O75419 566 aa13.27□□□□□ -0.29
CHD4-202ENST00000430771 BAG3O95817 575 aa13.27□□□□□ -0.29
CHD4-202ENST00000430771 CYP7A1P22680 504 aa13.27□□□□□ -0.29
CHD4-202ENST00000430771 KIF4BQ2VIQ3 1234 aa13.27□□□□□ -0.29
CHD4-202ENST00000430771 CFAP100Q494V2 611 aa13.27□□□□□ -0.29
CHD4-202ENST00000430771 ZDHHC15Q96MV8 337 aa13.27□□□□□ -0.29
CHD4-202ENST00000430771 MYOZ2Q9NPC6 264 aa13.27□□□□□ -0.29
CHD4-202ENST00000430771 ADARB2Q9NS39 739 aaKnown RBP13.27□□□□□ -0.29
CHD4-202ENST00000430771 DAGLAQ9Y4D2 1042 aa13.27□□□□□ -0.29
CHD4-202ENST00000430771 RAD50Q92878 1312 aa13.27□□□□□ -0.29
CHD4-202ENST00000430771 FOCADQ5VW36 1801 aa13.27□□□□□ -0.29
CHD4-202ENST00000430771 NAV1Q8NEY1 1877 aa13.27□□□□□ -0.29
CHD4-202ENST00000430771 MYO1BO43795 1136 aa13.26□□□□□ -0.29
CHD4-202ENST00000430771 PLCG2P16885 1265 aa13.26□□□□□ -0.29
CHD4-202ENST00000430771 BTDP43251 543 aa13.26□□□□□ -0.29
CHD4-202ENST00000430771 DLGAP5Q15398 846 aa13.26□□□□□ -0.29
CHD4-202ENST00000430771 MTMR14Q8NCE2 650 aa13.26□□□□□ -0.29
CHD4-202ENST00000430771 FAM163AQ96GL9 167 aaPredicted RBP13.26□□□□□ -0.29
CHD4-202ENST00000430771 CDK5RAP2Q96SN8 1893 aa13.25□□□□□ -0.29
CHD4-202ENST00000430771 TCRBV5S4A2TA0A5A2 114 aa13.25□□□□□ -0.29
CHD4-202ENST00000430771 SPDYE2BA6NHP3 402 aa13.25□□□□□ -0.29
CHD4-202ENST00000430771 SPDYE6P0CI01 402 aa13.25□□□□□ -0.29
CHD4-202ENST00000430771 EPHX2P34913 555 aa13.25□□□□□ -0.29
CHD4-202ENST00000430771 ZMYM1Q5SVZ6 1142 aa13.25□□□□□ -0.29
CHD4-202ENST00000430771 ZNF384Q8TF68 577 aa13.25□□□□□ -0.29
CHD4-202ENST00000430771 RUFY2Q8WXA3 655 aa13.25□□□□□ -0.29
CHD4-202ENST00000430771 AIDAQ96BJ3 306 aa13.25□□□□□ -0.29
CHD4-202ENST00000430771 HELLSQ9NRZ9 838 aa13.25□□□□□ -0.29
CHD4-202ENST00000430771 TMOD2Q9NZR1 351 aa13.25□□□□□ -0.29
CHD4-202ENST00000430771 GPR75-ASB3A0A0A6YYF3 556 aa13.24□□□□□ -0.29
CHD4-202ENST00000430771 MAGEB6P1A0A0J9YX57 407 aa13.24□□□□□ -0.29
CHD4-202ENST00000430771 SHTN1A0MZ66 631 aa13.24□□□□□ -0.29
CHD4-202ENST00000430771 EPS15P42566 896 aa13.24□□□□□ -0.29
CHD4-202ENST00000430771 MFAP1P55081 439 aaKnown RBP13.24□□□□□ -0.29
CHD4-202ENST00000430771 NMIQ13287 307 aaPredicted RBP13.24□□□□□ -0.29
CHD4-202ENST00000430771 TBC1D10BQ4KMP7 808 aaPredicted RBP13.24□□□□□ -0.29
CHD4-202ENST00000430771 USP50Q70EL3 339 aaPredicted RBP13.24□□□□□ -0.29
CHD4-202ENST00000430771 ADGRA1Q86SQ6 560 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms